Entry: PS01155

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General information about the entry

Entry name [info] ENDONUCLEASE_III_2
Accession [info] PS01155
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00615

Name and characterization of the entry

Description [info] Endonuclease III family signature.
Pattern [info]
[GSTENA]-x-[LIVMF]-P-x(5)-[LIVMW]-x(2,3)-[LI]-[PAS]-G-[IV]-[GA]-x(3)-
[GAC]-x(2,3)-[LIVMA]-x(1,2)-[GSALVI]-[LIVMFYW]-[GANKD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 43 in 43 different sequences
Number of true positive hits 42 in 42 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 97.67 %
Recall (true positives / (true positives + false negatives)) 91.30 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
42 sequences

END3_BACSU  (P39788), END3_BUCAI  (P57219), END3_BUCAP  (Q8KA16), 
END3_BUCBP  (Q89AW4), END3_ECOL6  (P0AB84), END3_ECOLI  (P0AB83), 
END3_HAEIN  (P44319), END3_METJA  (Q58030), END3_MYCBO  (P63541), 
END3_MYCLE  (Q9CB92), END3_MYCTO  (P9WQ10), END3_MYCTU  (P9WQ11), 
END3_RICCN  (Q92GH4), END3_RICFE  (Q4UK93), END3_RICPR  (O05956), 
END3_RICTY  (Q68W04), END3_SYNY3  (P73715), END3_THEMA  (Q9WYK0), 
END3_TREPA  (O83754), GTMR_METTF  (P29588), MUTYH_HUMAN (Q9UIF7), 
MUTYH_MOUSE (Q99P21), MUTYH_RAT   (Q8R5G2), MUTY_BUCAI  (P57617), 
MUTY_BUCAP  (Q8K926), MUTY_BUCBP  (Q89A45), MUTY_ECOLI  (P17802), 
MUTY_HAEIN  (P44320), MUTY_SALTY  (Q05869), MYH1_SCHPO  (Q10159), 
NTH1_ARATH  (Q9SIC4), NTH1_YEAST  (P31378), NTH2_ARATH  (B9DFZ0), 
NTH2_YEAST  (Q08214), NTH_BOVIN   (Q2KID2), NTH_CAEEL   (P54137), 
NTH_CHICK   (A7M7B9), NTH_EMENI   (C8VC05), NTH_HUMAN   (P78549), 
NTH_MOUSE   (O35980), NTH_SCHPO   (Q09907), UVEN_MICLC  (P46303)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

MUTYH_ARATH (F4JRF4), NTH_ENCCU   (Q8SRB8), Y1434_METJA (Q58829), 
YFHQ_BACSU  (O31584)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

MUTY_AERHY  (P46230)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ELN_HUMAN   (P15502)

		
PDB
[Detailed view]
16 PDB

1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1KQJ; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 1WEI; 2ABK; 3N5N
» More

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