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| Entry: PS01161 |
General information about the entry
| Entry name [info] | GLC_GALNAC_ISOMERASE |
| Accession [info] | PS01161 |
| Entry type [info] | PATTERN |
| Date [info] | 01-NOV-1995 CREATED; 01-DEC-2004 DATA UPDATE; 05-JUL-2017 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00894 |
Name and characterization of the entry
| Description [info] | Glucosamine/galactosamine-6-phosphate isomerases signature. |
| Pattern [info] |
[LIVM]-x(3)-[GNH]-x(0,1)-[LITCRV]-x-[LIVWF]-x-[LIVMF]-x-[GS]-[LIVM]-G-x- [DENV]-G-[HN]. |
Numerical results [info]
| Total number of hits | 276 in 276 different sequences |
| Number of true positive hits | 276 in 276 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 12 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 95.83 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
276 sequences
AGAI_ECOLI (P42912 ), GAMA_BACSU (O31458 ), GNPI1_BOVIN (A4FV08 ), GNPI1_GIAIN (O97439 ), GNPI1_HUMAN (P46926 ), GNPI1_MESAU (Q64422 ), GNPI1_MOUSE (O88958 ), GNPI1_PONAB (Q5R8T8 ), GNPI2_BOVIN (Q17QL1 ), GNPI2_GIAIN (O97440 ), GNPI2_HUMAN (Q8TDQ7 ), GNPI2_MOUSE (Q9CRC9 ), GNPI2_XENLA (Q6PA43 ), GNPI2_XENTR (A4IHW6 ), GNPI_AEDAE (Q16HW7 ), GNPI_ANOGA (Q5TNH5 ), GNPI_CAEEL (Q9XVJ2 ), GNPI_DICDI (Q54XK9 ), GNPI_DROME (Q9VMP9 ), GNPI_DROPS (Q29NT9 ), NAG1_CANAL (Q04802 ), NAGB_ACTP2 (A3N353 ), NAGB_ACTP7 (B3GZ06 ), NAGB_ACTPJ (B0BSS6 ), NAGB_AERHH (A0KIG3 ), NAGB_AERS4 (A4SPM2 ), NAGB_ALISL (B6EN78 ), NAGB_ALKMQ (A6TVP5 ), NAGB_ALKOO (A8MIX7 ), NAGB_ARTS2 (A0JY49 ), NAGB_BACAA (C3P761 ), NAGB_BACAC (C3LIR9 ), NAGB_BACAH (A0RI59 ), NAGB_BACAN (Q81MH5 ), NAGB_BACC0 (B7JL33 ), NAGB_BACC1 (Q731P4 ), NAGB_BACC2 (B7IWG6 ), NAGB_BACC3 (C1EQS8 ), NAGB_BACC4 (B7H945 ), NAGB_BACC7 (B7HN32 ), NAGB_BACCN (A7GS78 ), NAGB_BACCQ (B9IWR7 ), NAGB_BACCR (Q819D1 ), NAGB_BACCZ (Q635M6 ), NAGB_BACFN (Q5LGU0 ), NAGB_BACFR (Q64XP2 ), NAGB_BACHD (Q9KFQ8 ), NAGB_BACHK (Q6HEB2 ), NAGB_BACP2 (A8FHS6 ), NAGB_BACSK (Q5WHY0 ), NAGB_BACSU (O35000 ), NAGB_BACTN (Q8A094 ), NAGB_BACV8 (A6L7Q8 ), NAGB_BACWK (A9VFF7 ), NAGB_BEUC1 (C5BY94 ), NAGB_BIFLD (B3DQQ9 ), NAGB_BIFLO (Q8G4N5 ), NAGB_BIFLS (B7GQA1 ), NAGB_BLOFL (Q7VR99 ), NAGB_BORAP (Q0SP13 ), NAGB_BORBP (Q662L3 ), NAGB_BORBU (O30564 ), NAGB_BORBZ (B7J183 ), NAGB_BORHD (B2RZL5 ), NAGB_BREBN (C0ZJF8 ), NAGB_CALS4 (Q8R5T0 ), NAGB_CELJU (B3PBV0 ), NAGB_CITK8 (A8AJE0 ), NAGB_CLOAB (Q97MK9 ), NAGB_CLOB1 (A7FX73 ), NAGB_CLOB6 (C3L2N7 ), NAGB_CLOB8 (A6M241 ), NAGB_CLOBH (A5I5R9 ), NAGB_CLOBJ (C1FV12 ), NAGB_CLOBK (B1IKY4 ), NAGB_CLOBL (A7GH51 ), NAGB_CLOBM (B1KZ07 ), NAGB_CLONN (A0PYW1 ), NAGB_CLOP1 (Q0TML8 ), NAGB_CLOPE (Q8XHP8 ), NAGB_CLOPS (Q0SQB4 ), NAGB_CLOTE (Q890L6 ), NAGB_COLP3 (Q487K8 ), NAGB_CORA7 (C3PJW6 ), NAGB_CORDI (Q6NJ91 ), NAGB_COREF (Q8FMI6 ), NAGB_CORK4 (C4LL80 ), NAGB_CORU7 (B1VI88 ), NAGB_CROS8 (A7MQT6 ), NAGB_DESAD (C6C0A2 ), NAGB_ECO24 (A7ZJ60 ), NAGB_ECO27 (B7UKV0 ), NAGB_ECO45 (B7MFT4 ), NAGB_ECO55 (B7L9L4 ), NAGB_ECO57 (P0A760 ), NAGB_ECO5E (B5YQM0 ), NAGB_ECO7I (B7NMM9 ), NAGB_ECO81 (B7MPI3 ), NAGB_ECO8A (B7M5J6 ), NAGB_ECOBW (C4ZWF4 ), NAGB_ECODH (B1X6L1 ), NAGB_ECOHS (A7ZXT7 ), NAGB_ECOK1 (A1A8T7 ), NAGB_ECOL5 (Q0TK13 ), NAGB_ECOL6 (Q8FJX7 ), NAGB_ECOLC (B1IY50 ), NAGB_ECOLI (P0A759 ), NAGB_ECOLU (B7N9S4 ), NAGB_ECOSE (B6HYN6 ), NAGB_ECOSM (B1LLC0 ), NAGB_ECOUT (Q1REP9 ), NAGB_EDWI9 (C5BGA6 ), NAGB_ENT38 (A4W844 ), NAGB_ENTFA (P59687 ), NAGB_ERWT9 (B2VBN5 ), NAGB_ESCF3 (B7LKT5 ), NAGB_EXIS2 (B1YJ30 ), NAGB_EXISA (C4L2C5 ), NAGB_FUSNN (Q8REG1 ), NAGB_GEOSW (C5D3L0 ), NAGB_HAEDU (Q7VKN1 ), NAGB_HAEI8 (Q4QP46 ), NAGB_HAEIE (A5UB10 ), NAGB_HAEIN (P44538 ), NAGB_HAEPS (B8F877 ), NAGB_HAES1 (Q0I4B9 ), NAGB_HAHCH (Q2S6X5 ), NAGB_HALOH (B8D185 ), NAGB_HISS2 (B0UUN2 ), NAGB_KLEP3 (B5XZG9 ), NAGB_KLEP7 (A6T6C1 ), NAGB_LACAC (Q5FHT1 ), NAGB_LACDA (Q1G817 ), NAGB_LACDB (Q047I3 ), NAGB_LACH4 (A8YTN8 ), NAGB_LACJO (Q74HC4 ), NAGB_LACLA (Q9CFA8 ), NAGB_LACLM (A2RJR7 ), NAGB_LACLS (Q02Y08 ), NAGB_LACP3 (Q033M5 ), NAGB_LACP7 (A9KIR8 ), NAGB_LACPL (Q88ZS6 ), NAGB_LACS1 (Q1WS60 ), NAGB_LACSS (Q38YK9 ), NAGB_LEUCK (B1MX39 ), NAGB_LEUMM (Q03Z95 ), NAGB_LISIN (Q92D64 ), NAGB_LISMC (C1L1M8 ), NAGB_LISMF (Q721K9 ), NAGB_LISMH (B8DEH8 ), NAGB_LISMO (Q8Y8E7 ), NAGB_LISW6 (A0AH75 ), NAGB_LYSSC (B1HUU8 ), NAGB_LYSSH (P59686 ), NAGB_MANSM (Q65QE8 ), NAGB_MARMS (A6VVU9 ), NAGB_MYCMS (Q6MSF4 ), NAGB_MYCPE (Q8EWM7 ), NAGB_MYCPU (Q98QJ9 ), NAGB_MYCS2 (A0QU88 ), NAGB_OCEIH (Q8ESL6 ), NAGB_OENOB (Q04G36 ), NAGB_PARD8 (A6LHV2 ), NAGB_PASMU (Q9CMF4 ), NAGB_PECAS (Q6D7J9 ), NAGB_PECCP (C6DBY4 ), NAGB_PEDPA (Q03H91 ), NAGB_PHOLL (Q7MB61 ), NAGB_PORG3 (B2RJ01 ), NAGB_PORGI (Q7MW43 ), NAGB_PROMH (B4ESJ0 ), NAGB_PSECP (B8HAX3 ), NAGB_PSEHT (Q3ID09 ), NAGB_PSYIN (A1SS81 ), NAGB_RHOBA (Q7UVM5 ), NAGB_RHOJR (Q0SGH6 ), NAGB_RHOOB (C1AW66 ), NAGB_SALA4 (B5EZC1 ), NAGB_SALAR (A9MKA9 ), NAGB_SALCH (Q57RQ0 ), NAGB_SALDC (B5FNB9 ), NAGB_SALEP (B5QWC8 ), NAGB_SALG2 (B5R824 ), NAGB_SALHS (B4TB82 ), NAGB_SALNS (B4SYN7 ), NAGB_SALPA (Q5PCH6 ), NAGB_SALPB (A9MUG8 ), NAGB_SALPC (C0PWA5 ), NAGB_SALPK (B5BCC5 ), NAGB_SALSV (B4TPZ8 ), NAGB_SALTI (Q8Z8G0 ), NAGB_SALTY (Q8ZQX7 ), NAGB_SERP5 (A8GB41 ), NAGB_SHEHH (B0TTP5 ), NAGB_SHELP (A3QB39 ), NAGB_SHESH (A8FRI2 ), NAGB_SHEWM (B1KFS0 ), NAGB_SHIB3 (B2TU53 ), NAGB_SHIBS (Q324M6 ), NAGB_SHIDS (Q32IQ2 ), NAGB_SHIF8 (Q0T6S6 ), NAGB_SHIFL (P59688 ), NAGB_SHISS (Q3Z4C2 ), NAGB_STAA1 (A7WZ06 ), NAGB_STAA2 (A6TZ46 ), NAGB_STAA3 (Q2FJ71 ), NAGB_STAA8 (Q2G0K8 ), NAGB_STAA9 (A5IQC3 ), NAGB_STAAB (Q2YS95 ), NAGB_STAAC (Q5HIA6 ), NAGB_STAAE (A6QEM2 ), NAGB_STAAM (P65512 ), NAGB_STAAN (P99125 ), NAGB_STAAR (Q6GJA0 ), NAGB_STAAS (Q6GBR8 ), NAGB_STAAT (A8YZR7 ), NAGB_STAAW (P65513 ), NAGB_STAEQ (Q5HRH8 ), NAGB_STAES (Q8CTR3 ), NAGB_STAS1 (Q49VB6 ), NAGB_STRA1 (Q3K1Q7 ), NAGB_STRA3 (P65514 ), NAGB_STRA5 (P65515 ), NAGB_STRAW (P59689 ), NAGB_STRCO (Q9K487 ), NAGB_STRE4 (C0M970 ), NAGB_STREM (B4U206 ), NAGB_STRGC (A8AYK4 ), NAGB_STRP1 (Q99Z50 ), NAGB_STRP2 (Q04JT5 ), NAGB_STRP3 (P0DC66 ), NAGB_STRP4 (B5E5S3 ), NAGB_STRP6 (Q5XBG4 ), NAGB_STRP7 (C1C814 ), NAGB_STRP8 (Q8P0E0 ), NAGB_STRPG (A2RDX6 ), NAGB_STRPI (B1ICL5 ), NAGB_STRPJ (B8ZKX4 ), NAGB_STRPN (Q97Q16 ), NAGB_STRPQ (P0DC67 ), NAGB_STRPZ (B5XM45 ), NAGB_STRR6 (Q8DPA1 ), NAGB_STRS2 (A4W0A3 ), NAGB_STRS7 (C0MCU1 ), NAGB_STRSY (A4VU11 ), NAGB_STRTD (Q03LS1 ), NAGB_STRU0 (B9DWG4 ), NAGB_STRZJ (C1CF03 ), NAGB_STRZP (C1CLC3 ), NAGB_STRZT (C1CQU2 ), NAGB_THEP3 (B0K934 ), NAGB_THEPX (B0K0J7 ), NAGB_TOLAT (C4L889 ), NAGB_TREDE (Q73QV6 ), NAGB_VIBC3 (A5F125 ), NAGB_VIBCB (A7N5W3 ), NAGB_VIBCH (Q9KKS5 ), NAGB_VIBCM (C3LWT7 ), NAGB_VIBF1 (Q5E294 ), NAGB_VIBFM (B5FBU7 ), NAGB_VIBPA (Q87K60 ), NAGB_VIBTL (B7VTI0 ), NAGB_VIBVU (Q8D4T9 ), NAGB_VIBVY (Q7MGE1 ), NAGB_YERE8 (A1JQE8 ), NAGB_YERP3 (A7FKU3 ), NAGB_YERPA (Q1C537 ), NAGB_YERPB (B2K8A2 ), NAGB_YERPE (Q8ZDE1 ), NAGB_YERPG (A9R7S4 ), NAGB_YERPN (Q1CKN7 ), NAGB_YERPP (A4TNY0 ), NAGB_YERPS (Q66DC7 ), NAGB_YERPY (B1JG88 ), Y258_BACTN (Q8AB53 ), YIEK_ECOLI (P31470 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
12 sequences
NAGB_ACHLI (A9NEX8 ), NAGB_BACVZ (A7Z975 ), NAGB_CLOBA (B2V163 ), NAGB_CLOBB (B2TL69 ), NAGB_CORGB (A4QH44 ), NAGB_CORGL (Q8NMD4 ), NAGB_LACRD (A5VKB2 ), NAGB_PEPD6 (Q18AL0 ), NAGB_PROAC (Q6AAI8 ), NAGB_STAHJ (Q4L9T8 ), NAGB_STRMU (Q8DV70 ), NAGB_STRSV (A3CLX4 )» more |
| PDB [Detailed view] |
17 PDB
1CD5; 1DEA; 1FQO; 1FRZ; 1FS5; 1FS6; 1FSF; 1HOR; 1HOT; 1JT9; 1NE7; 2BKV; 2BKX; 2WU1; 3HN6; 4R7T; 5HJ5 » more |
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