Entry: PS01246

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General information about the entry

Entry name [info] UPF0003
Accession [info] PS01246
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00959

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0003 signature.
Pattern [info]
G-[STIF]-V-x(2)-[LIVM]-x(6)-[LIVMF]-x(3)-[DQT]-x(3)-[LIVH]-x-[LIV]-P-
[NW]-x(2)-[LIVMF]-[LIVFSTA]-x(5)-[NV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 21 in 21 different sequences
Number of true positive hits 21 in 21 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.45 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
21 sequences

MSCK_ECOLI  (P77338), MSCM_ECOLI  (P39285), MSCS_ECO57  (P0C0S2), 
MSCS_ECOLI  (P0C0S1), MSCS_EDWI9  (O52401), MSCS_SHIFL  (P0C0S3), 
MSMJL_METJA (Q58543), MSMJS_METJA (Q57634), Y1546_ARCFU (O28726), 
Y195A_HAEIN (Q57362), Y402_BUCBP  (Q89AB5), Y415_HELPJ  (Q9ZKG7), 
Y415_HELPY  (O25170), Y437_BUCAP  (Q8K9B1), Y452_BUCAI  (P57527), 
Y639_SYNY3  (Q55717), Y812_AQUAE  (O66994), YBIO_ECOLI  (P75783), 
YHDY_BACSU  (O07594), YNAI_ECO57  (P0AEB6), YNAI_ECOLI  (P0AEB5)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MSCS_WIGBR  (P0DKS1)

		
PDB
[Detailed view]
5 PDB

2OAU; 2VV5; 4AGE; 4AGF; 4HWA

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