Entry: PS01250

General information about the entry
Entry name CHH_MIH_GIH
Accession number PS01250
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00963
Name and characterization of the entry
DescriptionArthropod CHH/MIH/GIH neurohormones family signature.
Pattern [LIVM]-x(3)-C-[KR]-x-[DENGRH]-C-[FY]-x-[STN]-x(2)-F-x(2)-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 51 hits in 51 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 51 hits in 51 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,disulfide
  • `Interesting' site in the pattern: 7,disulfide
  • `Interesting' site in the pattern: 14,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CHH1_MACRS  (P81206), CHH1_ORCLI  (Q25589), CHH1_PENJP  (O15980), 
CHH1_PENMO  (O97383), CHH2_ORCLI  (Q25588), CHH2_PENJP  (Q9U5D2), 
CHH2_PENMO  (O97384), CHH3_PENJP  (Q94676), CHH3_PENMO  (O97385), 
CHH4_PENMO  (O97386), CHH5_PENJP  (O15981), CHH5_PENMO  (O97387), 
CHH6_PENJP  (P81700), CHH7_PENJP  (O15982), CHHA_CHEDE  (P83485), 
CHHA_HOMAM  (P19806), CHHB_CHEDE  (P83486), CHHB_HOMAM  (Q25154), 
CHHB_METEN  (Q9NGP0), CHHL_BOMMO  (Q9NL55), CHH_ARMVU   (P30814), 
CHH_ASTFL   (P83800), CHH_CANPG   (P81032), CHH_CARMA   (P14944), 
CHH_JASLA   (P56687), CHH_LITSH   (P59685), CHH_LITVA   (Q26181), 
CHH_MACLE   (O77220), CHH_PROBO   (P55845), CHH_PROCL   (Q25683), 
GIH_HOMAM   (P55320), ITPL_SCHGR  (Q26492), ITP_SCHGR   (Q26491), 
MIH_CALSI   (P55321), MIH_CANPG   (P55846), MIH_CARMA   (Q27225), 
MIH_CHAFE   (O96605), MIH_JASLA   (P83220), MIH_LITVA   (P55322), 
MIH_METEN   (O76534), MIH_METMG   (O61389), MIH_ORCLI   (P83636), 
MIH_PENJP   (P55847), MIH_PROBO   (Q10987), MIH_PROCL   (P55848), 
MOIH1_CANPG (P81034), MOIH2_CANPG (P81035), MOIH_LIBEM  (P56688), 
TXAL2_LATTR (Q4U4N3), VIH_ARMVU   (P83627), YH82_CAEEL  (Q23247)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1J0T;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or