Entry: PS01344

General information about the entry

Entry name [info] FRATAXIN_1
Accession [info] PS01344
Entry type [info] PATTERN
Date [info] DEC-2001 (CREATED); APR-2006 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC01043

Name and characterization of the entry

Description [info] Frataxin family signature.
Pattern [info]
[IV]-[LIVF]-[NS]-[KRTAVSL]-[QH]-x-[PAVS]-x(2)-[EQ]-[LIVM]-W-x-[STA]-
[STAD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 195 in 195 different sequences
Number of true positive hits 195 in 195 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.48 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
195 sequences

CYAY_ACIAC  (A1TKV4    ), CYAY_ACIET  (B9MDE4    ), CYAY_ACISJ  (A1W3Z7    ), 
CYAY_ACTP2  (A3N1C3    ), CYAY_ACTP7  (B3GY04    ), CYAY_ACTPJ  (B0BQ57    ), 
CYAY_ACTSZ  (A6VL77    ), CYAY_AERHH  (A0KFH9    ), CYAY_AERS4  (A4SRW7    ), 
CYAY_ALISL  (B6EP83    ), CYAY_AZOVD  (C1DJ52    ), CYAY_BORA1  (Q2L201    ), 
CYAY_BORBR  (Q7WR87    ), CYAY_BORPA  (Q7W2B9    ), CYAY_BORPD  (A9IHP8    ), 
CYAY_BORPE  (Q7VT96    ), CYAY_BUCA5  (B8D8F2    ), CYAY_BUCAI  (P57650    ), 
CYAY_BUCAP  (Q8K900    ), CYAY_BUCAT  (B8D8A9    ), CYAY_BUCBP  (P59463    ), 
CYAY_BURA4  (B1YRR7    ), CYAY_BURCA  (Q1BRY6    ), CYAY_BURCC  (B1JU60    ), 
CYAY_BURCH  (A0K3R3    ), CYAY_BURCJ  (B4E5Z6    ), CYAY_BURCM  (Q0BJ08    ), 
CYAY_BURL3  (Q39KC9    ), CYAY_BURM1  (A9ADN1    ), CYAY_BURM7  (A3MRS9    ), 
CYAY_BURM9  (A2S7F1    ), CYAY_BURMA  (Q62GA2    ), CYAY_BURMS  (A1V8C9    ), 
CYAY_BURP0  (A3P073    ), CYAY_BURP1  (Q3JMV4    ), CYAY_BURP6  (A3NED9    ), 
CYAY_BURPS  (Q63Q50    ), CYAY_BURTA  (Q2SU65    ), CYAY_BURVG  (A4JAS8    ), 
CYAY_BURXL  (Q13TK9    ), CYAY_CHRVO  (Q7P221    ), CYAY_CITK8  (A8ACV5    ), 
CYAY_COLP3  (Q48AW7    ), CYAY_CROS8  (A7MQK4    ), CYAY_CUPMC  (Q1LI79    ), 
CYAY_CUPNH  (Q0K661    ), CYAY_CUPPJ  (Q46WI6    ), CYAY_CUPTR  (B3R7C6    ), 
CYAY_DICCH  (P40128    ), CYAY_ECO24  (A7ZU09    ), CYAY_ECO27  (B7UNC2    ), 
CYAY_ECO45  (B7MH68    ), CYAY_ECO55  (B7L963    ), CYAY_ECO57  (Q8XAP0    ), 
CYAY_ECO5E  (B5YY53    ), CYAY_ECO7I  (B7NTD8    ), CYAY_ECO81  (B7N297    ), 
CYAY_ECO8A  (B7M605    ), CYAY_ECOBW  (C4ZZ71    ), CYAY_ECODH  (B1XAH3    ), 
CYAY_ECOHS  (A8A6R1    ), CYAY_ECOK1  (A1AHX3    ), CYAY_ECOL5  (Q0TAR9    ), 
CYAY_ECOL6  (Q8FBN9    ), CYAY_ECOLC  (B1IW97    ), CYAY_ECOLI  (P27838    ), 
CYAY_ECOLU  (B7NFA9    ), CYAY_ECOSE  (B6I4E2    ), CYAY_ECOSM  (B1LLX7    ), 
CYAY_ECOUT  (Q1R4D1    ), CYAY_EDWI9  (C5BBD2    ), CYAY_ENT38  (A4WG10    ), 
CYAY_ESCF3  (B7LU51    ), CYAY_HAEI8  (Q4QMG7    ), CYAY_HAEIE  (A5UDZ6    ), 
CYAY_HAEIG  (A5UHN1    ), CYAY_HAEIN  (P71358    ), CYAY_HAES1  (Q0I5V7    ), 
CYAY_HERAR  (A4G9P9    ), CYAY_HISS2  (B0UWH8    ), CYAY_JANMA  (A6T3G3    ), 
CYAY_KLEP3  (B5XYK9    ), CYAY_KLEP7  (A6TGJ0    ), CYAY_MANSM  (Q65QS1    ), 
CYAY_NEIG1  (Q5F536    ), CYAY_NEIG2  (B4RRA8    ), CYAY_NEIM0  (A9M0Q0    ), 
CYAY_NEIMA  (P56993    ), CYAY_NEIMB  (P56977    ), CYAY_NEIMF  (A1KW58    ), 
CYAY_PARP8  (B2JI26    ), CYAY_PARPJ  (B2T711    ), CYAY_PASMU  (P57943    ), 
CYAY_PECAS  (Q6CZG6    ), CYAY_PECCP  (C6DHB9    ), CYAY_PHOLL  (Q7MYN3    ), 
CYAY_PHOPR  (Q6LLN3    ), CYAY_POLSJ  (Q12FF7    ), CYAY_PSEA6  (Q15Z11    ), 
CYAY_PSEA7  (A6VE49    ), CYAY_PSEAE  (Q9HTS5    ), CYAY_PSEE4  (Q1I306    ), 
CYAY_PSEF5  (Q4K3W5    ), CYAY_PSEFS  (C3K433    ), CYAY_PSEHT  (Q3IEW0    ), 
CYAY_PSEMY  (A4XNX7    ), CYAY_PSEP1  (A5WAU2    ), CYAY_PSEPF  (Q3K4S1    ), 
CYAY_PSEPG  (B0KQ38    ), CYAY_PSEPK  (Q88CF6    ), CYAY_PSEPW  (B1J1U3    ), 
CYAY_PSESM  (Q88B06    ), CYAY_PSEU2  (Q500B9    ), CYAY_PSEU5  (A4VGW8    ), 
CYAY_PSYIN  (A1SR01    ), CYAY_RALPJ  (B2UEH7    ), CYAY_RALSO  (Q8XV54    ), 
CYAY_RHOFT  (Q21UC5    ), CYAY_RICAE  (C3PN35    ), CYAY_RICAH  (A8GN05    ), 
CYAY_RICBR  (Q1RIC4    ), CYAY_RICCN  (Q92IH7    ), CYAY_RICFE  (Q4UM50    ), 
CYAY_RICPR  (Q9ZDK5    ), CYAY_RICPU  (C4K1X9    ), CYAY_RICRO  (B0BX32    ), 
CYAY_RICRS  (A8GRM5    ), CYAY_RICTY  (Q68X49    ), CYAY_SALA4  (B5EZ64    ), 
CYAY_SALAR  (A9MJ08    ), CYAY_SALCH  (Q57HR5    ), CYAY_SALDC  (B5FNU2    ), 
CYAY_SALEP  (B5QVJ3    ), CYAY_SALG2  (B5RFQ2    ), CYAY_SALHS  (B4TB34    ), 
CYAY_SALNS  (B4SZ48    ), CYAY_SALPA  (Q5PKM9    ), CYAY_SALPB  (A9MY64    ), 
CYAY_SALPC  (C0Q3B5    ), CYAY_SALPK  (B5BIV3    ), CYAY_SALSV  (B4TNV5    ), 
CYAY_SALTI  (Q8Z3A4    ), CYAY_SALTY  (P56978    ), CYAY_SERP5  (A8G850    ), 
CYAY_SHEB5  (A3D9Q3    ), CYAY_SHEB8  (A6WTF8    ), CYAY_SHEB9  (A9L5F8    ), 
CYAY_SHEON  (Q8E9H2    ), CYAY_SHEPC  (A4YBG0    ), CYAY_SHESA  (A0KS62    ), 
CYAY_SHESM  (Q0HN97    ), CYAY_SHESR  (Q0HQI9    ), CYAY_SHESW  (A1RPD5    ), 
CYAY_SHIB3  (B2TUW2    ), CYAY_SHIBS  (Q31UI1    ), CYAY_SHIDS  (Q329Y2    ), 
CYAY_SHIF8  (Q0SYZ5    ), CYAY_SHIFL  (Q83IX2    ), CYAY_SHISS  (Q3YVG0    ), 
CYAY_THISH  (B8GQ85    ), CYAY_TOLAT  (C4LDV0    ), CYAY_VARPS  (C5CQG3    ), 
CYAY_VEREI  (A1WDW0    ), CYAY_VIBC3  (A5F4I9    ), CYAY_VIBCB  (A7N0W3    ), 
CYAY_VIBCH  (Q9KVL8    ), CYAY_VIBCM  (C3LPW5    ), CYAY_VIBF1  (Q5E1W5    ), 
CYAY_VIBFM  (B5FCR3    ), CYAY_VIBPA  (Q87KJ1    ), CYAY_VIBTL  (B7VMD7    ), 
CYAY_VIBVU  (Q8DD83    ), CYAY_VIBVY  (Q7MQC4    ), CYAY_YERE8  (A1JI88    ), 
CYAY_YERIN  (P30534    ), CYAY_YERP3  (A7FD72    ), CYAY_YERPA  (Q1CBM8    ), 
CYAY_YERPB  (B2K070    ), CYAY_YERPE  (P46356    ), CYAY_YERPG  (A9R8K3    ), 
CYAY_YERPN  (Q1CNI0    ), CYAY_YERPP  (A4TRA5    ), CYAY_YERPS  (Q66FZ7    ), 
CYAY_YERPY  (B1JPE3    ), FRDA_ARATH  (Q9ZR07    ), FRDA_BOVIN  (Q05B87    ), 
FRDA_CAEEL  (Q9TY03    ), FRDA_DICDI  (Q54C45    ), FRDA_DROME  (Q9W385    ), 
FRDA_HUMAN  (Q16595    ), FRDA_MACFA  (Q8HXX9    ), FRDA_MOUSE  (O35943    ), 
FRDA_SCHPO  (O74831    ), FRDA_TRAHO  (B0YLW8    ), FRDA_YEAST  (Q07540    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CYAY_CHLT3  (B3QSI5    ), CYAY_DECAR  (Q47JL4    ), CYAY_DELAS  (A9BXD6    )

		
PDB
[Detailed view]
19 PDB

1EKG; 1EW4; 1LY7; 1SOY; 2EFF; 2FQL; 2GA5; 2P1X; 3OEQ; 3OER; 3S4M; 3T3X; 4EC2; 4HS5; 4JPD; 4LK8; 4LP1; 5KZ5; 5T0V
» more

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