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PROSITE entry PS01261

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General information about the entry

Entry name [info]	UPF0020
Accession [info]	PS01261
Entry type [info]	PATTERN
Date [info]	01-NOV-1997 CREATED; 01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00969

Name and characterization of the entry

Description [info]	Uncharacterized protein family UPF0020 signature.
Pattern [info]	D-P-[LIVMF]-C-G-[ST]-G-x(3)-[LI]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	152 in 152 different sequences
Number of true positive hits	152 in 152 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	28
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	84.44 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

152 sequences

RLMKL_ACIAD (Q6FCR7), RLMKL_ACIBC (B2HWX8), RLMKL_ACIBS (B0VLH0),

RLMKL_ACIBY (B0VAL5), RLMKL_ACTP2 (A3MYD2), RLMKL_ACTP7 (B3GZQ0), 
RLMKL_ACTPJ (B0BRL8), RLMKL_ACTSZ (A6VMR3), RLMKL_AERS4 (A4SME4), 
RLMKL_ALCBS (Q0VQU5), RLMKL_ALIF1 (Q5E5B4), RLMKL_ALIFM (B5FE19), 
RLMKL_ALISL (B6ELD3), RLMKL_ALKEH (Q0A793), RLMKL_ALLVD (Q1W3E0), 
RLMKL_BUCAI (P57444), RLMKL_BUCAP (Q8K9I4), RLMKL_CITK8 (A8AID1), 
RLMKL_COLP3 (Q47Z09), RLMKL_CROS8 (A7MEX5), RLMKL_DESPS (Q6AQA5), 
RLMKL_ECO24 (A7ZK52), RLMKL_ECO57 (Q8XDB2), RLMKL_ECO5E (B5YT79), 
RLMKL_ECODH (B1X8Q2), RLMKL_ECOHS (A7ZYQ0), RLMKL_ECOK1 (A1A9L8), 
RLMKL_ECOL5 (Q0TJB3), RLMKL_ECOL6 (Q8FJ88), RLMKL_ECOLC (B1IVY4), 
RLMKL_ECOLI (P75864), RLMKL_ECOSM (B1LJR4), RLMKL_ECOUT (Q1RDR6), 
RLMKL_ENT38 (A4W8W0), RLMKL_ERWT9 (B2VDF6), RLMKL_FRAP2 (B0U0U4), 
RLMKL_FRAT1 (Q14HS5), RLMKL_FRATF (A7NCY2), RLMKL_FRATH (Q2A2U4), 
RLMKL_FRATM (B2SGG3), RLMKL_FRATN (A0Q621), RLMKL_FRATO (Q0BLC3), 
RLMKL_FRATT (Q5NGC3), RLMKL_FRATW (A4IXN4), RLMKL_HAEDU (Q7VP04), 
RLMKL_HAEI8 (Q4QP66), RLMKL_HAEIE (A5UB28), RLMKL_HAEIG (A5UFS2), 
RLMKL_HAEIN (P44524), RLMKL_HISS1 (Q0I4C6), RLMKL_HISS2 (B0UUM5), 
RLMKL_IDILO (Q5QX63), RLMKL_KLEP3 (B5XY56), RLMKL_KLEP7 (A6T742), 
RLMKL_LEGPA (Q5X969), RLMKL_LEGPC (A5I9H3), RLMKL_LEGPH (Q5ZZI8), 
RLMKL_LEGPL (Q5X0J6), RLMKL_MAGMM (A0L8B5), RLMKL_MANSM (Q65UK6), 
RLMKL_PASMU (Q9CNW9), RLMKL_PECAS (Q6D459), RLMKL_PHOLL (Q7N612), 
RLMKL_PHOPR (Q6LRA0), RLMKL_PROMH (B4EVC6), RLMKL_PSYA2 (Q4FTN9), 
RLMKL_PSYCK (Q1QCP8), RLMKL_PSYIN (A1SX09), RLMKL_PSYWF (A5WGC0), 
RLMKL_SACD2 (Q21JW7), RLMKL_SALA4 (B5F1U5), RLMKL_SALAR (A9MHU0), 
RLMKL_SALCH (Q57QU1), RLMKL_SALDC (B5FQZ1), RLMKL_SALEP (B5QZF1), 
RLMKL_SALG2 (B5R6B4), RLMKL_SALHS (B4TDY8), RLMKL_SALNS (B4T1Z1), 
RLMKL_SALPA (Q5PGE3), RLMKL_SALPB (A9N6Y0), RLMKL_SALPK (B5BBL9), 
RLMKL_SALSV (B4TRX1), RLMKL_SALTI (Q8Z7S6), RLMKL_SALTY (Q8ZQ73), 
RLMKL_SERP5 (A8GCK7), RLMKL_SHEAM (A1S601), RLMKL_SHEB5 (A3D5Q0), 
RLMKL_SHEB8 (A6WPK6), RLMKL_SHEB9 (A9L591), RLMKL_SHEDO (Q12LC6), 
RLMKL_SHEFN (Q07ZR3), RLMKL_SHEHH (B0TIX7), RLMKL_SHELP (A3QDY0), 
RLMKL_SHEON (Q8EFW4), RLMKL_SHEPA (A8H3Y1), RLMKL_SHEPC (A4Y5X4), 
RLMKL_SHESA (A0KVL6), RLMKL_SHESH (A8FW59), RLMKL_SHESM (Q0HJZ9), 
RLMKL_SHESR (Q0HWA0), RLMKL_SHESW (A1RKM2), RLMKL_SHEWM (B1KDN0), 
RLMKL_SHIB3 (B2TUD1), RLMKL_SHIBS (Q31YL1), RLMKL_SHIDS (Q32HV8), 
RLMKL_SHIF8 (Q0T686), RLMKL_SHIFL (Q83RX5), RLMKL_SHISS (Q3Z3H3), 
RLMKL_SODGM (Q2NU80), RLMKL_STRM5 (B4SQ79), RLMKL_STRMK (B2FJ58), 
RLMKL_SYNC1 (Q3A2U5), RLMKL_VIBC1 (A7N0M8), RLMKL_VIBC3 (A5F836), 
RLMKL_VIBCH (Q9KRZ5), RLMKL_VIBPA (Q87PC0), RLMKL_VIBVY (Q7MKX1), 
RLMKL_XANAC (Q8PM40), RLMKL_XANC8 (Q4UT85), RLMKL_XANCB (B0RV07), 
RLMKL_XANCP (Q8PAE0), RLMKL_XANE5 (Q3BV47), RLMKL_XANOM (Q2P309), 
RLMKL_XANOP (B2SIS8), RLMKL_XANOR (Q5H029), RLMKL_XYLF2 (B2IA87), 
RLMKL_XYLFA (Q9PA69), RLMKL_XYLFM (B0U5Z5), RLMKL_XYLFT (Q87A16), 
RLMKL_YERE8 (A1JMQ6), RLMKL_YERP3 (A7FJT9), RLMKL_YERPA (Q1CA41), 
RLMKL_YERPB (B2JYS1), RLMKL_YERPE (Q7CHK7), RLMKL_YERPG (A9R7L5), 
RLMKL_YERPN (Q1CGJ3), RLMKL_YERPP (A4TMZ0), RLMKL_YERPS (Q66CG1), 
RLMKL_YERPY (B1JQR7), RLML_NEIMB  (Q9K0V4), THUM3_BOVIN (Q2T9W2), 
THUM3_HUMAN (Q9BV44), THUM3_MOUSE (P97770), TMG10_ARCFU (O29011), 
TMG10_METJA (Q58120), TMG10_METTH (O26820), TMG10_METTL (P05409), 
TRM14_ARCFU (O28105), TRM14_METJA (Q57880), TRM14_PYRFU (Q8U248), 
Y064_SYNY3  (Q55156), YPSC_BACSU  (P50840)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

28 sequences

RLMKL_AERHH (A0KKK7), RLMKL_ALTMD (B4RZ48), RLMKL_CELJU (B3PIL6),

RLMKL_CHRSD (Q1QXV9), RLMKL_DICNV (A5EX48), RLMKL_HAHCH (Q2SCH1), 
RLMKL_HYDCU (Q31IC8), RLMKL_MARMS (A6VW36), RLMKL_MARN8 (A1TZG2), 
RLMKL_METCA (Q60AX5), RLMKL_PSE14 (Q48JX8), RLMKL_PSEA6 (Q15UB5), 
RLMKL_PSEA7 (A6V328), RLMKL_PSEAE (Q9HZG0), RLMKL_PSEE4 (Q1ICL2), 
RLMKL_PSEF5 (Q4KFI6), RLMKL_PSEMY (A4XWP8), RLMKL_PSEP1 (A5W6K7), 
RLMKL_PSEPF (Q3KFC5), RLMKL_PSEPG (B0KG92), RLMKL_PSEPK (Q88L39), 
RLMKL_PSEPW (B1J5B7), RLMKL_PSESM (Q883N9), RLMKL_PSET1 (Q3IGZ3), 
RLMKL_PSEU2 (Q4ZUM1), RLMKL_STUS1 (A4VM39), TMG10_PYRAB (Q9UY84), 
TRMN_THET2  (Q72IH5)

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PDB
[Detailed view]

8 PDB

3TLJ; 3TM4; 3TM5; 3V8V; 3V97; 6ZXV; 6ZXW; 6ZXY