Entry: PS01141

General information about the entry
Entry name T2SP_C
Accession number PS01141
Entry type PATTERN
Date NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00878
Name and characterization of the entry
DescriptionBacterial type II secretion system protein C signature.
Pattern P-x(6)-F-x(4)-[LF]-x(3)-D-[LIVM]-A-[LIVM]-x-[LIVM]-N-x-[LIVMQ]-x-[LF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 9 hits in 9 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 9 hits in 9 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
GSPC1_ERWCH (P31698), GSPC2_DICD3 (Q01564), GSPC_AERHY  (P45790), 
GSPC_AERSA  (P45772), GSPC_ECOLI  (P45757), GSPC_KLEPN  (P15643), 
GSPC_PECCC  (P31699), GSPC_VIBCH  (P45777), YGHF_ECOLI  (Q46834)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 2I6V;

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