Entry: PS01273

General information about the entry
Entry name COA_TRANSF_1
Accession number PS01273
Entry type PATTERN
Date NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00980
Name and characterization of the entry
DescriptionCoenzyme A transferases signature 1.
Pattern [DN]-[GN]-x(2)-[LIVMFA](3)-G-G-F-x(3)-G-x-P.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 23 hits in 23 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 23 hits in 23 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 95.83 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ATOD_ECOLI  (P76458), ATOD_HAEIN  (P44875), CTFA_CLOAB  (P33752), 
PCAI_ACIAD  (Q43973), PCAI_PSEPU  (Q01103), SCO2A_MOUSE (Q9JJN4), 
SCO2A_RAT   (Q5XIJ9), SCO2B_MOUSE (Q9ESL0), SCOA_BACSU  (P42315), 
SCOA_HELPJ  (Q9ZLE3), SCOA_HELPY  (P56006), SCOA_MYCBO  (P63649), 
SCOA_MYCTU  (P63648), SCOA_XANCB  (B0RVK4), SCOA_XANCP  (P0C7I7), 
SCOT1_HUMAN (P55809), SCOT1_MOUSE (Q9D0K2), SCOT1_PIG   (Q29551), 
SCOT1_RAT   (B2GV06), SCOT2_HUMAN (Q9BYC2), SCOT_CAEEL  (Q09450), 
SCOT_DICDI  (Q54JD9), YODS_BACSU  (O34317)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CATI_PSESB  (Q8VPF3)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1K6D; 1M3E; 1O9L; 1OOY; 1OOZ; 1OPE; 2NRB; 2NRC; 3CDK; 3DLX; 3K6M; 3OXO; 3RRL;

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