Entry: PS01155

General information about the entry

Entry name [info] ENDONUCLEASE_III_2
Accession [info] PS01155
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00615

Name and characterization of the entry

Description [info] Endonuclease III family signature.
Pattern [info]
[GSTENA]-x-[LIVMF]-P-x(5)-[LIVMW]-x(2,3)-[LI]-[PAS]-G-[IV]-[GA]-x(3)-
[GAC]-x(2,3)-[LIVMA]-x(1,2)-[GSALVI]-[LIVMFYW]-[GANKD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 42 in 42 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 5
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 97.67 %
Recall (true positives / (true positives + false negatives)) 89.36 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
42 sequences

END3_BACSU  (P39788    ), END3_BUCAI  (P57219    ), END3_BUCAP  (Q8KA16    ), 
END3_BUCBP  (Q89AW4    ), END3_ECOL6  (P0AB84    ), END3_ECOLI  (P0AB83    ), 
END3_HAEIN  (P44319    ), END3_METJA  (Q58030    ), END3_MYCBO  (P63541    ), 
END3_MYCLE  (Q9CB92    ), END3_MYCTO  (P9WQ10    ), END3_MYCTU  (P9WQ11    ), 
END3_RICCN  (Q92GH4    ), END3_RICFE  (Q4UK93    ), END3_RICPR  (O05956    ), 
END3_RICTY  (Q68W04    ), END3_SYNY3  (P73715    ), END3_THEMA  (Q9WYK0    ), 
END3_TREPA  (O83754    ), GTMR_METTF  (P29588    ), MUTYH_HUMAN (Q9UIF7    ), 
MUTYH_MOUSE (Q99P21    ), MUTYH_RAT   (Q8R5G2    ), MUTY_BUCAI  (P57617    ), 
MUTY_BUCAP  (Q8K926    ), MUTY_BUCBP  (Q89A45    ), MUTY_ECOLI  (P17802    ), 
MUTY_HAEIN  (P44320    ), MUTY_SALTY  (Q05869    ), MYH1_SCHPO  (Q10159    ), 
NTH1_ARATH  (Q9SIC4    ), NTH1_YEAST  (P31378    ), NTH2_ARATH  (B9DFZ0    ), 
NTH2_YEAST  (Q08214    ), NTH_BOVIN   (Q2KID2    ), NTH_CAEEL   (P54137    ), 
NTH_CHICK   (A7M7B9    ), NTH_EMENI   (C8VC05    ), NTH_HUMAN   (P78549    ), 
NTH_MOUSE   (O35980    ), NTH_SCHPO   (Q09907    ), UVEN_MICLC  (P46303    )
» more

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

MUTYH_ARATH (F4JRF4    ), MUTY_BACSU  (O31584    ), MUTY_GEOSE  (P83847    ), 
NTH_ENCCU   (Q8SRB8    ), Y1434_METJA (Q58829    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

MUTY_AERHY  (P46230    )

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ELN_HUMAN   (P15502    )

		
PDB
[Detailed view]
16 PDB

1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1KQJ; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 1WEI; 2ABK; 3N5N
» more

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