Entry: PS01218

General information about the entry

Entry name [info] TATC
Accession [info] PS01218
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00936

Name and characterization of the entry

Description [info] TatC family signature.
Pattern [info]
Y-x(2)-[FL]-[LIVMAFNT]-[LIVMAFT]-x-[LVSI]-x(4)-[GASF]-x(2)-F-[EQ]-
[LIVMFC]-P-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 70.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

TATCD_BACSU (P42252), TATCY_BACSU (O05523), TATC_AQUAE  (O67305), 
TATC_ARATH  (Q9SJV5), TATC_AZOCH  (P54085), TATC_BACHD  (Q9Z9P4), 
TATC_CAMJE  (Q9PHT8), TATC_CORK4  (C4LIK6), TATC_ECO57  (P69424), 
TATC_ECOL6  (Q8FBI6), TATC_ECOLI  (P69423), TATC_HAEIN  (P44560), 
TATC_HALNC  (D0KWI6), TATC_HELPJ  (Q9ZM59), TATC_HELPY  (O25701), 
TATC_KORVE  (Q1IN69), TATC_LISIN  (Q92ES8), TATC_MAGSM  (A0L833), 
TATC_MAIZE  (C4IZX0), TATC_MYCBO  (P66896), TATC_MYCLE  (P54078), 
TATC_MYCTO  (P9WG96), TATC_MYCTU  (P9WG97), TATC_ORYSJ  (Q9AVE6), 
TATC_PEA    (Q94G17), TATC_RICPR  (Q9ZCG6), TATC_SYNY3  (P54086), 
YCF43_CYACA (Q9TLS5), YCF43_GRATL (Q6B8S9), YCF43_GUITH (O78493), 
YCF43_ODOSI (P49538), YCF43_PORPU (P51264), YCF43_PYRYE (Q1XDM3), 
YMF16_NEPOL (Q9TC94), YMF16_RECAM (O21266)
» More

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

TATCO_HALVD (D4GZD0), TATCT_HALVD (D4GZC9), TATC_AKKM8  (B2UN92), 
TATC_BLASP  (D0J948), TATC_CARHZ  (Q3ADS0), TATC_CENSY  (A0RW14), 
TATC_DEHMV  (D2BJS8), TATC_DEIRA  (Q9RW63), TATC_DESAH  (C0QD59), 
TATC_FRASC  (Q2J9S4), TATC_METAR  (Q0W5V8), TATC_PELCD  (Q3A8D5), 
TATC_RHOCB  (D5AT98), TATC_ROTMD  (D2NT99), TATC_XYLCX  (D1BTU8)
» More

PDB
[Detailed view]
2 PDB

4HTS; 4HTT

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