Entry: PS01286

Forthcoming changes to the profile format
General information about the entry

Entry name [info] FA58C_2
Accession [info] PS01286
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00988

Name and characterization of the entry

Description [info] Coagulation factors 5/8 type C domain (FA58C) signature 2.
Pattern [info]
P-x(8,10)-[LM]-R-x-[GE]-[LIVP]-x-G-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 90 in 64 different sequences
Number of true positive hits 88 in 62 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 22
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.78 %
Recall (true positives / (true positives + false negatives)) 80.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] disulfide at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
62 sequences

AEBP1_HUMAN (Q8IUX7), AEBP1_MOUSE (Q640N1), AEBP1_RAT   (A2RUV9), 
CNT3B_HUMAN (Q96NU0), CNTP1_HUMAN (P78357), CNTP1_MOUSE (O54991), 
CNTP1_RAT   (P97846), CNTP2_HUMAN (Q9UHC6), CNTP2_MOUSE (Q9CPW0), 
CNTP2_PONAB (Q5RD64), CNTP3_HUMAN (Q9BZ76), CNTP4_HUMAN (Q9C0A0), 
CNTP4_MOUSE (Q99P47), CNTP5_CANFA (Q0V8T0), CNTP5_CHICK (Q0V8S9), 
CNTP5_HUMAN (Q8WYK1), CPXM2_HUMAN (Q8N436), CPXM2_MOUSE (Q9D2L5), 
CTP5B_MOUSE (Q0V8T8), CTP5B_RAT   (Q0V8T5), CTP5C_MOUSE (Q0V8T7), 
CTP5C_RAT   (Q0V8T4), CTP5D_RAT   (Q0V8T3), DDR1_HUMAN  (Q08345), 
DDR1_MOUSE  (Q03146), DDR1_PANTR  (Q7YR43), DDR1_RAT    (Q63474), 
DDR2_HUMAN  (Q16832), DDR2_MOUSE  (Q62371), EDIL3_HUMAN (O43854), 
EDIL3_MOUSE (O35474), EDIL3_PONAB (Q5R7K9), FA5V_OXYMI  (Q58L90), 
FA5V_OXYSU  (Q58L91), FA5V_PSETE  (Q7SZN0), FA5_BOVIN   (Q28107), 
FA5_HUMAN   (P12259), FA5_MOUSE   (O88783), FA5_PIG     (Q9GLP1), 
FA5_PSETE   (Q593B6), FA8_CANFA   (O18806), FA8_HUMAN   (P00451), 
FA8_MOUSE   (Q06194), FA8_PIG     (P12263), HMCT_BOMMO  (P98092), 
MFGM_BOVIN  (Q95114), MFGM_HUMAN  (Q08431), MFGM_MOUSE  (P21956), 
MFGM_PIG    (P79385), MFGM_RAT    (P70490), NRP1A_DANRE (Q8QFX6), 
NRP1_CHICK  (P79795), NRP1_HUMAN  (O14786), NRP1_MOUSE  (P97333), 
NRP1_RAT    (Q9QWJ9), NRP1_XENLA  (P28824), NRP2_HUMAN  (O60462), 
NRP2_MOUSE  (O35375), NRP2_RAT    (O35276), NRX4_DROME  (Q94887), 
SSPO_BOVIN  (P98167), SSPO_CHICK  (Q2PC93)
» More

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

AFTD_MYCS2  (A0QPD4), AFTD_MYCTU  (P96419), CADN_ACRMI  (B3EWZ3), 
CPXM1_HUMAN (Q96SM3), CPXM1_MOUSE (Q9Z100), CTP5A_MOUSE (Q0V8T9), 
CTP5A_RAT   (Q0V8T6), DCBD1_HUMAN (Q8N8Z6), DCBD2_HUMAN (Q96PD2), 
DCBD2_MOUSE (Q91ZV3), DCBD2_RAT   (Q91ZV2), DIS1A_DICDI (P02886), 
DIS1B_DICDI (P02887), DIS1D_DICDI (P02888), DIS2_DICDI  (P42530), 
HYBA2_BIFL2 (E8MGH9), SSPO_HUMAN  (A2VEC9), SSPO_MOUSE  (Q8CG65), 
SSPO_RAT    (Q700K0), XLRS1_HUMAN (O15537), XLRS1_MOUSE (Q9Z1L4), 
XLRS1_TAKRU (Q9W6R5)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

TECTA_HUMAN (O75443), TECTA_MOUSE (O08523)

		
PDB
[Detailed view]
36 PDB

1CZS; 1CZT; 1CZV; 1D7P; 1IQD; 1KEX; 1SDD; 2L9L; 2ORX; 2ORZ; 2PQS; 2QQI; 2QQJ; 2QQK; 2QQL; 2QQM; 2QQN; 2QQO; 2R7E; 2WUH; 2Z4F; 3BN6; 3CDZ; 3HNB; 3HNY; 3HOB; 3I97; 3J2Q; 3J2S; 4AG4; 4BDV; 4BXS; 4DEQ; 4GZ9; 4KI5; 4MO3
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission