PROSITE entry PS01213
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General information about the entry
Entry name [info] | GLOBIN_FAM_2 |
Accession [info] | PS01213 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00933 |
Name and characterization of the entry
Description [info] | Protozoan/cyanobacterial globins signature. |
Pattern [info] |
F-[LF]-x(4)-[GE]-G-[PAT]-x(2)-[YW]-x-[GSE]-[KRQAE]-x(1,5)-[LIVM]-x(3)-H. |
Numerical results [info]
Total number of hits | 18 in 18 different sequences |
Number of true positive hits | 18 in 18 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 90.00 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | heme(?) at position 15 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
18 sequences
TRHBN_MYCBO (P0A593), TRHBN_MYCPA (Q740T9), TRHBN_MYCSM (P0A594), TRHBN_MYCTO (P9WN24), TRHBN_MYCTU (P9WN25), TRHBN_NOSCO (Q00812), TRHBN_NOSSN (P52335), TRHBN_PARCA (P15160), TRHBN_SYNY3 (P73925), TRHBN_TETPY (P17724), TRHBN_TETTH (Q03459), TRHBO_BACSU (O31607), TRHBO_MYCBO (P0A596), TRHBO_MYCLE (Q9CC59), TRHBO_MYCTO (P9WN22), TRHBO_MYCTU (P9WN23), TRHN1_CHLMO (Q08753), TRHN2_CHLMO (P52334)» more
|
UniProtKB/Swiss-Prot False negative sequences |
2 sequences
GLB3_ARATH (Q67XG0), TRHBP_CAMJE (Q0PB48) |
PDB [Detailed view] |
28 PDB
1DLW; 1DLY; 1IDR; 1MWB; 1NGK; 1RTE; 1RTX; 1S56; 1S61; 1S69; 1S6A; 1UVX; 1UVY; 1UX8; 2GKM; 2GKN; 2GL3; 2GLN; 2HZ1; 2HZ2; 2HZ3; 2QRW; 3AQ5; 3AQ6; 3AQ7; 3AQ8; 3AQ9; 5AB8 » more |