PROSITE entry PS01149

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General information about the entry

Entry name [info]	PSI_RSU
Accession [info]	PS01149
Entry type [info]	PATTERN
Date [info]	01-NOV-1995 CREATED; 01-JUL-1999 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00885

Name and characterization of the entry

Description [info]	Rsu family of pseudouridine synthase signature.
Pattern [info]	G-R-L-D-x(2)-[STA]-x-G-[LIVFA]-[LIVMF](3)-[ST]-[DNST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	73 in 73 different sequences
Number of true positive hits	73 in 73 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

73 sequences

RLUB_BACSU  (P35159), RLUB_BUCAI  (P57369), RLUB_BUCAP  (P42395),

RLUB_BUCBP  (Q89AL1), RLUB_ECO57  (Q8X4Q8), RLUB_ECOL6  (Q8FHV4), 
RLUB_ECOLI  (P37765), RLUB_HAEIN  (P45104), RLUB_PASMU  (Q9CMY9), 
RLUB_PSEAE  (Q9HZ55), RLUB_SALTI  (Q8Z7D5), RLUB_SALTY  (Q8ZP51), 
RLUB_SHIFL  (P59815), RLUB_VIBCH  (Q9KSS7), RLUB_VIBPA  (Q87NB7), 
RLUB_VIBVU  (Q8D8C0), RLUB_XANAC  (Q8PK58), RLUB_XANCP  (Q8P8M6), 
RLUB_XYLFA  (Q9PAP2), RLUB_XYLFT  (Q87BI2), RLUB_YERPE  (Q8ZEG0), 
RLUE_ECO57  (Q8X724), RLUE_ECOL6  (Q8FIB6), RLUE_ECOLI  (P75966), 
RLUE_HAEIN  (P44827), RLUE_PASMU  (Q9CKK7), RLUE_PSEAE  (Q9HX48), 
RLUE_SALTI  (Q8Z7G6), RLUE_SALTY  (Q8ZPZ1), RLUE_SHIFL  (Q83LF6), 
RLUE_VIBCH  (Q9F855), RLUE_VIBPA  (Q87QY8), RLUE_VIBVU  (Q8DAS3), 
RLUE_XANAC  (Q8PQN3), RLUE_XANCP  (Q8PDR2), RLUE_YERPE  (Q8ZFQ3), 
RLUF_ECO57  (Q8X4L9), RLUF_ECOL6  (Q8FB47), RLUF_ECOLI  (P32684), 
RLUF_SALTI  (Q8Z1V3), RLUF_SALTY  (Q8ZKL1), RLUF_SHIFL  (Q83IR6), 
RSUA_ECO57  (P0AA45), RSUA_ECOL6  (P0AA44), RSUA_ECOLI  (P0AA43), 
RSUA_HAEIN  (P45124), RSUA_PASMU  (Q9CPN4), RSUA_PSEAE  (Q9I5J6), 
RSUA_SALTI  (P65841), RSUA_SALTY  (P65840), RSUA_SHIFL  (P0AA46), 
RSUA_VIBCH  (Q9KRK5), RSUA_VIBPA  (Q87QD4), RSUA_VIBVU  (Q8D8X2), 
RSUA_YERPE  (Q8ZGM2), SVR1_ARATH  (Q8L960), Y129_BORBU  (O51155), 
Y1370_MYCLE (O05668), Y1459_HELPY (P55986), Y1464_AQUAE (O67444), 
Y1711_MYCTO (P9WHQ0), Y1711_MYCTU (P9WHQ1), Y1738_MYCBO (P65843), 
Y321_RICBR  (Q1RJR2), Y361_SYNY3  (Q55578), Y532_RICTY  (Q68WJ1), 
Y544_RICFE  (Q4UL59), Y544_RICPR  (Q9ZD06), Y554_AQUAE  (O66829), 
Y612_SYNY3  (P72581), Y807_RICCN  (Q92HG4), YE59_HELPJ  (Q9ZJG0), 
YTZG_BACSU  (O32068)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
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[Clustal format, plain text] [Fasta format]
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PDB
[Detailed view]

10 PDB

1KSK; 1KSL; 1KSV; 1VIO; 2GML; 2OLW; 2OML; 3DH3; 4LAB; 4LGT