Entry: PS01344

General information about the entry

Entry name [info] FRATAXIN_1
Accession [info] PS01344
Entry type [info] PATTERN
Date [info] DEC-2001 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC01043

Name and characterization of the entry

Description [info] Frataxin family signature.
Pattern [info]
[IV]-[LIVF]-[NS]-[KRTAVSL]-[QH]-x-[PAVS]-x(2)-[EQ]-[LIVM]-W-x-[STA]-
[STAD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 195 in 195 different sequences
Number of true positive hits 195 in 195 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.48 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
195 sequences

CYAY_ACIAC  (A1TKV4), CYAY_ACIET  (B9MDE4), CYAY_ACISJ  (A1W3Z7), 
CYAY_ACTP2  (A3N1C3), CYAY_ACTP7  (B3GY04), CYAY_ACTPJ  (B0BQ57), 
CYAY_ACTSZ  (A6VL77), CYAY_AERHH  (A0KFH9), CYAY_AERS4  (A4SRW7), 
CYAY_ALISL  (B6EP83), CYAY_AZOVD  (C1DJ52), CYAY_BORA1  (Q2L201), 
CYAY_BORBR  (Q7WR87), CYAY_BORPA  (Q7W2B9), CYAY_BORPD  (A9IHP8), 
CYAY_BORPE  (Q7VT96), CYAY_BUCA5  (B8D8F2), CYAY_BUCAI  (P57650), 
CYAY_BUCAP  (Q8K900), CYAY_BUCAT  (B8D8A9), CYAY_BUCBP  (P59463), 
CYAY_BURA4  (B1YRR7), CYAY_BURCA  (Q1BRY6), CYAY_BURCC  (B1JU60), 
CYAY_BURCH  (A0K3R3), CYAY_BURCJ  (B4E5Z6), CYAY_BURCM  (Q0BJ08), 
CYAY_BURL3  (Q39KC9), CYAY_BURM1  (A9ADN1), CYAY_BURM7  (A3MRS9), 
CYAY_BURM9  (A2S7F1), CYAY_BURMA  (Q62GA2), CYAY_BURMS  (A1V8C9), 
CYAY_BURP0  (A3P073), CYAY_BURP1  (Q3JMV4), CYAY_BURP6  (A3NED9), 
CYAY_BURP8  (B2JI26), CYAY_BURPP  (B2T711), CYAY_BURPS  (Q63Q50), 
CYAY_BURTA  (Q2SU65), CYAY_BURVG  (A4JAS8), CYAY_BURXL  (Q13TK9), 
CYAY_CHRVO  (Q7P221), CYAY_CITK8  (A8ACV5), CYAY_COLP3  (Q48AW7), 
CYAY_CROS8  (A7MQK4), CYAY_CUPNH  (Q0K661), CYAY_CUPPJ  (Q46WI6), 
CYAY_CUPTR  (B3R7C6), CYAY_DICCH  (P40128), CYAY_ECO24  (A7ZU09), 
CYAY_ECO27  (B7UNC2), CYAY_ECO45  (B7MH68), CYAY_ECO55  (B7L963), 
CYAY_ECO57  (Q8XAP0), CYAY_ECO5E  (B5YY53), CYAY_ECO7I  (B7NTD8), 
CYAY_ECO81  (B7N297), CYAY_ECO8A  (B7M605), CYAY_ECOBW  (C4ZZ71), 
CYAY_ECODH  (B1XAH3), CYAY_ECOHS  (A8A6R1), CYAY_ECOK1  (A1AHX3), 
CYAY_ECOL5  (Q0TAR9), CYAY_ECOL6  (Q8FBN9), CYAY_ECOLC  (B1IW97), 
CYAY_ECOLI  (P27838), CYAY_ECOLU  (B7NFA9), CYAY_ECOSE  (B6I4E2), 
CYAY_ECOSM  (B1LLX7), CYAY_ECOUT  (Q1R4D1), CYAY_EDWI9  (C5BBD2), 
CYAY_ENT38  (A4WG10), CYAY_ESCF3  (B7LU51), CYAY_HAEI8  (Q4QMG7), 
CYAY_HAEIE  (A5UDZ6), CYAY_HAEIG  (A5UHN1), CYAY_HAEIN  (P71358), 
CYAY_HAES1  (Q0I5V7), CYAY_HERAR  (A4G9P9), CYAY_HISS2  (B0UWH8), 
CYAY_JANMA  (A6T3G3), CYAY_KLEP3  (B5XYK9), CYAY_KLEP7  (A6TGJ0), 
CYAY_MANSM  (Q65QS1), CYAY_NEIG1  (Q5F536), CYAY_NEIG2  (B4RRA8), 
CYAY_NEIM0  (A9M0Q0), CYAY_NEIMA  (P56993), CYAY_NEIMB  (P56977), 
CYAY_NEIMF  (A1KW58), CYAY_PASMU  (P57943), CYAY_PECAS  (Q6CZG6), 
CYAY_PECCP  (C6DHB9), CYAY_PHOLL  (Q7MYN3), CYAY_PHOPR  (Q6LLN3), 
CYAY_POLSJ  (Q12FF7), CYAY_PSEA6  (Q15Z11), CYAY_PSEA7  (A6VE49), 
CYAY_PSEAE  (Q9HTS5), CYAY_PSEE4  (Q1I306), CYAY_PSEF5  (Q4K3W5), 
CYAY_PSEFS  (C3K433), CYAY_PSEHT  (Q3IEW0), CYAY_PSEMY  (A4XNX7), 
CYAY_PSEP1  (A5WAU2), CYAY_PSEPF  (Q3K4S1), CYAY_PSEPG  (B0KQ38), 
CYAY_PSEPK  (Q88CF6), CYAY_PSEPW  (B1J1U3), CYAY_PSESM  (Q88B06), 
CYAY_PSEU2  (Q500B9), CYAY_PSEU5  (A4VGW8), CYAY_PSYIN  (A1SR01), 
CYAY_RALME  (Q1LI79), CYAY_RALPJ  (B2UEH7), CYAY_RALSO  (Q8XV54), 
CYAY_RHOFT  (Q21UC5), CYAY_RICAE  (C3PN35), CYAY_RICAH  (A8GN05), 
CYAY_RICBR  (Q1RIC4), CYAY_RICCN  (Q92IH7), CYAY_RICFE  (Q4UM50), 
CYAY_RICPR  (Q9ZDK5), CYAY_RICPU  (C4K1X9), CYAY_RICRO  (B0BX32), 
CYAY_RICRS  (A8GRM5), CYAY_RICTY  (Q68X49), CYAY_SALA4  (B5EZ64), 
CYAY_SALAR  (A9MJ08), CYAY_SALCH  (Q57HR5), CYAY_SALDC  (B5FNU2), 
CYAY_SALEP  (B5QVJ3), CYAY_SALG2  (B5RFQ2), CYAY_SALHS  (B4TB34), 
CYAY_SALNS  (B4SZ48), CYAY_SALPA  (Q5PKM9), CYAY_SALPB  (A9MY64), 
CYAY_SALPC  (C0Q3B5), CYAY_SALPK  (B5BIV3), CYAY_SALSV  (B4TNV5), 
CYAY_SALTI  (Q8Z3A4), CYAY_SALTY  (P56978), CYAY_SERP5  (A8G850), 
CYAY_SHEB5  (A3D9Q3), CYAY_SHEB8  (A6WTF8), CYAY_SHEB9  (A9L5F8), 
CYAY_SHEON  (Q8E9H2), CYAY_SHEPC  (A4YBG0), CYAY_SHESA  (A0KS62), 
CYAY_SHESM  (Q0HN97), CYAY_SHESR  (Q0HQI9), CYAY_SHESW  (A1RPD5), 
CYAY_SHIB3  (B2TUW2), CYAY_SHIBS  (Q31UI1), CYAY_SHIDS  (Q329Y2), 
CYAY_SHIF8  (Q0SYZ5), CYAY_SHIFL  (Q83IX2), CYAY_SHISS  (Q3YVG0), 
CYAY_THISH  (B8GQ85), CYAY_TOLAT  (C4LDV0), CYAY_VARPS  (C5CQG3), 
CYAY_VEREI  (A1WDW0), CYAY_VIBC3  (A5F4I9), CYAY_VIBCB  (A7N0W3), 
CYAY_VIBCH  (Q9KVL8), CYAY_VIBCM  (C3LPW5), CYAY_VIBF1  (Q5E1W5), 
CYAY_VIBFM  (B5FCR3), CYAY_VIBPA  (Q87KJ1), CYAY_VIBTL  (B7VMD7), 
CYAY_VIBVU  (Q8DD83), CYAY_VIBVY  (Q7MQC4), CYAY_YERE8  (A1JI88), 
CYAY_YERIN  (P30534), CYAY_YERP3  (A7FD72), CYAY_YERPA  (Q1CBM8), 
CYAY_YERPB  (B2K070), CYAY_YERPE  (P46356), CYAY_YERPG  (A9R8K3), 
CYAY_YERPN  (Q1CNI0), CYAY_YERPP  (A4TRA5), CYAY_YERPS  (Q66FZ7), 
CYAY_YERPY  (B1JPE3), FRDA_ARATH  (Q9ZR07), FRDA_BOVIN  (Q05B87), 
FRDA_CAEEL  (Q9TY03), FRDA_DICDI  (Q54C45), FRDA_DROME  (Q9W385), 
FRDA_HUMAN  (Q16595), FRDA_MACFA  (Q8HXX9), FRDA_MOUSE  (O35943), 
FRDA_SCHPO  (O74831), FRDA_TRAHO  (B0YLW8), FRDA_YEAST  (Q07540)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CYAY_CHLT3  (B3QSI5), CYAY_DECAR  (Q47JL4), CYAY_DELAS  (A9BXD6)

		
PDB
[Detailed view]
17 PDB

1EKG; 1EW4; 1LY7; 1SOY; 2EFF; 2FQL; 2GA5; 2P1X; 3OEQ; 3OER; 3S4M; 3T3X; 4EC2; 4HS5; 4JPD; 4LK8; 4LP1
» More

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