Entry: PS01099

General information about the entry
Entry name COMPLEX1_24K
Accession number PS01099
Entry type PATTERN
Date NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00843
Name and characterization of the entry
DescriptionRespiratory-chain NADH dehydrogenase 24 Kd subunit signature.
Pattern [DKG]-x(2)-[FLV]-[STKD]-x(5)-C-[LMNQ]-[GA]-x-C-x(2)-[GA]-P.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 32 hits in 32 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 32 hits in 32 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 96.97 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 6,iron_sulfur(?)
  • `Interesting' site in the pattern: 10,iron_sulfur(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
NDUV2_ARATH (O22769), NDUV2_BOVIN (P04394), NDUV2_CAEEL (Q20719), 
NDUV2_DICDI (Q54F10), NDUV2_GORGO (Q0MQI8), NDUV2_HUMAN (P19404), 
NDUV2_MOUSE (Q9D6J6), NDUV2_NEUCR (P40915), NDUV2_PANTR (Q0MQI9), 
NDUV2_PONPY (Q0MQI7), NDUV2_RAT   (P19234), NDUV2_SCHPO (O13691), 
NQO2_PARDE  (P29914), NQO2_THET8  (Q56221), NUOE1_RHIME (P56909), 
NUOE2_RHIME (P56910), NUOE_AQUAE  (O66842), NUOE_BUCAI  (P57255), 
NUOE_BUCAP  (Q8K9Y4), NUOE_ECOL6  (P0AFD2), NUOE_ECOLI  (P0AFD1), 
NUOE_MYCBO  (P65574), NUOE_MYCTU  (P65573), NUOE_PSEAE  (Q9I0J8), 
NUOE_RICBR  (Q1RJJ1), NUOE_RICCN  (Q92ID9), NUOE_RICFE  (Q4UM09), 
NUOE_RICPR  (Q9ZDH5), NUOE_RICTY  (Q68X20), NUOE_SALTI  (P0A1Y9), 
NUOE_SALTY  (P0A1Y8), NUOE_SHIFL  (P0AFD3)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
HNDA_DESFR  (Q46505)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
NDUV2_CANFA (P49820)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 2FUG; 2YBB; 3I9V; 3IAM; 3IAS; 3M9S; 4HEA;

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