Entry: PS01090

General information about the entry

Entry name [info] TATD_2
Accession [info] PS01090
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1995 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00836

Name and characterization of the entry

Description [info] TatD deoxyribonuclease family signature 2.
Pattern [info]
P-[LIVM]-x-[LIVM]-H-x-R-x-[TA]-x-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 36
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 84.62 %
Recall (true positives / (true positives + false negatives)) 37.93 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

TATD2_HUMAN (Q93075), TATD_ECOLI  (P27859), TATD_ENT38  (A4WFX9), 
TATD_ENTLS  (E3G381), TATD_ERWAE  (D4ICL5), TATD_ERWBE  (D8MKW4), 
TATD_ERWT9  (B2VG45), TATD_ESCF3  (B7LTZ5), TATD_KLEP3  (B5XYH5), 
TATD_PANAM  (D4GGR2), TATD_PANSA  (E6WHK1), TATD_RAHSY  (E8XYF5), 
TATD_SALTY  (Q9L6M2), TATD_SHIF8  (Q0SZ31), TATD_YERPY  (B1JP69), 
Y017_UREPA  (Q9PRC8), Y081_HAEIN  (P44500), Y355_BUCAI  (P57436), 
Y454_HAEIN  (P44718), YABD_BACSU  (P37545), YBF5_YEAST  (P34220), 
YJJV_ECOLI  (P39408)
» More

UniProtKB/Swiss-Prot
False negative sequences
36 sequences

TAT3A_XENLA (Q05AV0), TATD1_BOVIN (Q148G4), TATD1_DANRE (Q6GML7), 
TATD1_ENCCU (Q8SW70), TATD1_ENTBH (B7XJI2), TATD1_HUMAN (Q6P1N9), 
TATD1_MOUSE (Q6P8M1), TATD1_NOSCE (C4VAS3), TATD3_BOVIN (A1A4M4), 
TATD3_DANRE (Q503T5), TATD3_HUMAN (Q17R31), TATD3_MOUSE (Q3U1C6), 
TATD_CITK8  (A8ACY8), TATD_CITRI  (D2TUZ4), TATD_CROS8  (A7MQN1), 
TATD_DICD3  (E0SLH6), TATD_DICDC  (C6C4V4), TATD_EDWTE  (D0Z9R0), 
TATD_PANVC  (E1SKR8), TATD_PECAS  (Q6DAQ1), TATD_PECCP  (C6DI71), 
TATD_PECWW  (D0KC77), TATD_SERP5  (A8G8C4), TATD_SICTZ  (C9XTA5), 
Y009_MYCGE  (P47255), Y009_MYCPN  (P78005), Y1582_METJA (Q58977), 
Y1664_HAEIN (P45305), Y1786_SYNY3 (P73335), Y325_BUCBP  (Q89AG7), 
Y343_BUCAP  (Q8K9J1), Y761_METJA  (Q58171), YCFH_ECO57  (P0AFQ9), 
YCFH_ECOL6  (P0AFQ8), YCFH_ECOLI  (P0AFQ7), YNF8_SCHPO  (Q9UUF1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

YMES_GEOSE  (P23918)

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

CL074_HUMAN (Q32Q52), GLGE_CORGL  (Q8NR39), TOF1_EMENI  (Q5AXH3), 
TOF1_PHANO  (Q0UJF3)
» More

PDB
[Detailed view]
4 PDB

1XWY; 1ZZM; 4P5U; 4PE8

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