Entry: PS01097

General information about the entry

Entry name [info] HUPF_HYPC
Accession [info] PS01097
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1997 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00841

Name and characterization of the entry

Description [info] Hydrogenases expression/synthesis hupF/hypC family signature.
Pattern [info]
<M-C-[LIV]-[GA]-[LIV]-P-x-[QKR]-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 23 in 23 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 1
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.65 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
22 sequences

HOXL_AZOVI  (P40592    ), HOXL_CUPNH  (P31899    ), HUPF_RHILV  (P27651    ), 
HUPF_RHOCA  (Q03005    ), HUPN_AZOCH  (Q43955    ), HYBG_ECO57  (P0AAM9    ), 
HYBG_ECOL6  (P0AAM8    ), HYBG_ECOLI  (P0AAM7    ), HYBG_SHIFL  (P0AAN0    ), 
HYPC_AZOCH  (Q43951    ), HYPC_AZOVI  (P31881    ), HYPC_CUPNH  (P31900    ), 
HYPC_ECO57  (P0AAM5    ), HYPC_ECOL6  (P0AAM4    ), HYPC_ECOLI  (P0AAM3    ), 
HYPC_HELHP  (Q7VJB9    ), HYPC_RHILV  (P28157    ), HYPC_RHOCA  (P40428    ), 
HYPC_SHIFL  (P0AAM6    ), HYPC_SYNY3  (P74095    ), Y200_METJA  (Q57653    ), 
YFRC_PROVU  (P20927    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

HUPF_BRADU  (Q45252    )

		
UniProtKB/Swiss-Prot
'Unknown' sequences
1 sequence

Y1390_HAEIN (P45194    )

		
PDB
[Detailed view]
1 PDB

2OT2

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission