Entry: PS01285

General information about the entry
Entry name FA58C_1
Accession number PS01285
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00988
Name and characterization of the entry
DescriptionCoagulation factors 5/8 type C domain (FA58C) signature 1.
Pattern [GASP]-W-x(7,15)-[FYW]-[LIV]-x-[LIVFA]-[GSTDEN]-x(6)-[LIVF]-x(2)-[IV]-x- [LIVT]-[QKMT]-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 102 hits in 73 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 102 hits in 73 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 9
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 91.89 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AEBP1_HUMAN (Q8IUX7), AEBP1_MOUSE (Q640N1), AEBP1_RAT   (A2RUV9), 
CNT3B_HUMAN (Q96NU0), CNTP1_HUMAN (P78357), CNTP1_MOUSE (O54991), 
CNTP1_RAT   (P97846), CNTP2_HUMAN (Q9UHC6), CNTP2_MOUSE (Q9CPW0), 
CNTP2_PONAB (Q5RD64), CNTP3_HUMAN (Q9BZ76), CNTP4_HUMAN (Q9C0A0), 
CNTP4_MOUSE (Q99P47), CNTP5_CHICK (Q0V8S9), CPXM1_MOUSE (Q9Z100), 
CPXM2_HUMAN (Q8N436), CPXM2_MOUSE (Q9D2L5), CTP5A_MOUSE (Q0V8T9), 
CTP5A_RAT   (Q0V8T6), CTP5B_MOUSE (Q0V8T8), CTP5B_RAT   (Q0V8T5), 
CTP5C_RAT   (Q0V8T4), CTP5D_RAT   (Q0V8T3), DCBD1_HUMAN (Q8N8Z6), 
DCBD2_HUMAN (Q96PD2), DCBD2_MOUSE (Q91ZV3), DCBD2_RAT   (Q91ZV2), 
DDR1_HUMAN  (Q08345), DDR1_MOUSE  (Q03146), DDR1_PANTR  (Q7YR43), 
DDR1_RAT    (Q63474), DDR2_HUMAN  (Q16832), DDR2_MOUSE  (Q62371), 
DIS1A_DICDI (P02886), DIS1B_DICDI (P02887), DIS1D_DICDI (P02888), 
DIS2_DICDI  (P42530), EDIL3_HUMAN (O43854), EDIL3_MOUSE (O35474), 
EDIL3_PONAB (Q5R7K9), FA5V_OXYMI  (Q58L90), FA5V_OXYSU  (Q58L91), 
FA5V_PSETE  (Q7SZN0), FA5_BOVIN   (Q28107), FA5_HUMAN   (P12259), 
FA5_MOUSE   (O88783), FA5_PIG     (Q9GLP1), FA5_PSETE   (Q593B6), 
FA8_CANFA   (O18806), FA8_HUMAN   (P00451), FA8_MOUSE   (Q06194), 
FA8_PIG     (P12263), HMCT_BOMMO  (P98092), MFGM_BOVIN  (Q95114), 
MFGM_HUMAN  (Q08431), MFGM_MOUSE  (P21956), MFGM_PIG    (P79385), 
MFGM_RAT    (P70490), NRP1A_DANRE (Q8QFX6), NRP1_CHICK  (P79795), 
NRP1_HUMAN  (O14786), NRP1_MOUSE  (P97333), NRP1_RAT    (Q9QWJ9), 
NRP1_XENLA  (P28824), NRP2_HUMAN  (O60462), NRP2_MOUSE  (O35375), 
NRP2_RAT    (O35276), NRX4_DROME  (Q94887), SSPO_BOVIN  (P98167), 
SSPO_CHICK  (Q2PC93), XLRS1_HUMAN (O15537), XLRS1_MOUSE (Q9Z1L4), 
XLRS1_TAKRU (Q9W6R5)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AFTD_MYCS2  (A0QPD4), AFTD_MYCTU  (P96419), CNTP5_CANFA (Q0V8T0), 
CNTP5_HUMAN (Q8WYK1), CPXM1_HUMAN (Q96SM3), CTP5C_MOUSE (Q0V8T7), 
SSPO_HUMAN  (A2VEC9), SSPO_MOUSE  (Q8CG65), SSPO_RAT    (Q700K0)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1CZS; 1CZT; 1CZV; 1D7P; 1FV4; 1IQD; 1KEX; 1SDD; 1Y61; 2L9L; 2ORX; 2ORZ; 2PQS; 2QQI; 2QQJ; 2QQK; 2QQL; 2QQM; 2QQN; 2QQO; 2R7E; 2VM9; 2VMC; 2VMD; 2VME; 2W94; 2W95; 2WN2; 2WN3; 2WUH; 2Z4F; 3BN6; 3CDZ; 3HNB; 3HNY; 3HOB; 3I97; 4AG4; 4DEQ; 4GZ9;

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