Entry: PS01145

General information about the entry

Entry name [info] RIBOSOMAL_L34E
Accession [info] PS01145
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2001 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00882

Name and characterization of the entry

Description [info] Ribosomal protein L34e signature.
Pattern [info]
[ST]-x-S-x-[KRQ]-x(4)-[KR]-[TL]-P-[GS]-[GN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.87 %
Recall (true positives / (true positives + false negatives)) 83.64 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

RL341_ARATH (Q42351    ), RL342_ARATH (Q9FE65    ), RL343_ARATH (Q9LJW6    ), 
RL34A_SCHPO (O42846    ), RL34A_YEAST (P87262    ), RL34B_SCHPO (Q9URT8    ), 
RL34B_YEAST (P40525    ), RL34_AEDAL  (P45842    ), RL34_AERPE  (P58026    ), 
RL34_DANRE  (Q7ZWJ7    ), RL34_ENCCU  (Q8SSA2    ), RL34_HUMAN  (P49207    ), 
RL34_HYPBU  (A2BME5    ), RL34_ICTPU  (Q90YT5    ), RL34_METJA  (P54053    ), 
RL34_METKA  (Q8TZB2    ), RL34_METTH  (O26137    ), RL34_MOUSE  (Q9D1R9    ), 
RL34_OCHTR  (Q9NB34    ), RL34_PEA    (P40590    ), RL34_PIG    (Q29223    ), 
RL34_PYRAB  (Q9UZJ7    ), RL34_PYRAE  (Q8ZTJ2    ), RL34_PYRCJ  (A3MV68    ), 
RL34_PYRFU  (Q8U2L3    ), RL34_PYRHO  (O74006    ), RL34_PYRIL  (A1RRJ4    ), 
RL34_PYRNV  (B1YAJ9    ), RL34_RAT    (P11250    ), RL34_STAMF  (A3DND2    ), 
RL34_SULAC  (O05981    ), RL34_SULIA  (C3N5V3    ), RL34_SULIK  (C4KHI2    ), 
RL34_SULIL  (C3MQ85    ), RL34_SULIM  (C3MVX7    ), RL34_SULIN  (C3NH83    ), 
RL34_SULIY  (C3NEG9    ), RL34_SULSO  (Q97ZQ6    ), RL34_SULTO  (Q975K6    ), 
RL34_TETTS  (P0DJ23    ), RL34_THEGJ  (C5A259    ), RL34_THEKO  (Q5JJF7    ), 
RL34_THEON  (B6YSP0    ), RL34_THEPD  (A1RXV1    ), RL34_THESM  (C6A186    ), 
RL34_TOBAC  (P41098    )
» more

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

RL34_DICDI  (Q54LV8    ), RL34_META3  (A6UW33    ), RL34_METM5  (A4FYK0    ), 
RL34_METM6  (A9A697    ), RL34_METM7  (A6VJT2    ), RL34_METMP  (Q6LZK0    ), 
RL34_METS3  (A5UL62    ), RL34_METST  (Q2NFY3    ), RL34_METVS  (A6USC2    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CHO2_PARBA  (C1GZK1    )

		
PDB
[Detailed view]
1 PDB

4ADX

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission