Entry: PS01238

General information about the entry
Entry name GDA1_CD39_NTPASE
Accession number PS01238
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00952
Name and characterization of the entry
DescriptionGDA1/CD39 family of nucleoside phosphatases signature.
Pattern [LIVM]-x-G-x(2)-E-G-x-[FYLS]-x-[FW]-[LIVA]-[TAG]-x-N-[HYF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 50 hits in 50 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 50 hits in 50 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 90.91 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
APY1_ARATH  (Q9SQG2), APY1_ORYSJ  (Q8H7L6), APY2_ARATH  (Q9SPM5), 
APY2_ORYSJ  (Q6Z4P2), APY3_ARATH  (Q9XI62), APY3_ORYSJ  (Q2QYE1), 
APY_SOLTU   (P80595), ENTP1_BOVIN (O18956), ENTP1_HUMAN (P49961), 
ENTP1_MOUSE (P55772), ENTP1_PIG   (Q9MYU4), ENTP1_RAT   (P97687), 
ENTP2_CHICK (P79784), ENTP2_HUMAN (Q9Y5L3), ENTP2_MOUSE (O55026), 
ENTP2_RAT   (O35795), ENTP3_HUMAN (O75355), ENTP4_HUMAN (Q9Y227), 
ENTP4_MOUSE (Q9DBT4), ENTP5_AILME (D2GZV9), ENTP5_BOVIN (E1BPW0), 
ENTP5_CHICK (E1C1L6), ENTP5_HUMAN (O75356), ENTP5_MESAU (Q9QYC8), 
ENTP5_MOUSE (Q9WUZ9), ENTP5_RAT   (Q6P6S9), ENTP6_HUMAN (O75354), 
ENTP6_RAT   (Q9ER31), ENTP7_HUMAN (Q9NQZ7), ENTP7_MOUSE (Q3TCT4), 
ENTP7_PONAB (Q5REF6), ENTP8_BOVIN (A0JND9), ENTP8_CHICK (O93295), 
ENTP8_HUMAN (Q5MY95), ENTP8_MOUSE (Q8K0L2), ENTP8_RAT   (Q5DRK1), 
GDA1_ASPFU  (Q8TGG8), GDA1_CANAL  (Q8TGH6), GDA1_KLULA  (Q9HEM6), 
GDA1_SCHPO  (Q9UT35), GDA1_YEAST  (P32621), MIG23_CAEBR (Q617Y0), 
MIG23_CAEEL (Q21815), NTP1_CAEEL  (Q18411), NTP1_TOXGO  (Q27893), 
NTP2_TOXGO  (Q27895), NTP4_TOXGO  (P52913), NTPA_PEA    (P52914), 
YND1_SCHPO  (Q9USP2), YND1_YEAST  (P40009)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
APY4_ARATH  (Q8H1D8), APY5_ARATH  (Q6NQA8), APY6_ARATH  (O80612), 
APY7_ARATH  (F4JSH1), UDA1_CAEEL  (Q9XU84)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 3CJ1; 3CJ7; 3CJ9; 3CJA; 3ZX0; 3ZX2; 3ZX3; 4A57; 4A59; 4A5A; 4A5B;

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