Entry: PS01246

General information about the entry

Entry name [info] UPF0003
Accession [info] PS01246
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00959

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0003 signature.
Pattern [info]
G-[STIF]-V-x(2)-[LIVM]-x(6)-[LIVMF]-x(3)-[DQT]-x(3)-[LIVH]-x-[LIV]-P-
[NW]-x(2)-[LIVMF]-[LIVFSTA]-x(5)-[NV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.45 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
21 sequences

MSCK_ECOLI  (P77338), MSCM_ECOLI  (P39285), MSCS_ECO57  (P0C0S2), 
MSCS_ECOLI  (P0C0S1), MSCS_EDWI9  (O52401), MSCS_SHIFL  (P0C0S3), 
MSMJL_METJA (Q58543), MSMJS_METJA (Q57634), Y1546_ARCFU (O28726), 
Y195A_HAEIN (Q57362), Y402_BUCBP  (Q89AB5), Y415_HELPJ  (Q9ZKG7), 
Y415_HELPY  (O25170), Y437_BUCAP  (Q8K9B1), Y452_BUCAI  (P57527), 
Y639_SYNY3  (Q55717), Y812_AQUAE  (O66994), YBIO_ECOLI  (P75783), 
YHDY_BACSU  (O07594), YNAI_ECO57  (P0AEB6), YNAI_ECOLI  (P0AEB5)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MSCS_WIGBR  (P0DKS1)

		
PDB
[Detailed view]
5 PDB

2OAU; 2VV5; 4AGE; 4AGF; 4HWA

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission