Entry: PS01246

General information about the entry

Entry name [info] UPF0003
Accession [info] PS01246
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00959

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0003 signature.
Pattern [info]
G-[STIF]-V-x(2)-[LIVM]-x(6)-[LIVMF]-x(3)-[DQT]-x(3)-[LIVH]-x-[LIV]-P-
[NW]-x(2)-[LIVMF]-[LIVFSTA]-x(5)-[NV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.45 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
21 sequences

MSCK_ECOLI  (P77338    ), MSCM_ECOLI  (P39285    ), MSCS_ECO57  (P0C0S2    ), 
MSCS_ECOLI  (P0C0S1    ), MSCS_EDWI9  (O52401    ), MSCS_SHIFL  (P0C0S3    ), 
MSMJL_METJA (Q58543    ), MSMJS_METJA (Q57634    ), Y1546_ARCFU (O28726    ), 
Y195A_HAEIN (Q57362    ), Y402_BUCBP  (Q89AB5    ), Y415_HELPJ  (Q9ZKG7    ), 
Y415_HELPY  (O25170    ), Y437_BUCAP  (Q8K9B1    ), Y452_BUCAI  (P57527    ), 
Y639_SYNY3  (Q55717    ), Y812_AQUAE  (O66994    ), YBIO_ECOLI  (P75783    ), 
YHDY_BACSU  (O07594    ), YNAI_ECO57  (P0AEB6    ), YNAI_ECOLI  (P0AEB5    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MSCS_WIGBR  (P0DKS1    )

		
PDB
[Detailed view]
6 PDB

2OAU; 2VV5; 4AGE; 4AGF; 4HWA; 5AJI

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