Entry: PS01091

General information about the entry

Entry name [info] TATD_3
Accession [info] PS01091
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00836

Name and characterization of the entry

Description [info] TatD deoxyribonuclease family signature 3.
Pattern [info]
[LVSAT]-[LIVA]-x(2)-[LIVMT]-[PSD]-x(3)-[LI]-[LIVMT]-[LIVMST]-E-T-D-x-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 75.41 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

TATD1_BOVIN (Q148G4), TATD1_ENTBH (B7XJI2), TATD1_HUMAN (Q6P1N9), 
TATD1_MOUSE (Q6P8M1), TATD1_NOSCE (C4VAS3), TATD1_XENLA (Q640V9), 
TATD2_HUMAN (Q93075), TATD_CITK8  (A8ACY8), TATD_CITRI  (D2TUZ4), 
TATD_CROS8  (A7MQN1), TATD_DICD3  (E0SLH6), TATD_DICDC  (C6C4V4), 
TATD_ECOLI  (P27859), TATD_EDWTE  (D0Z9R0), TATD_ENT38  (A4WFX9), 
TATD_ERWAE  (D4ICL5), TATD_ESCF3  (B7LTZ5), TATD_KLEP3  (B5XYH5), 
TATD_PANSA  (E6WHK1), TATD_PANVC  (E1SKR8), TATD_PECAS  (Q6DAQ1), 
TATD_PECCP  (C6DI71), TATD_PECWW  (D0KC77), TATD_SALTY  (Q9L6M2), 
TATD_SERP5  (A8G8C4), TATD_SHIF8  (Q0SZ31), TATD_SICTZ  (C9XTA5), 
TATD_YERPY  (B1JP69), Y009_MYCGE  (P47255), Y009_MYCPN  (P78005), 
Y017_UREPA  (Q9PRC8), Y081_HAEIN  (P44500), Y1582_METJA (Q58977), 
Y1664_HAEIN (P45305), Y1786_SYNY3 (P73335), Y325_BUCBP  (Q89AG7), 
Y343_BUCAP  (Q8K9J1), Y355_BUCAI  (P57436), Y454_HAEIN  (P44718), 
YABD_BACSU  (P37545), YBF5_YEAST  (P34220), YCFH_ECO57  (P0AFQ9), 
YCFH_ECOL6  (P0AFQ8), YCFH_ECOLI  (P0AFQ7), YJJV_ECOLI  (P39408), 
YM8C_YEAST  (P38430)
» More

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

TAT3A_XENLA (Q05AV0), TAT3B_XENLA (Q6GPM3), TATD1_DANRE (Q6GML7), 
TATD1_ENCCU (Q8SW70), TATD3_BOVIN (A1A4M4), TATD3_DANRE (Q503T5), 
TATD3_HUMAN (Q17R31), TATD3_MOUSE (Q3U1C6), TATD_ENTLS  (E3G381), 
TATD_ERWBE  (D8MKW4), TATD_ERWT9  (B2VG45), TATD_PANAM  (D4GGR2), 
TATD_RAHSY  (E8XYF5), Y761_METJA  (Q58171), YNF8_SCHPO  (Q9UUF1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

YMES_GEOSE  (P23918)

		
PDB
[Detailed view]
6 PDB

1XWY; 1YIX; 1ZZM; 2XIO; 4P5U; 4PE8

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