Entry: PS01286

General information about the entry
Entry name FA58C_2
Accession number PS01286
Entry type PATTERN
Date NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00988
Name and characterization of the entry
DescriptionCoagulation factors 5/8 type C domain (FA58C) signature 2.
Pattern P-x(8,10)-[LM]-R-x-[GE]-[LIVP]-x-G-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 90 hits in 64 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 88 hits in 62 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 20
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 97.78 %
  • Recall (true hits / (true hits + false negatives)): 81.48 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 2
  • `Interesting' site in the pattern: 10,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AEBP1_HUMAN (Q8IUX7), AEBP1_MOUSE (Q640N1), AEBP1_RAT   (A2RUV9), 
CNT3B_HUMAN (Q96NU0), CNTP1_HUMAN (P78357), CNTP1_MOUSE (O54991), 
CNTP1_RAT   (P97846), CNTP2_HUMAN (Q9UHC6), CNTP2_MOUSE (Q9CPW0), 
CNTP2_PONAB (Q5RD64), CNTP3_HUMAN (Q9BZ76), CNTP4_HUMAN (Q9C0A0), 
CNTP4_MOUSE (Q99P47), CNTP5_CANFA (Q0V8T0), CNTP5_CHICK (Q0V8S9), 
CNTP5_HUMAN (Q8WYK1), CPXM2_HUMAN (Q8N436), CPXM2_MOUSE (Q9D2L5), 
CTP5B_MOUSE (Q0V8T8), CTP5B_RAT   (Q0V8T5), CTP5C_MOUSE (Q0V8T7), 
CTP5C_RAT   (Q0V8T4), CTP5D_RAT   (Q0V8T3), DDR1_HUMAN  (Q08345), 
DDR1_MOUSE  (Q03146), DDR1_PANTR  (Q7YR43), DDR1_RAT    (Q63474), 
DDR2_HUMAN  (Q16832), DDR2_MOUSE  (Q62371), EDIL3_HUMAN (O43854), 
EDIL3_MOUSE (O35474), EDIL3_PONAB (Q5R7K9), FA5V_OXYMI  (Q58L90), 
FA5V_OXYSU  (Q58L91), FA5V_PSETE  (Q7SZN0), FA5_BOVIN   (Q28107), 
FA5_HUMAN   (P12259), FA5_MOUSE   (O88783), FA5_PIG     (Q9GLP1), 
FA5_PSETE   (Q593B6), FA8_CANFA   (O18806), FA8_HUMAN   (P00451), 
FA8_MOUSE   (Q06194), FA8_PIG     (P12263), HMCT_BOMMO  (P98092), 
MFGM_BOVIN  (Q95114), MFGM_HUMAN  (Q08431), MFGM_MOUSE  (P21956), 
MFGM_PIG    (P79385), MFGM_RAT    (P70490), NRP1A_DANRE (Q8QFX6), 
NRP1_CHICK  (P79795), NRP1_HUMAN  (O14786), NRP1_MOUSE  (P97333), 
NRP1_RAT    (Q9QWJ9), NRP1_XENLA  (P28824), NRP2_HUMAN  (O60462), 
NRP2_MOUSE  (O35375), NRP2_RAT    (O35276), NRX4_DROME  (Q94887), 
SSPO_BOVIN  (P98167), SSPO_CHICK  (Q2PC93)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AFTD_MYCS2  (A0QPD4), AFTD_MYCTU  (P96419), CPXM1_HUMAN (Q96SM3), 
CPXM1_MOUSE (Q9Z100), CTP5A_MOUSE (Q0V8T9), CTP5A_RAT   (Q0V8T6), 
DCBD1_HUMAN (Q8N8Z6), DCBD2_HUMAN (Q96PD2), DCBD2_MOUSE (Q91ZV3), 
DCBD2_RAT   (Q91ZV2), DIS1A_DICDI (P02886), DIS1B_DICDI (P02887), 
DIS1D_DICDI (P02888), DIS2_DICDI  (P42530), SSPO_HUMAN  (A2VEC9), 
SSPO_MOUSE  (Q8CG65), SSPO_RAT    (Q700K0), XLRS1_HUMAN (O15537), 
XLRS1_MOUSE (Q9Z1L4), XLRS1_TAKRU (Q9W6R5)
False positive hits (sequences which do not belong to the set under consideration):
TECTA_HUMAN (O75443), TECTA_MOUSE (O08523)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1CZS; 1CZT; 1CZV; 1D7P; 1FV4; 1IQD; 1KEX; 1SDD; 1Y61; 2L9L; 2ORX; 2ORZ; 2PQS; 2QQI; 2QQJ; 2QQK; 2QQL; 2QQM; 2QQN; 2QQO; 2R7E; 2WUH; 2Z4F; 3BN6; 3CDZ; 3HNB; 3HNY; 3HOB; 3I97; 4AG4; 4DEQ; 4GZ9;

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