Entry: PS01149

General information about the entry
Entry name PSI_RSU
Accession number PS01149
Entry type PATTERN
Date NOV-1995 (CREATED); JUL-1999 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00885
Name and characterization of the entry
DescriptionRsu family of pseudouridine synthase signature.
Pattern G-R-L-D-x(2)-[STA]-x-G-[LIVFA]-[LIVMF](3)-[ST]-[DNST].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 71 hits in 71 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 71 hits in 71 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RLUB_BACSU  (P35159), RLUB_BUCAI  (P57369), RLUB_BUCAP  (P42395), 
RLUB_BUCBP  (Q89AL1), RLUB_ECO57  (Q8X4Q8), RLUB_ECOL6  (Q8FHV4), 
RLUB_ECOLI  (P37765), RLUB_HAEIN  (P45104), RLUB_PASMU  (Q9CMY9), 
RLUB_PSEAE  (Q9HZ55), RLUB_SALTI  (Q8Z7D5), RLUB_SALTY  (Q8ZP51), 
RLUB_SHIFL  (P59815), RLUB_VIBCH  (Q9KSS7), RLUB_VIBPA  (Q87NB7), 
RLUB_VIBVU  (Q8D8C0), RLUB_XANAC  (Q8PK58), RLUB_XANCP  (Q8P8M6), 
RLUB_XYLFA  (Q9PAP2), RLUB_XYLFT  (Q87BI2), RLUB_YERPE  (Q8ZEG0), 
RLUE_ECO57  (Q8X724), RLUE_ECOL6  (Q8FIB6), RLUE_ECOLI  (P75966), 
RLUE_HAEIN  (P44827), RLUE_PASMU  (Q9CKK7), RLUE_PSEAE  (Q9HX48), 
RLUE_SALTI  (Q8Z7G6), RLUE_SALTY  (Q8ZPZ1), RLUE_SHIFL  (Q83LF6), 
RLUE_VIBCH  (Q9F855), RLUE_VIBPA  (Q87QY8), RLUE_VIBVU  (Q8DAS3), 
RLUE_XANAC  (Q8PQN3), RLUE_XANCP  (Q8PDR2), RLUE_YERPE  (Q8ZFQ3), 
RLUF_ECO57  (Q8X4L9), RLUF_ECOL6  (Q8FB47), RLUF_ECOLI  (P32684), 
RLUF_SALTI  (Q8Z1V3), RLUF_SALTY  (Q8ZKL1), RLUF_SHIFL  (Q83IR6), 
RSUA_ECO57  (P0AA45), RSUA_ECOL6  (P0AA44), RSUA_ECOLI  (P0AA43), 
RSUA_HAEIN  (P45124), RSUA_PASMU  (Q9CPN4), RSUA_PSEAE  (Q9I5J6), 
RSUA_SALTI  (P65841), RSUA_SALTY  (P65840), RSUA_SHIFL  (P0AA46), 
RSUA_VIBCH  (Q9KRK5), RSUA_VIBPA  (Q87QD4), RSUA_VIBVU  (Q8D8X2), 
RSUA_YERPE  (Q8ZGM2), Y129_BORBU  (O51155), Y1370_MYCLE (O05668), 
Y1459_HELPY (P55986), Y1464_AQUAE (O67444), Y1711_MYCTU (P65842), 
Y1738_MYCBO (P65843), Y321_RICBR  (Q1RJR2), Y361_SYNY3  (Q55578), 
Y532_RICTY  (Q68WJ1), Y544_RICFE  (Q4UL59), Y544_RICPR  (Q9ZD06), 
Y554_AQUAE  (O66829), Y612_SYNY3  (P72581), Y807_RICCN  (Q92HG4), 
YE59_HELPJ  (Q9ZJG0), YTZG_BACSU  (O32068)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1VIO; 2GML; 2OLW; 2OML; 3DH3;

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