Entry: PS01090

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General information about the entry

Entry name [info] TATD_2
Accession [info] PS01090
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1995 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00836

Name and characterization of the entry

Description [info] TatD deoxyribonuclease family signature 2.
Pattern [info]
P-[LIVM]-x-[LIVM]-H-x-R-x-[TA]-x-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 26 in 26 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 36
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 84.62 %
Recall (true positives / (true positives + false negatives)) 37.93 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

TATD2_HUMAN (Q93075), TATD_ECOLI  (P27859), TATD_ENT38  (A4WFX9), 
TATD_ENTLS  (E3G381), TATD_ERWAE  (D4ICL5), TATD_ERWBE  (D8MKW4), 
TATD_ERWT9  (B2VG45), TATD_ESCF3  (B7LTZ5), TATD_KLEP3  (B5XYH5), 
TATD_PANAM  (D4GGR2), TATD_PANSA  (E6WHK1), TATD_RAHSY  (E8XYF5), 
TATD_SALTY  (Q9L6M2), TATD_SHIF8  (Q0SZ31), TATD_YERPY  (B1JP69), 
Y017_UREPA  (Q9PRC8), Y081_HAEIN  (P44500), Y355_BUCAI  (P57436), 
Y454_HAEIN  (P44718), YABD_BACSU  (P37545), YBF5_YEAST  (P34220), 
YJJV_ECOLI  (P39408)
» More

UniProtKB/Swiss-Prot
False negative sequences
36 sequences

TAT3A_XENLA (Q05AV0), TATD1_BOVIN (Q148G4), TATD1_DANRE (Q6GML7), 
TATD1_ENCCU (Q8SW70), TATD1_ENTBH (B7XJI2), TATD1_HUMAN (Q6P1N9), 
TATD1_MOUSE (Q6P8M1), TATD1_NOSCE (C4VAS3), TATD3_BOVIN (A1A4M4), 
TATD3_DANRE (Q503T5), TATD3_HUMAN (Q17R31), TATD3_MOUSE (Q3U1C6), 
TATD_CITK8  (A8ACY8), TATD_CITRI  (D2TUZ4), TATD_CROS8  (A7MQN1), 
TATD_CROTZ  (C9XTA5), TATD_DICD3  (E0SLH6), TATD_DICDC  (C6C4V4), 
TATD_EDWTE  (D0Z9R0), TATD_PANVC  (E1SKR8), TATD_PECAS  (Q6DAQ1), 
TATD_PECCP  (C6DI71), TATD_PECWW  (D0KC77), TATD_SERP5  (A8G8C4), 
Y009_MYCGE  (P47255), Y009_MYCPN  (P78005), Y1582_METJA (Q58977), 
Y1664_HAEIN (P45305), Y1786_SYNY3 (P73335), Y325_BUCBP  (Q89AG7), 
Y343_BUCAP  (Q8K9J1), Y761_METJA  (Q58171), YCFH_ECO57  (P0AFQ9), 
YCFH_ECOL6  (P0AFQ8), YCFH_ECOLI  (P0AFQ7), YNF8_SCHPO  (Q9UUF1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

YMES_GEOSE  (P23918)

		
UniProtKB/Swiss-Prot
False positive sequences
4 sequences

CL074_HUMAN (Q32Q52), GLGE_CORGL  (Q8NR39), TOF1_EMENI  (Q5AXH3), 
TOF1_PHANO  (Q0UJF3)
» More

PDB
[Detailed view]
2 PDB

1XWY; 1ZZM

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