Entry: PS01268

Forthcoming changes to the profile format
General information about the entry

Entry name [info] UPF0024
Accession [info] PS01268
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00975

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0024 signature.
Pattern [info]
G-x-K-D-[KRAT]-x-[AG]-[LVRSIT]-[TKS]-x-Q-x-[LIVF]-[SGCYAT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 189 in 189 different sequences
Number of true positive hits 189 in 189 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.50 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
189 sequences

PUS7_BOVIN  (Q08DI8), PUS7_HUMAN  (Q96PZ0), PUS7_YEAST  (Q08647), 
TRUD1_METJA (Q58008), TRUD1_METMP (Q6M1A3), TRUD2_METJA (Q58759), 
TRUD2_METMP (Q6LZL0), TRUD_ACTSZ  (A6VR02), TRUD_AERHH  (A0KGH7), 
TRUD_AERS4  (A4SRB7), TRUD_ALISL  (B6EKL4), TRUD_ANAD2  (B8J7C8), 
TRUD_ANADE  (Q2IFQ4), TRUD_ANADF  (A7HGV2), TRUD_AQUAE  (O67616), 
TRUD_ARCFU  (O28596), TRUD_AZOVD  (C1DSR9), TRUD_CAMJ8  (A8FNC4), 
TRUD_CAMJD  (A7H5G6), TRUD_CAMJE  (Q9PMK3), TRUD_CAMJJ  (A1W165), 
TRUD_CAMJR  (Q5HSX3), TRUD_CELJU  (B3PJA9), TRUD_CHRSD  (Q1QU75), 
TRUD_CITK8  (A8ANV9), TRUD_COLP3  (Q487E7), TRUD_CROS8  (A7MJ59), 
TRUD_DEIRA  (Q9RSX8), TRUD_ECO24  (A7ZQI9), TRUD_ECO27  (B7UHG4), 
TRUD_ECO45  (B7MKL9), TRUD_ECO55  (B7LEG3), TRUD_ECO57  (Q8X7Y6), 
TRUD_ECO5E  (B5Z3A7), TRUD_ECO7I  (B7NT89), TRUD_ECO81  (B7MZ46), 
TRUD_ECO8A  (B7LXF7), TRUD_ECOBW  (C4ZZP9), TRUD_ECODH  (B1XCS1), 
TRUD_ECOHS  (A8A3M4), TRUD_ECOK1  (A1AET9), TRUD_ECOL5  (Q0TEB3), 
TRUD_ECOL6  (Q8FEJ7), TRUD_ECOLC  (B1IUT4), TRUD_ECOLI  (Q57261), 
TRUD_ECOLU  (B7N6X5), TRUD_ECOSE  (B6I6D5), TRUD_ECOSM  (B1LQ65), 
TRUD_ECOUT  (Q1R7U6), TRUD_EDWI9  (C5BGI9), TRUD_ENT38  (A4WDV0), 
TRUD_ERWT9  (B2VFZ5), TRUD_ESCF3  (B7LWL0), TRUD_GEODF  (B9M644), 
TRUD_GEOMG  (Q39R76), TRUD_GEOSL  (P60347), TRUD_GEOSM  (C6E4K4), 
TRUD_HAEI8  (Q4QML9), TRUD_HAEIE  (A5UE25), TRUD_HAEIN  (P44039), 
TRUD_HALMA  (Q5V1E6), TRUD_HALS3  (B0R2Y4), TRUD_HALSA  (Q9HSG5), 
TRUD_HELAH  (Q17WX3), TRUD_HELHP  (P59892), TRUD_HELP2  (B6JME7), 
TRUD_HELPG  (B5Z7T0), TRUD_HELPH  (Q1CSU8), TRUD_HELPJ  (Q9ZKS5), 
TRUD_HELPS  (B2UU74), TRUD_HELPY  (P55985), TRUD_HISS1  (Q0I5H8), 
TRUD_HISS2  (B0URU7), TRUD_IDILO  (Q5QUC5), TRUD_KLEP3  (B5XV36), 
TRUD_KLEP7  (A6TD37), TRUD_LEGPA  (Q5X4T2), TRUD_LEGPC  (A5ICB9), 
TRUD_LEGPH  (Q5ZV19), TRUD_LEGPL  (Q5WWQ2), TRUD_LEPIC  (Q72N01), 
TRUD_LEPIN  (Q8F8N2), TRUD_MANSM  (Q65Q80), TRUD_MARAV  (A1TZ52), 
TRUD_META3  (A6UV17), TRUD_METAC  (Q8TKX2), TRUD_METBF  (Q466V2), 
TRUD_METBU  (Q12WH6), TRUD_METCA  (Q604M0), TRUD_METKA  (Q8TXJ7), 
TRUD_METM5  (A4FYL2), TRUD_METMA  (Q8Q0M2), TRUD_METTH  (O27572), 
TRUD_NANEQ  (P60348), TRUD_NATPD  (Q3IMF3), TRUD_NITOC  (Q3JCS7), 
TRUD_NITSB  (A6Q2U7), TRUD_PASMU  (Q9CKK4), TRUD_PECAS  (Q6D1B5), 
TRUD_PECCP  (C6DDG0), TRUD_PELCD  (Q3A6I8), TRUD_PHOLL  (Q7N8K5), 
TRUD_PHOPR  (Q6LMT5), TRUD_PICTO  (Q6L1R2), TRUD_PROMH  (B4F225), 
TRUD_PSE14  (Q48F86), TRUD_PSEA7  (A6V1G2), TRUD_PSEA8  (B7V8C2), 
TRUD_PSEAB  (Q02R98), TRUD_PSEAE  (Q9HY04), TRUD_PSEE4  (Q1I653), 
TRUD_PSEF5  (Q4KHE9), TRUD_PSEFS  (C3K704), TRUD_PSEMY  (A4XWR3), 
TRUD_PSEP1  (A5W822), TRUD_PSEPF  (Q3KH85), TRUD_PSEPG  (B0KSC6), 
TRUD_PSEPK  (Q88MF2), TRUD_PSEPW  (B1JB31), TRUD_PSESM  (Q886L6), 
TRUD_PSEU2  (Q4ZWQ1), TRUD_PSEU5  (A4VJV1), TRUD_PSYA2  (Q4FR14), 
TRUD_PYRAB  (Q9V107), TRUD_PYRAE  (Q8ZTR2), TRUD_PYRFU  (Q8U0N1), 
TRUD_PYRHO  (O59207), TRUD_PYRIL  (A1RRV7), TRUD_PYRNV  (B1Y9W7), 
TRUD_SALA4  (B5F409), TRUD_SALAR  (A9MF30), TRUD_SALCH  (Q57KJ6), 
TRUD_SALDC  (B5FTS3), TRUD_SALEP  (B5QW16), TRUD_SALG2  (B5RDQ1), 
TRUD_SALHS  (B4TFW5), TRUD_SALNS  (B4T455), TRUD_SALPA  (Q5PEG3), 
TRUD_SALPB  (A9N2D1), TRUD_SALPC  (C0PXA5), TRUD_SALPK  (B5BEY2), 
TRUD_SALSV  (B4TTV9), TRUD_SALTI  (Q8Z473), TRUD_SALTY  (Q8ZMF8), 
TRUD_SERP5  (A8G9Z4), TRUD_SHEON  (Q8EBR4), TRUD_SHIB3  (B2TZI6), 
TRUD_SHIBS  (Q31XA7), TRUD_SHIDS  (Q32CI5), TRUD_SHIF8  (Q0T1H6), 
TRUD_SHIFL  (Q83QE3), TRUD_SHISS  (Q3YYB7), TRUD_SULSO  (Q980V2), 
TRUD_SULTO  (Q976I1), TRUD_THEAC  (Q9HLL3), TRUD_THEGJ  (C5A1W0), 
TRUD_THEKO  (Q5JDB6), TRUD_THEON  (B6YTE4), TRUD_THESM  (C6A1K9), 
TRUD_THEVO  (Q978K9), TRUD_VIBC3  (A5F9D8), TRUD_VIBCB  (A7MTT9), 
TRUD_VIBCH  (Q9KUJ0), TRUD_VIBCM  (C3LS20), TRUD_VIBF1  (Q5E330), 
TRUD_VIBFM  (B5FAF5), TRUD_VIBPA  (Q87LQ4), TRUD_VIBVU  (Q8DC58), 
TRUD_VIBVY  (Q7MHQ6), TRUD_WOLSU  (P59893), TRUD_XANAC  (Q8PLR6), 
TRUD_XANC5  (Q3BUS6), TRUD_XANC8  (Q4UTP6), TRUD_XANCB  (B0RU01), 
TRUD_XANCP  (Q8P9Y9), TRUD_XANOM  (Q2P1L2), TRUD_XANOR  (Q5GYK8), 
TRUD_YERE8  (A1JJT6), TRUD_YERP3  (A7FLX6), TRUD_YERPA  (Q1C476), 
TRUD_YERPB  (B2K579), TRUD_YERPE  (Q8ZBP8), TRUD_YERPG  (A9R117), 
TRUD_YERPN  (Q1CLR4), TRUD_YERPP  (A4TPZ9), TRUD_YERPS  (Q66EC1), 
TRUD_YERPY  (B1JJF6), YH2X_SCHPO  (O74343), YQ4B_CAEEL  (Q17426)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

PUS7L_DANRE (Q1L8I0), PUS7L_HUMAN (Q9H0K6), PUS7L_MOUSE (Q8CE46), 
TRUD_METVS  (A6USB0), TRUD_PSEA6  (Q15P29), TRUD_PSEHT  (Q3IDQ4), 
TRUD_PYRAR  (A4WLG8), TRUD_SULDN  (Q30RS1), TRUD_THET2  (Q72IG5), 
TRUD_THET8  (Q5SI49), TRUD_THICR  (Q31J61)
» More

PDB
[Detailed view]
4 PDB

1SB7; 1SI7; 1SZW; 1Z2Z

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission