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Entry: PS01315

General information about the entry

Entry name [info] CDS
Accession [info] PS01315
Entry type [info] PATTERN
Date [info] JUL-1998 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC01019

Name and characterization of the entry

Description [info] Phosphatidate cytidylyltransferase signature.
Pattern [info]
S-x-[LIVMF]-K-R-x(4)-K-D-x-[GSA]-x(2)-[LIF]-[PGS]-x-H-G-G-[LIVMF]-x-D-R-
[LIVMFT]-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 55 in 55 different sequences
Number of true positive hits 55 in 55 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.83 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
55 sequences

CDS1_ARATH  (O04928    ), CDS1_ENCCU  (Q95ZE3    ), CDS1_HUMAN  (Q92903    ), 
CDS1_MOUSE  (P98191    ), CDS1_RAT    (O35052    ), CDS1_SOLTU  (O04940    ), 
CDS1_YEAST  (P38221    ), CDS2_ARATH  (O49639    ), CDS2_BOVIN  (A0JNC1    ), 
CDS2_HUMAN  (O95674    ), CDS2_MOUSE  (Q99L43    ), CDS2_RAT    (Q91XU8    ), 
CDS3_ARATH  (Q1PE48    ), CDS4_ARATH  (Q94A03    ), CDS5_ARATH  (Q9M001    ), 
CDSA_AQUAE  (O67292    ), CDSA_BACSU  (O31752    ), CDSA_BRUA2  (Q2YRP9    ), 
CDSA_BRUAB  (P0C102    ), CDSA_BRUME  (Q8YHH2    ), CDSA_BRUSU  (Q8G0E0    ), 
CDSA_CAEEL  (P53439    ), CDSA_DROME  (P56079    ), CDSA_ECO57  (P0ABG2    ), 
CDSA_ECOLI  (P0ABG1    ), CDSA_HAEIN  (P44937    ), CDSA_HELPJ  (Q9ZML7    ), 
CDSA_HELPY  (O25004    ), CDSA_MYCBO  (P63759    ), CDSA_MYCGE  (Q49433    ), 
CDSA_MYCLE  (Q9CBU1    ), CDSA_MYCPN  (P75160    ), CDSA_MYCTO  (P9WPF6    ), 
CDSA_MYCTU  (P9WPF7    ), CDSA_PSEAE  (Q59640    ), CDSA_RICBR  (Q1RII7    ), 
CDSA_RICCN  (Q92I31    ), CDSA_RICFE  (Q4ULR7    ), CDSA_RICPR  (Q9ZDA8    ), 
CDSA_RICTY  (Q68WV5    ), CDSA_SHIFL  (P0ABG3    ), CDSA_STAAC  (Q5HGH0    ), 
CDSA_STAAM  (Q99UL1    ), CDSA_STAAN  (Q7A5Y4    ), CDSA_STAAR  (Q6GHH4    ), 
CDSA_STAAS  (Q6G9V2    ), CDSA_STAAW  (Q7A121    ), CDSA_STAEQ  (Q5HPT0    ), 
CDSA_STAES  (Q8CST9    ), CDSA_STAHJ  (Q4L5W3    ), CDSA_STAS1  (Q49X46    ), 
CDSA_SYNY3  (P73548    ), CDSA_THEMA  (Q9X1B7    ), CDSH_SCHPO  (Q9P381    ), 
YNBB_ECOLI  (P76091    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CDSA_CHLMU  (Q9PJU1    ), CDSA_CHLPN  (Q9Z7Y6    ), CDSA_CHLTR  (O84457    )

		
PDB
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1 PDB

4Q2G

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