Entry: PS01095

General information about the entry
Entry name CHITINASE_18
Accession number PS01095
Entry type PATTERN
Date NOV-1995 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00839
Associated ProRule PRU10053
Name and characterization of the entry
DescriptionChitinases family 18 active site.
Pattern [LIVMFY]-[DN]-G-[LIVMF]-[DN]-[LIVMF]-[DN]-x-E.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 70 hits in 70 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 59 hits in 59 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 11 hits in 11 different sequences
  • Number of known missed hits: 41
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 6
  • Precision (true hits / (true hits + false positives)): 84.29 %
  • Recall (true hits / (true hits + false negatives)): 59.00 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 9,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CHI1_APHAL  (P32470), CHI1_CANAX  (P46876), CHI1_COCIM  (Q1E3R8), 
CHI1_COCP7  (C5P230), CHI1_COCPS  (P0CB51), CHI1_PINMG  (H2A0L4), 
CHI1_RHINI  (P29025), CHI1_RHIOL  (P29026), CHI2_CANAL  (P40953), 
CHI2_COCIM  (Q1EAR5), CHI2_COCP7  (P54197), CHI2_PINMG  (H2A0L5), 
CHI2_RHIOL  (P29027), CHI2_YEAST  (Q06350), CHI3_CANAL  (P40954), 
CHI4_TRIHA  (P48827), CHIA1_BACCI (P20533), CHIA_ARATH  (P19172), 
CHIA_BOVIN  (Q95M17), CHIA_CICAR  (P36908), CHIA_CUCSA  (P17541), 
CHIA_HUMAN  (Q9BZP6), CHIA_MOUSE  (Q91XA9), CHIA_PHAAN  (P29024), 
CHIA_PSEO7  (P32823), CHIA_RAT    (Q6RY07), CHIA_SERMA  (P07254), 
CHIA_TOBAC  (P29060), CHIB_SERMA  (P11797), CHIB_TOBAC  (P29061), 
CHID_BACCI  (P27050), CHIE_BETVU  (P36910), CHIT1_HUMAN (Q13231), 
CHIT1_MOUSE (Q9D7Q1), CHIT1_TULBA (Q9SLP4), CHIT2_DROME (Q9W092), 
CHIT2_TULBA (Q7M443), CHIT3_DROME (Q9W5U2), CHIT3_VITVI (P51614), 
CHIT_BRUMA  (P29030), CHIT_CAEEL  (Q11174), CHIT_MANSE  (P36362), 
CHIT_NPVAC  (P41684), CHIT_NPVOP  (O10363), CHIT_STRLI  (P36909), 
CHIT_STRPL  (P11220), CHIT_YEAST  (P29029), CHIX_STROI  (Q05638), 
CHI_PINMA   (P86955), CHLY_HEVBR  (P23472), DIAC_BOVIN  (Q01458), 
DIAC_HUMAN  (Q01459), DIAC_MOUSE  (Q8R242), DIAC_RAT    (Q01460), 
EBA2_FLAME  (P36912), EBAG_FLAST  (P80036), EBAG_STRPL  (P04067), 
KTXA_KLULA  (P09805), YKVQ_BACSU  (O31682)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CH3L1_BOVIN (P30922), CH3L1_BUBBU (Q7YS85), CH3L1_CAPHI (Q8SPQ0), 
CH3L1_HUMAN (P36222), CH3L1_MOUSE (Q61362), CH3L1_PIG   (Q29411), 
CH3L1_PONAB (Q5RBP6), CH3L1_RAT   (Q9WTV1), CH3L1_SHEEP (Q6TMG6), 
CH3L2_HUMAN (Q15782), CHIA_ECOLI  (P13656), CHID1_BOVIN (Q5EAB4), 
CHID1_DANRE (Q7SYK0), CHID1_DICDI (Q54G42), CHID1_HUMAN (Q9BWS9), 
CHID1_MOUSE (Q922Q9), CHID1_PONAB (Q5RFF6), CHID1_RAT   (A0JPQ9), 
CHID1_XENLA (Q68EX9), CHID1_XENTR (Q66IL0), CHID_VIBFU  (P96156), 
CHITL_CAEEL (Q18143), CHIT_SACEN  (P14529), CONB_CANEN  (P49347), 
DIAC1_DICDI (Q7KWW8), DIAC2_DICDI (Q8T293), EBA1_FLAME  (P36911), 
EBA3_FLAME  (P36913), OVGP1_BOVIN (Q28042), OVGP1_HUMAN (Q12889), 
OVGP1_MESAU (Q60557), OVGP1_MOUSE (Q62010), OVGP1_PAPAN (P36718), 
OVGP1_PIG   (Q28990), OVGP1_SHEEP (Q28542), XIP1_ORYSJ  (Q7GCM7), 
XIP1_WHEAT  (Q8L5C6), XIP2_ORYSJ  (Q53NL5), YDHD_BACSU  (O05495), 
YKZR_BACSU  (C0H404), YVBX_BACSU  (O32258)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CAI_PHAVU   (P84708), CHI1_STROI  (P29115), CHI2_STROI  (P29116), 
CHIT_STRVL  (P84754), CHLY_PARTH  (P23473), NAHA1_PALCA (P85512)
False positive hits (sequences which do not belong to the set under consideration):
CAPSD_CPVBM (Q6TS43), CAPSD_LDCPR (Q91IE1), CCNL2_XENTR (Q5BKF8), 
HISX_THETN  (Q8R882), NU4C_PROM0  (A3PAL7), NU4C_PROM2  (A8G2F5), 
NU4C_PROM5  (A2BUC6), NU4C_PROM9  (Q31D31), NU4C_PROMP  (Q7V3C8), 
SSUB2_RHIL3 (Q1M7A6), TRPM2_HUMAN (O94759)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1C3F; 1CTN; 1D2K; 1EDT; 1FFQ; 1FFR; 1GOI; 1GUV; 1H0G; 1H0I; 1HKI; 1HKJ; 1HKK; 1HKM; 1HVQ; 1ITX; 1K9T; 1LG1; 1LG2; 1LL4; 1LL6; 1LLO; 1LQ0; 1O6I; 1OGB; 1OGG; 1RD6; 1WAW; 1WB0; 1X6L; 1X6N; 2HVM; 2UY2; 2UY3; 2UY4; 2UY5; 2WK2; 2WLZ; 2WM0; 2YBT; 2YBU; 3FXY; 3FY1; 3RM4; 3RM8; 3RM9; 3RME;

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