Entry: PS01218

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General information about the entry

Entry name [info] TATC
Accession [info] PS01218
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00936

Name and characterization of the entry

Description [info] TatC family signature.
Pattern [info]
Y-x(2)-[FL]-[LIVMAFNT]-[LIVMAFT]-x-[LVSI]-x(4)-[GASF]-x(2)-F-[EQ]-
[LIVMFC]-P-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 15
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

TATCD_BACSU (P42252), TATCY_BACSU (O05523), TATC_AQUAE  (O67305), 
TATC_ARATH  (Q9SJV5), TATC_AZOCH  (P54085), TATC_BACHD  (Q9Z9P4), 
TATC_CAMJE  (Q9PHT8), TATC_CORK4  (C4LIK6), TATC_ECO57  (P69424), 
TATC_ECOL6  (Q8FBI6), TATC_ECOLI  (P69423), TATC_HAEIN  (P44560), 
TATC_HALNC  (D0KWI6), TATC_HELPJ  (Q9ZM59), TATC_HELPY  (O25701), 
TATC_KORVE  (Q1IN69), TATC_LISIN  (Q92ES8), TATC_MAGSM  (A0L833), 
TATC_MAIZE  (C4IZX0), TATC_MYCBO  (P66896), TATC_MYCLE  (P54078), 
TATC_MYCTO  (P9WG96), TATC_MYCTU  (P9WG97), TATC_ORYSJ  (Q9AVE6), 
TATC_PEA    (Q94G17), TATC_RICPR  (Q9ZCG6), TATC_SYNY3  (P54086), 
YCF43_CYACA (Q9TLS5), YCF43_GRATL (Q6B8S9), YCF43_GUITH (O78493), 
YCF43_ODOSI (P49538), YCF43_PORPU (P51264), YCF43_PYRYE (Q1XDM3), 
YMF16_NEPOL (Q9TC94), YMF16_RECAM (O21266)
» More

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

TATCO_HALVD (D4GZD0), TATCT_HALVD (D4GZC9), TATC_AKKM8  (B2UN92), 
TATC_BLASP  (D0J948), TATC_CARHZ  (Q3ADS0), TATC_CENSY  (A0RW14), 
TATC_DEHMV  (D2BJS8), TATC_DEIRA  (Q9RW63), TATC_DESAH  (C0QD59), 
TATC_FRASC  (Q2J9S4), TATC_PELCD  (Q3A8D5), TATC_RHOCB  (D5AT98), 
TATC_ROTMD  (D2NT99), TATC_UNCMA  (Q0W5V8), TATC_XYLCX  (D1BTU8)
» More

PDB
[Detailed view]
2 PDB

4HTS; 4HTT

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