Entry: PS01091

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General information about the entry

Entry name [info] TATD_3
Accession [info] PS01091
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00836

Name and characterization of the entry

Description [info] TatD deoxyribonuclease family signature 3.
Pattern [info]
[LVSAT]-[LIVA]-x(2)-[LIVMT]-[PSD]-x(3)-[LI]-[LIVMT]-[LIVMST]-E-T-D-x-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 15
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 75.41 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

TATD1_BOVIN (Q148G4), TATD1_ENTBH (B7XJI2), TATD1_HUMAN (Q6P1N9), 
TATD1_MOUSE (Q6P8M1), TATD1_NOSCE (C4VAS3), TATD1_XENLA (Q640V9), 
TATD2_HUMAN (Q93075), TATD_CITK8  (A8ACY8), TATD_CITRI  (D2TUZ4), 
TATD_CROS8  (A7MQN1), TATD_CROTZ  (C9XTA5), TATD_DICD3  (E0SLH6), 
TATD_DICDC  (C6C4V4), TATD_ECOLI  (P27859), TATD_EDWTE  (D0Z9R0), 
TATD_ENT38  (A4WFX9), TATD_ERWAE  (D4ICL5), TATD_ESCF3  (B7LTZ5), 
TATD_KLEP3  (B5XYH5), TATD_PANSA  (E6WHK1), TATD_PANVC  (E1SKR8), 
TATD_PECAS  (Q6DAQ1), TATD_PECCP  (C6DI71), TATD_PECWW  (D0KC77), 
TATD_SALTY  (Q9L6M2), TATD_SERP5  (A8G8C4), TATD_SHIF8  (Q0SZ31), 
TATD_YERPY  (B1JP69), Y009_MYCGE  (P47255), Y009_MYCPN  (P78005), 
Y017_UREPA  (Q9PRC8), Y081_HAEIN  (P44500), Y1582_METJA (Q58977), 
Y1664_HAEIN (P45305), Y1786_SYNY3 (P73335), Y325_BUCBP  (Q89AG7), 
Y343_BUCAP  (Q8K9J1), Y355_BUCAI  (P57436), Y454_HAEIN  (P44718), 
YABD_BACSU  (P37545), YBF5_YEAST  (P34220), YCFH_ECO57  (P0AFQ9), 
YCFH_ECOL6  (P0AFQ8), YCFH_ECOLI  (P0AFQ7), YJJV_ECOLI  (P39408), 
YM8C_YEAST  (P38430)
» More

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

TAT3A_XENLA (Q05AV0), TAT3B_XENLA (Q6GPM3), TATD1_DANRE (Q6GML7), 
TATD1_ENCCU (Q8SW70), TATD3_BOVIN (A1A4M4), TATD3_DANRE (Q503T5), 
TATD3_HUMAN (Q17R31), TATD3_MOUSE (Q3U1C6), TATD_ENTLS  (E3G381), 
TATD_ERWBE  (D8MKW4), TATD_ERWT9  (B2VG45), TATD_PANAM  (D4GGR2), 
TATD_RAHSY  (E8XYF5), Y761_METJA  (Q58171), YNF8_SCHPO  (Q9UUF1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

YMES_GEOSE  (P23918)

		
PDB
[Detailed view]
4 PDB

1XWY; 1YIX; 1ZZM; 2XIO

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