Entry: PS01292

General information about the entry

Entry name [info] UPF0036
Accession [info] PS01292
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); NOV-1997 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00994

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0036 signature.
Pattern [info]
H-x-S-G-H-[GA]-x(3)-[DE]-x(3)-[LM]-x(5)-P-x(3)-[LIVM]-P-x-H-G-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 21
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 53.33 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
24 sequences

RNJ1_BACSU  (Q45493    ), RNJ1_STAA3  (Q2FHZ1    ), RNJ1_STAA8  (Q2FZG9    ), 
RNJ1_STAAB  (Q2YX35    ), RNJ1_STAAC  (Q5HGZ5    ), RNJ1_STAAM  (Q99V09    ), 
RNJ1_STAAN  (Q7A682    ), RNJ1_STAAR  (Q6GHZ6    ), RNJ1_STAAS  (Q6GAC5    ), 
RNJ1_STAAW  (Q7A171    ), RNJ1_STAEQ  (Q5HQ80    ), RNJ1_STAES  (Q8CT16    ), 
RNJ1_STAHJ  (Q4L5A3    ), RNJ1_STAS1  (Q49WL3    ), RNJ1_STRP3  (Q8K5W8    ), 
RNJ_CORGL   (P54122    ), RNJ_HELP8   (B9XZG7    ), RNJ_HELPJ   (Q9ZJI6    ), 
RNJ_HELPY   (P56185    ), RNJ_METJA   (Q58271    ), RNJ_MYCGE   (P47385    ), 
RNJ_MYCPN   (P75497    ), RNJ_PYRAB   (Q9V076    ), RNJ_SYNY3   (P54123    )
» more

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

RNJ2_BACSU  (O31760    ), RNJ2_STAA3  (Q2FHG3    ), RNJ2_STAA8  (Q2FZ19    ), 
RNJ2_STAAB  (Q2YXP1    ), RNJ2_STAAC  (Q5HGF6    ), RNJ2_STAAM  (Q99UJ7    ), 
RNJ2_STAAN  (Q7A5X6    ), RNJ2_STAAR  (Q6GHG0    ), RNJ2_STAAS  (Q6G9T8    ), 
RNJ2_STAAW  (Q7A115    ), RNJ2_STAEQ  (Q5HPR6    ), RNJ2_STAES  (Q8CST0    ), 
RNJ2_STAHJ  (Q4L5X8    ), RNJ2_STAS1  (Q49X63    ), RNJ2_STRP3  (Q8K7S6    ), 
RNJ_HALSA   (Q9HQI4    ), RNJ_MYCS2   (A0QVT2    ), RNJ_MYCTO   (P9WGZ8    ), 
RNJ_MYCTU   (P9WGZ9    ), RNJ_SINM2   (M4MR97    ), RNJ_THET2   (Q72JJ7    )
» more

PDB
[Detailed view]
1 PDB

3ZQ4

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