Entry: PS01292

General information about the entry

Entry name [info] UPF0036
Accession [info] PS01292
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00994

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0036 signature.
Pattern [info]
H-x-S-G-H-[GA]-x(3)-[DE]-x(3)-[LM]-x(5)-P-x(3)-[LIVM]-P-x-H-G-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 21
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 53.33 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
24 sequences

RNJ1_BACSU  (Q45493), RNJ1_STAA3  (Q2FHZ1), RNJ1_STAA8  (Q2FZG9), 
RNJ1_STAAB  (Q2YX35), RNJ1_STAAC  (Q5HGZ5), RNJ1_STAAM  (Q99V09), 
RNJ1_STAAN  (Q7A682), RNJ1_STAAR  (Q6GHZ6), RNJ1_STAAS  (Q6GAC5), 
RNJ1_STAAW  (Q7A171), RNJ1_STAEQ  (Q5HQ80), RNJ1_STAES  (Q8CT16), 
RNJ1_STAHJ  (Q4L5A3), RNJ1_STAS1  (Q49WL3), RNJ1_STRP3  (Q8K5W8), 
RNJ_CORGL   (P54122), RNJ_HELP8   (B9XZG7), RNJ_HELPJ   (Q9ZJI6), 
RNJ_HELPY   (P56185), RNJ_METJA   (Q58271), RNJ_MYCGE   (P47385), 
RNJ_MYCPN   (P75497), RNJ_PYRAB   (Q9V076), RNJ_SYNY3   (P54123)
» More

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

RNJ2_BACSU  (O31760), RNJ2_STAA3  (Q2FHG3), RNJ2_STAA8  (Q2FZ19), 
RNJ2_STAAB  (Q2YXP1), RNJ2_STAAC  (Q5HGF6), RNJ2_STAAM  (Q99UJ7), 
RNJ2_STAAN  (Q7A5X6), RNJ2_STAAR  (Q6GHG0), RNJ2_STAAS  (Q6G9T8), 
RNJ2_STAAW  (Q7A115), RNJ2_STAEQ  (Q5HPR6), RNJ2_STAES  (Q8CST0), 
RNJ2_STAHJ  (Q4L5X8), RNJ2_STAS1  (Q49X63), RNJ2_STRP3  (Q8K7S6), 
RNJ_HALSA   (Q9HQI4), RNJ_MYCS2   (A0QVT2), RNJ_MYCTO   (P9WGZ8), 
RNJ_MYCTU   (P9WGZ9), RNJ_SINM2   (M4MR97), RNJ_THET2   (Q72JJ7)
» More

PDB
[Detailed view]
1 PDB

3ZQ4

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