Entry: PS01119

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General information about the entry

Entry name [info] COPPER_FIST_1
Accession [info] PS01119
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00863

Name and characterization of the entry

Description [info] Copper-fist DNA-binding domain signature.
Pattern [info]
M-[LIVMFP]-[LIVMF](2)-x(3)-[KN]-[MY]-A-C-x(2)-C-[IL]-[KR]-x-H-[KR]-x(3)-
C-x-H-x(8,9)-[KR]-x-[KRP]-G-R-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 8 in 8 different sequences
Number of true positive hits 8 in 8 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
8 sequences

AMT1_CANGA  (P41772), CRF1_YARLI  (P45815), CUF1_SCHPO  (Q09728), 
CUF2_SCHPO  (O94588), CUP2_YEAST  (P15315), GRISA_PODAS (Q92258), 
HAA1_YEAST  (Q12753), MAC1_YEAST  (P35192)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MAC1_CANAL  (Q5AFK0)

		
PDB
[Detailed view]
1 PDB

1CO4

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