 |
|
| Entry: PS01209 |
| General information about the entry | |
|---|---|
| Entry name | LDLRA_1 |
| Accession number | PS01209 |
| Entry type | PATTERN |
| Date | NOV-1997 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00929 |
| Name and characterization of the entry | |
| Description | LDL-receptor class A (LDLRA) domain signature. |
| Pattern | C-[VILMA]-x(5,6)-C-[DNH]-x(3)-[DENQHT]-C-x(3,4)-[STADEW]-[DEH]-[DE]- x(1,5)-C. |
| Numerical results | |
|
|
| Comments | |
|
|
| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:AEGP_HUMAN (Q6UXC1), AEGP_MOUSE (A2AJA7), AEGP_RAT (Q63191), CD320_BOVIN (A6QNY1), CD320_HUMAN (Q9NPF0), CD320_MOUSE (Q9Z1P5), CD320_RAT (Q5HZW5), CFAI_HUMAN (P05156), CFAI_MOUSE (Q61129), CFAI_PONAB (Q5R5A4), CFAI_RAT (Q9WUW3), CJ112_HUMAN (Q5VYJ5), CO6_BOVIN (Q29RU4), CO6_HUMAN (P13671), CO6_PANTR (P61134), CO6_PONPY (P61135), CO6_RAT (Q811M5), CO7_BOVIN (Q29RQ1), CO7_HUMAN (P10643), CO7_PIG (Q9TUQ3), CO7_PONAB (Q5RAD0), CO8A_HUMAN (P07357), CO8A_MOUSE (Q8K182), CO8A_RABIT (P98136), CO8B_HUMAN (P07358), CO8B_MOUSE (Q8BH35), CO8B_PAROL (Q9PVW7), CO8B_RABIT (P98137), CO8B_RAT (P55314), CO9_BOVIN (Q3MHN2), CO9_HORSE (P48770), CO9_HUMAN (P02748), CO9_MOUSE (P06683), CO9_ONCMY (P06682), CO9_RABIT (P48747), CO9_RAT (Q62930), CO9_TAKRU (P79755), CORIN_HUMAN (Q9Y5Q5), CORIN_MOUSE (Q9Z319), CORIN_RAT (Q80YN4), CTX_SEPES (B2DCR8), ENTK_BOVIN (P98072), ENTK_HUMAN (P98073), ENTK_MOUSE (P97435), ENTK_PIG (P98074), GLBL_LAMSP (P16222), GLBL_TYLHE (P18207), GLBM_TYLHE (P18208), GR101_LYMST (P46023), IDD_HUMAN (P98153), IDD_MOUSE (P98154), LDLR1_XENLA (Q99087), LDLR2_XENLA (Q99088), LDLR_CRIGR (P35950), LDLR_HUMAN (P01130), LDLR_MOUSE (P35951), LDLR_PIG (Q28832), LDLR_RABIT (P20063), LDLR_RAT (P35952), LRAD1_HUMAN (Q5T700), LRAD3_HUMAN (Q86YD5), LRAD3_MOUSE (A2AR95), LRAD3_XENTR (A4IHY6), LRAD4_HUMAN (O15165), LRAD4_MOUSE (Q8BWJ4), LRP10_HUMAN (Q7Z4F1), LRP10_MOUSE (Q7TQH7), LRP11_HUMAN (Q86VZ4), LRP11_MOUSE (Q8CB67), LRP12_HUMAN (Q9Y561), LRP12_MACFA (Q9BE74), LRP12_MOUSE (Q8BUJ9), LRP12_PONAB (Q5R662), LRP1B_HUMAN (Q9NZR2), LRP1B_MOUSE (Q9JI18), LRP1_CHICK (P98157), LRP1_HUMAN (Q07954), LRP1_MOUSE (Q91ZX7), LRP2_HUMAN (P98164), LRP2_MOUSE (A2ARV4), LRP2_RAT (P98158), LRP3_HUMAN (O75074), LRP3_RAT (O88204), LRP4_HUMAN (O75096), LRP4_MOUSE (Q8VI56), LRP4_RAT (Q9QYP1), LRP5_HUMAN (O75197), LRP5_MOUSE (Q91VN0), LRP6_HUMAN (O75581), LRP6_MOUSE (O88572), LRP8_CHICK (Q98931), LRP8_HUMAN (Q14114), LRP8_MOUSE (Q924X6), LRP_CAEEL (Q04833), MFRP_HUMAN (Q9BY79), MFRP_MOUSE (Q8K480), NETO1_HUMAN (Q8TDF5), NETO1_MOUSE (Q8R4I7), NETO2_HUMAN (Q8NC67), NETO2_MOUSE (Q8BNJ6), NETO2_RAT (C6K2K4), NUDEL_DROME (P98159), PGBM_HUMAN (P98160), PGBM_MOUSE (Q05793), PROH4_APIME (P85831), RXFP1_HUMAN (Q9HBX9), RXFP1_MOUSE (Q6R6I7), RXFP1_PONAB (Q5R5V8), RXFP1_RAT (Q6R6I6), RXFP2_CANFA (Q5XM32), RXFP2_HUMAN (Q8WXD0), RXFP2_MOUSE (Q91ZZ5), SORL_CHICK (Q98930), SORL_HUMAN (Q92673), SORL_MOUSE (O88307), SORL_RABIT (Q95209), SPIT1_HUMAN (O43278), SPIT1_MOUSE (Q9R097), SSPO_BOVIN (P98167), SSPO_CHICK (Q2PC93), SSPO_HUMAN (A2VEC9), SSPO_MOUSE (Q8CG65), SSPO_RAT (Q700K0), ST14_BOVIN (Q0IIH7), ST14_HUMAN (Q9Y5Y6), ST14_MOUSE (P56677), TMPS2_HUMAN (O15393), TMPS2_MOUSE (Q9JIQ8), TMPS3_HUMAN (P57727), TMPS3_MOUSE (Q8K1T0), TMPS6_HUMAN (Q8IU80), TMPS6_MOUSE (Q9DBI0), TMPS7_HUMAN (Q7RTY8), TMPS7_MOUSE (Q8BIK6), TMPS7_RAT (P86091), TMPS9_HUMAN (Q7Z410), TMPS9_MOUSE (P69525), TMPS9_RAT (P69526), UNC52_CAEEL (Q06561), VGR_SOLIN (Q6X0I2), VLDLR_CHICK (P98165), VLDLR_HUMAN (P98155), VLDLR_MOUSE (P98156), VLDLR_RABIT (P35953), VLDLR_RAT (P98166), YL_DROME (P98163)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): ALK_HUMAN (Q9UM73), ALK_MOUSE (P97793), PKD1_HUMAN (P98161), PKD1_MOUSE (O08852), RSVR_COTJA (P98162), TMPS4_HUMAN (Q9NRS4), TMPS4_MOUSE (Q8VCA5), TMPSD_HUMAN (Q9BYE2), TMPSD_MOUSE (Q5U405), YL54_CAEEL (P34434)`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): LDLR_BOVIN (P01131)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
|
| PDB [Detailed view] |
1AJJ; 1CR8; 1D2J; 1D2L; 1F5Y; 1F8Z; 1J8E; 1LDL; 1LDR; 1N7D; 1V9U; 1XFE; 2FCW; 2FYJ; 2FYL; 2I1P; 2JM4; 2KNX; 2KNY; 2KRI; 2LGP; 2M0P; 3A7Q; 3DPR; 3M0C; 3OJY; 3P5C; 3T5O; 4A5W; 4E0S; |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)