Entry: PS01303

General information about the entry
Entry name BCCT
Accession number PS01303
Entry type PATTERN
Date JUL-1998 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC01007
Name and characterization of the entry
DescriptionBCCT family of transporters signature.
Pattern [GSDNA]-W-T-[LIVM]-x-[FY]-W-x-W-W.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 52 hits in 52 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 52 hits in 52 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 98.11 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BETL_LISMN  (Q9X4A5), BETP_CORGL  (P54582), BETT_ECO57  (P0ABD0), 
BETT_ECOLI  (P0ABC9), CAIT_CITK8  (A8ALR3), CAIT_ECO24  (A7ZHD1), 
CAIT_ECO27  (B7UI86), CAIT_ECO45  (B7MAG3), CAIT_ECO55  (B7L4G3), 
CAIT_ECO57  (Q8XA30), CAIT_ECO5E  (B5YYD4), CAIT_ECO7I  (B7NHE4), 
CAIT_ECO81  (B7MNP7), CAIT_ECO8A  (B7M0D7), CAIT_ECOBW  (C4ZPW6), 
CAIT_ECODH  (B1XBG5), CAIT_ECOHS  (A7ZVZ0), CAIT_ECOK1  (A1A790), 
CAIT_ECOL5  (Q0TLU9), CAIT_ECOL6  (P59333), CAIT_ECOLC  (B1IRD6), 
CAIT_ECOLI  (P31553), CAIT_ECOLU  (B7N7R5), CAIT_ECOSE  (B6HYZ1), 
CAIT_ECOSM  (B1LFX3), CAIT_ECOUT  (Q1RGF8), CAIT_ESCF3  (B7LWN1), 
CAIT_PROSL  (P59334), CAIT_SALA4  (B5F753), CAIT_SALAR  (A9MQH4), 
CAIT_SALCH  (Q57TI7), CAIT_SALDC  (B5FHG8), CAIT_SALEP  (B5R1R3), 
CAIT_SALG2  (B5RGA7), CAIT_SALHS  (B4TIH3), CAIT_SALNS  (B4T6J9), 
CAIT_SALPA  (Q5PIN5), CAIT_SALPB  (A9MYK0), CAIT_SALPC  (C0Q4L6), 
CAIT_SALPK  (B5BL58), CAIT_SALSV  (B4TWR7), CAIT_SALTI  (Q8Z9L1), 
CAIT_SALTY  (Q8ZRX1), CAIT_SHIF8  (Q0T8F4), CAIT_SHIFL  (P59335), 
CAIT_SHISS  (Q3Z5W8), OPUD_BACSU  (P54417), Y1706_HAEIN (P45335), 
Y917_MYCTU  (P63695), Y941_MYCBO  (P63696), YEAV_ECO57  (P0ABD2), 
YEAV_ECOLI  (P0ABD1)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
CAIT_SHIDS  (Q32K57)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 2WIT; 2WSX; 3HFX; 3P03; 4AIN; 4DOJ;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or