Entry: PS01344

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General information about the entry

Entry name [info] FRATAXIN_1
Accession [info] PS01344
Entry type [info] PATTERN
Date [info] DEC-2001 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC01043

Name and characterization of the entry

Description [info] Frataxin family signature.
Pattern [info]
[IV]-[LIVF]-[NS]-[KRTAVSL]-[QH]-x-[PAVS]-x(2)-[EQ]-[LIVM]-W-x-[STA]-
[STAD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 195 in 195 different sequences
Number of true positive hits 195 in 195 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.48 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
195 sequences

CYAY_ACIAC  (A1TKV4), CYAY_ACIET  (B9MDE4), CYAY_ACISJ  (A1W3Z7), 
CYAY_ACTP2  (A3N1C3), CYAY_ACTP7  (B3GY04), CYAY_ACTPJ  (B0BQ57), 
CYAY_ACTSZ  (A6VL77), CYAY_AERHH  (A0KFH9), CYAY_AERS4  (A4SRW7), 
CYAY_ALBFT  (Q21UC5), CYAY_ALISL  (B6EP83), CYAY_AZOVD  (C1DJ52), 
CYAY_BORA1  (Q2L201), CYAY_BORBR  (Q7WR87), CYAY_BORPA  (Q7W2B9), 
CYAY_BORPD  (A9IHP8), CYAY_BORPE  (Q7VT96), CYAY_BUCA5  (B8D8F2), 
CYAY_BUCAI  (P57650), CYAY_BUCAP  (Q8K900), CYAY_BUCAT  (B8D8A9), 
CYAY_BUCBP  (P59463), CYAY_BURA4  (B1YRR7), CYAY_BURCA  (Q1BRY6), 
CYAY_BURCC  (B1JU60), CYAY_BURCH  (A0K3R3), CYAY_BURCJ  (B4E5Z6), 
CYAY_BURCM  (Q0BJ08), CYAY_BURM1  (A9ADN1), CYAY_BURM7  (A3MRS9), 
CYAY_BURM9  (A2S7F1), CYAY_BURMA  (Q62GA2), CYAY_BURMS  (A1V8C9), 
CYAY_BURP0  (A3P073), CYAY_BURP1  (Q3JMV4), CYAY_BURP6  (A3NED9), 
CYAY_BURP8  (B2JI26), CYAY_BURPP  (B2T711), CYAY_BURPS  (Q63Q50), 
CYAY_BURS3  (Q39KC9), CYAY_BURTA  (Q2SU65), CYAY_BURVG  (A4JAS8), 
CYAY_BURXL  (Q13TK9), CYAY_CHRVO  (Q7P221), CYAY_CITK8  (A8ACV5), 
CYAY_COLP3  (Q48AW7), CYAY_CROS8  (A7MQK4), CYAY_CUPNH  (Q0K661), 
CYAY_CUPPJ  (Q46WI6), CYAY_CUPTR  (B3R7C6), CYAY_DICCH  (P40128), 
CYAY_ECO24  (A7ZU09), CYAY_ECO27  (B7UNC2), CYAY_ECO45  (B7MH68), 
CYAY_ECO55  (B7L963), CYAY_ECO57  (Q8XAP0), CYAY_ECO5E  (B5YY53), 
CYAY_ECO7I  (B7NTD8), CYAY_ECO81  (B7N297), CYAY_ECO8A  (B7M605), 
CYAY_ECOBW  (C4ZZ71), CYAY_ECODH  (B1XAH3), CYAY_ECOHS  (A8A6R1), 
CYAY_ECOK1  (A1AHX3), CYAY_ECOL5  (Q0TAR9), CYAY_ECOL6  (Q8FBN9), 
CYAY_ECOLC  (B1IW97), CYAY_ECOLI  (P27838), CYAY_ECOLU  (B7NFA9), 
CYAY_ECOSE  (B6I4E2), CYAY_ECOSM  (B1LLX7), CYAY_ECOUT  (Q1R4D1), 
CYAY_EDWI9  (C5BBD2), CYAY_ENT38  (A4WG10), CYAY_ESCF3  (B7LU51), 
CYAY_HAEI8  (Q4QMG7), CYAY_HAEIE  (A5UDZ6), CYAY_HAEIG  (A5UHN1), 
CYAY_HAEIN  (P71358), CYAY_HERAR  (A4G9P9), CYAY_HISS1  (Q0I5V7), 
CYAY_HISS2  (B0UWH8), CYAY_JANMA  (A6T3G3), CYAY_KLEP3  (B5XYK9), 
CYAY_KLEP7  (A6TGJ0), CYAY_MANSM  (Q65QS1), CYAY_NEIG1  (Q5F536), 
CYAY_NEIG2  (B4RRA8), CYAY_NEIM0  (A9M0Q0), CYAY_NEIMA  (P56993), 
CYAY_NEIMB  (P56977), CYAY_NEIMF  (A1KW58), CYAY_PASMU  (P57943), 
CYAY_PECAS  (Q6CZG6), CYAY_PECCP  (C6DHB9), CYAY_PHOLL  (Q7MYN3), 
CYAY_PHOPR  (Q6LLN3), CYAY_POLSJ  (Q12FF7), CYAY_PSEA6  (Q15Z11), 
CYAY_PSEA7  (A6VE49), CYAY_PSEAE  (Q9HTS5), CYAY_PSEE4  (Q1I306), 
CYAY_PSEF5  (Q4K3W5), CYAY_PSEFS  (C3K433), CYAY_PSEHT  (Q3IEW0), 
CYAY_PSEMY  (A4XNX7), CYAY_PSEP1  (A5WAU2), CYAY_PSEPF  (Q3K4S1), 
CYAY_PSEPG  (B0KQ38), CYAY_PSEPK  (Q88CF6), CYAY_PSEPW  (B1J1U3), 
CYAY_PSESM  (Q88B06), CYAY_PSEU2  (Q500B9), CYAY_PSEU5  (A4VGW8), 
CYAY_PSYIN  (A1SR01), CYAY_RALME  (Q1LI79), CYAY_RALPJ  (B2UEH7), 
CYAY_RALSO  (Q8XV54), CYAY_RICAE  (C3PN35), CYAY_RICAH  (A8GN05), 
CYAY_RICBR  (Q1RIC4), CYAY_RICCN  (Q92IH7), CYAY_RICFE  (Q4UM50), 
CYAY_RICPR  (Q9ZDK5), CYAY_RICPU  (C4K1X9), CYAY_RICRO  (B0BX32), 
CYAY_RICRS  (A8GRM5), CYAY_RICTY  (Q68X49), CYAY_SALA4  (B5EZ64), 
CYAY_SALAR  (A9MJ08), CYAY_SALCH  (Q57HR5), CYAY_SALDC  (B5FNU2), 
CYAY_SALEP  (B5QVJ3), CYAY_SALG2  (B5RFQ2), CYAY_SALHS  (B4TB34), 
CYAY_SALNS  (B4SZ48), CYAY_SALPA  (Q5PKM9), CYAY_SALPB  (A9MY64), 
CYAY_SALPC  (C0Q3B5), CYAY_SALPK  (B5BIV3), CYAY_SALSV  (B4TNV5), 
CYAY_SALTI  (Q8Z3A4), CYAY_SALTY  (P56978), CYAY_SERP5  (A8G850), 
CYAY_SHEB5  (A3D9Q3), CYAY_SHEB8  (A6WTF8), CYAY_SHEB9  (A9L5F8), 
CYAY_SHEON  (Q8E9H2), CYAY_SHEPC  (A4YBG0), CYAY_SHESA  (A0KS62), 
CYAY_SHESM  (Q0HN97), CYAY_SHESR  (Q0HQI9), CYAY_SHESW  (A1RPD5), 
CYAY_SHIB3  (B2TUW2), CYAY_SHIBS  (Q31UI1), CYAY_SHIDS  (Q329Y2), 
CYAY_SHIF8  (Q0SYZ5), CYAY_SHIFL  (Q83IX2), CYAY_SHISS  (Q3YVG0), 
CYAY_THISH  (B8GQ85), CYAY_TOLAT  (C4LDV0), CYAY_VARPS  (C5CQG3), 
CYAY_VEREI  (A1WDW0), CYAY_VIBC3  (A5F4I9), CYAY_VIBCB  (A7N0W3), 
CYAY_VIBCH  (Q9KVL8), CYAY_VIBCM  (C3LPW5), CYAY_VIBF1  (Q5E1W5), 
CYAY_VIBFM  (B5FCR3), CYAY_VIBPA  (Q87KJ1), CYAY_VIBSL  (B7VMD7), 
CYAY_VIBVU  (Q8DD83), CYAY_VIBVY  (Q7MQC4), CYAY_YERE8  (A1JI88), 
CYAY_YERIN  (P30534), CYAY_YERP3  (A7FD72), CYAY_YERPA  (Q1CBM8), 
CYAY_YERPB  (B2K070), CYAY_YERPE  (P46356), CYAY_YERPG  (A9R8K3), 
CYAY_YERPN  (Q1CNI0), CYAY_YERPP  (A4TRA5), CYAY_YERPS  (Q66FZ7), 
CYAY_YERPY  (B1JPE3), FRDA_ARATH  (Q9ZR07), FRDA_BOVIN  (Q05B87), 
FRDA_CAEEL  (Q9TY03), FRDA_DICDI  (Q54C45), FRDA_DROME  (Q9W385), 
FRDA_HUMAN  (Q16595), FRDA_MACFA  (Q8HXX9), FRDA_MOUSE  (O35943), 
FRDA_SCHPO  (O74831), FRDA_TRAHO  (B0YLW8), FRDA_YEAST  (Q07540)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CYAY_CHLT3  (B3QSI5), CYAY_DECAR  (Q47JL4), CYAY_DELAS  (A9BXD6)

		
PDB
[Detailed view]
15 PDB

1EKG; 1EW4; 1LY7; 1SOY; 2EFF; 2FQL; 2GA5; 2P1X; 3OEQ; 3OER; 3S4M; 3T3X; 4EC2; 4HS5; 4JPD
» More

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