Entry: PS50023

General information about the entry

Entry name [info] LIM_DOMAIN_2
Accession [info] PS50023
Entry type [info] MATRIX
Date [info] 01-NOV-1997 CREATED; 01-OCT-2013 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00382
Associated ProRule [info] PRU00125

Name and characterization of the entry

Description [info] LIM domain profile.
Matrix / Profile [info] 
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=61;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=61;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.7028; R2=0.0099; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=586; N_SCORE=8.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=283; N_SCORE=5.5; MODE=1; TEXT='R?';
/DEFAULT: B0=-50; E0=-50; D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105;

...
 
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B0=0; B1=0; BI=-105; BD=-105;
/M: SY='P'; M= -6, -4,-26, -1,  3,-22,-13,-10,-17, -6,-19,-14, -4, 13, -3,-11, -1, -4,-17,-26,-16, -2;
/M: SY='R'; M= -9, -8,-24,-10, -4,-15,-17, -9,-12, 10,-11, -4, -4,-16, -2, 11, -7, -6, -8,-23, -9, -4;
/M: SY='C'; M=-10,-20,118,-30,-30,-20,-30,-30,-30,-29,-20,-20,-20,-40,-30,-29,-10,-10,-10,-50,-30,-30;
/M: SY='A'; M= 11, -6,-18, -9, -5,-18, -3, -6,-16, -8,-16,-11, -3, -8, -5,-11,  4, -3,-11,-23,-12, -6;
/M: SY='G'; M=  0, -8,-20,-10, -9,-20,  8,-11,-22, -1,-19,-11, -2,-18, -7,  3,  0, -7,-13,-23,-16, -9;
/M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='G'; M= -4,  6,-25,  4,  0,-26, 12, -2,-29, -1,-25,-16, 10,-15,  0, -2,  4, -7,-24,-28,-18,  0;
/M: SY='K'; M= -9, -1,-28,  0,  8,-24,-12, -3,-23, 15,-19, -9,  0,-13, 10, 12, -5, -8,-20,-22,-11,  8;
/M: SY='P'; M= -3,-13,-27,-13, -6,-16, -8,-12,-13, -8,-13, -8, -9,  6, -6,-10, -4, -5,-13,-22,-13, -8;
/M: SY='I'; M= -8,-29,-22,-36,-29,  4,-36,-28, 39,-27, 19, 17,-23,-24,-23,-26,-18, -7, 31,-21, -1,-29;
/M: SY='Y'; M= -5, -8,-21, -9, -6, -5,-17, -4, -9, -8, -8, -6, -6,-15, -5, -7, -1,  2, -8,-16,  6, -7;
/M: SY='D'; M= -3,  2,-28,  7,  2,-26,  5,-10,-27, -6,-24,-19,  0,  6, -6,-11,  1, -8,-23,-28,-21, -3;
/M: SY='R'; M=  0, -2,-22, -4,  0,-20, -8, -9,-18,  2,-16,-11,  1,-13,  0,  5,  3,  1,-13,-26,-14, -1;
/I:         MD=-21;
/M: SY='E'; M= -7,  3,-17,  7, 14,-10,-13, -1,-15, -1,-11,-10, -1, -7,  4, -4, -2, -6,-15,-15, -3,  9; D=-3;
/I:         I=-5; MI=0; IM=0; DM=-21;
/M: SY='V'; M= -8,-20,-15,-22,-15, -1,-25,-15,  5,-10,  2,  3,-18,-22,-13, -8,-13, -7,  8,-16,  2,-15;
/M: SY='V'; M= -8,-23,-17,-26,-19,  2,-27,-16, 14,-14, 14, 14,-22,-24,-15, -8,-17, -6, 15,-20,  0,-18;
/M: SY='R'; M= -8, -5,-22, -8, -2,-17,-19, -8,-11,  5,-10, -5, -1,-16,  2, 11, -2,  1, -7,-26,-11, -1;
/M: SY='A'; M= 26,-11, -4,-18,-12,-15, -6,-18, -9,-11, -9, -7,-10,-15,-12,-17,  6,  0,  0,-24,-16,-11;
/M: SY='L'; M= -8, -9,-23,-10, -7,-10,-15,-11, -6, -7,  3,  2, -8,-17, -6, -3,-11, -6, -7,-23, -8, -8;
/M: SY='D'; M= -7, 18,-25, 21,  2,-30, 19, -7,-33, -7,-28,-22, 16,-15, -5,-11,  4, -9,-27,-31,-23, -2;
/M: SY='K'; M=-11, -3,-25, -4,  3,-16,-18, -3,-21, 16,-15, -7, -1,-16,  4, 16, -7, -6,-17,-20, -5,  3;
/M: SY='x'; M= -1, -9,-18,-11, -7, -9,-17, -8, -7, -5, -9, -5, -6,-16, -7, -4,  0, -1, -1,-24, -6, -8;
/M: SY='W'; M=-20,-31,-36,-34,-27, 32,-25,-13, -9,-20, -6, -9,-29,-29,-22,-17,-29,-19,-16, 77, 44,-22;
/M: SY='H'; M=-19,  0,-22,  0, -1,-20,-20, 92,-30,-11,-20, -2,  9,-21,  8, -2,-10,-19,-29,-31, 17, -1;
/M: SY='P'; M= -6,-14,-26,-12, -2,-17,-21,-16, -5, -3, -8, -4,-13,  7, -6, -7, -7, -6, -5,-26,-15, -6;
/M: SY='E'; M= -2, 11,-23, 12, 18,-26,-10, -1,-25,  3,-22,-17,  9, -8,  7, -2,  5, -3,-22,-30,-16, 12;
/M: SY='C'; M=-11,-17, 99,-26,-26,-20,-29,-12,-30,-27,-20,-17,-16,-37,-24,-26,-10,-11,-13,-47,-23,-26;
/M: SY='F'; M=-16,-29,-20,-36,-27, 60,-29,-16,  4,-28, 14,  3,-21,-29,-34,-19,-20, -9,  3,  3, 25,-27;
/M: SY='R'; M= -5, -7,-13,-11, -6,-17,-20,-11,-14,  8,-14, -6, -4,-17, -2, 10, -2,  2, -6,-26,-10, -5;
/M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='A'; M=  6, -8, -4,-13, -8,-11,-14,-12,-11,-10,-11, -6, -6,-17, -7,-12,  6,  5, -5,-26,-10, -8;
/M: SY='E'; M= -6, -3,-20, -3,  1,-15,-19, -7, -8, -3, -8, -5, -4,-16, -3, -5, -4, -4, -5,-26, -9, -2;
/M: SY='C'; M= -9,-19,116,-29,-29,-20,-28,-29,-30,-29,-20,-20,-19,-39,-29,-29, -9,-10,-10,-49,-30,-29;
/M: SY='G'; M= -4,  3,-25,  2,  1,-24, 11, -1,-27, -1,-24,-14,  9,-15,  1, -2,  3, -8,-24,-27,-17,  0;
/M: SY='K'; M= -6, -4,-14, -7,  1,-21,-19, -7,-18, 11,-17, -7, -1,-15,  4, 10, -1,  0,-12,-27,-12,  2;
/M: SY='P'; M= -7, -5,-24, -6,  0,-20,-16, -3,-17, -2,-19,-10, -1,  8,  5, -2, -1, -3,-19,-26,-13,  1;
/M: SY='L'; M=-11,-29,-19,-32,-22, 16,-31,-21, 19,-29, 39, 17,-27,-29,-22,-19,-27,-10, 10,-17,  3,-22;
/M: SY='S'; M=  1,  4,-19,  3,  0,-23,  0,-10,-21, -5,-19,-15,  4,-13, -4, -7,  7,  2,-15,-29,-18, -2;
/M: SY='E'; M= -5,  1,-23,  2,  5,-23, -4, -9,-20, -5,-18,-13,  1, -2, -2, -8,  3, -2,-17,-30,-18,  1;
/I:         MD=-23;
/M: SY='G'; M= -4, -5,-21, -5, -4,-19,  9,-10,-19, -3,-15, -9, -3,-14, -5, -4,  0, -4,-13,-21,-15, -5; D=-4;
/I:         I=-5; MI=0; IM=0; DM=-23;
/M:         M= -7, -5,-23, -8, -4,-10, -7, -9,-17, -2,-14, -9, -1,-15, -5, -2, -1,  0,-14,-19, -7, -5;
/M: SY='F'; M=-13,-20,  9,-27,-23, 23,-27, -7, -6,-22,  0, -3,-17,-30,-23,-18,-14, -7, -3, -9, 18,-23;
/M: SY='F'; M= -8,-16,-21,-19,-17, 16,-22, -7, -1,-14,  0,  0,-13,-23,-17,-12,-11, -6,  0, -8, 14,-17;
/M: SY='E'; M= -6, -8,-24, -7,  3,-10,-17,-12, -8, -8, -5, -3, -9,-11, -5,-11, -6, -6, -8,-17, -8, -1;
/M: SY='R'; M=-12, -5,-26, -5,  2,-16,-20,  2,-16,  8,-13, -6, -3,-13,  3, 12, -8, -7,-13,-22, -4,  1;
/M: SY='D'; M=-10, 22,-27, 28, 15,-30, -4,  1,-30,  1,-24,-19, 13,-11,  2, -5,  0, -8,-25,-32,-17,  8;
/M: SY='G'; M= -4,  5,-27,  4, -4,-28, 28, -9,-32, -6,-27,-17,  9,-16, -7, -6,  3,-11,-26,-27,-23, -6;
/M: SY='R'; M= -8, -2,-27, -2,  8,-24,-16, -3,-21, 14,-16, -7, -2,-13, 11, 15, -5, -6,-17,-24,-11,  9;
/M: SY='I'; M= -6,-25,-25,-25,-17, -3,-27,-22, 13,-19, 11,  5,-22,  1,-18,-20,-16, -7,  7,-22, -8,-19;
/M: SY='Y'; M=-16,-23,-23,-25,-21, 25,-29,  4,  4,-18,  9,  4,-21,-28,-17,-14,-20, -9, -1, 10, 44,-21;
/M: SY='C'; M=-10,-20,118,-30,-30,-20,-30,-28,-30,-30,-20,-20,-20,-40,-29,-30,-10,-10,-10,-50,-29,-30;
/I:         I=-20; MI=0; IM=0;
/M: SY='K'; M=-10, -4,-27, -3,  9,-22,-16, -4,-21, 17,-19, -7, -2,-10,  8, 16, -6, -8,-17,-23,-11,  7;
/M: SY='E'; M= -5,  2,-25,  2,  4,-22,-12,  1,-21,  4,-20,-12,  3, -5,  3,  3,  1, -3,-18,-26,-11,  2;
/M: SY='C'; M=-16, 11, 25, 15, -4,-28,-19, 13,-34,-14,-24,-19,  3,-24, -9,-15, -6,-13,-23,-41,-14, -8;
/M: SY='Y'; M=-16,-17,-26,-20,-17, 26,-26, 17, -5,-13, -3, -1,-13,-26,-12,-10,-15, -9,-10, 10, 47,-17;
/M: SY='H'; M= -9, -6,-25, -6, -2, -8,-10,  1,-15,-10,-10, -8, -4,-13, -6, -9, -7, -9,-15,-17, -2, -5;
/M: SY='K'; M= -5, -1,-26, -2,  7,-24,-15, -7,-20, 16,-19, -8,  0,-11,  8, 14, -3, -6,-16,-24,-13,  6;
/M: SY='R'; M= -7, -8,-20,-10, -5,-12,-19, -7, -9, -2, -1, -1, -7,-18, -3,  3, -9, -4, -8,-22, -7, -5;
/M: SY='F'; M=-12,-19,-22,-24,-17, 24,-23, -7, -3,-16,  3,  1,-13,-22,-18,-10,-12, -5, -2, -8, 13,-17;
/M: SY='G'; M=  5, -4,-21, -6, -5,-23, 11,-13,-22, -5,-20,-13, -1,-14, -6, -8,  4, -5,-15,-25,-19, -6;
/M: SY='P'; M= -5, -9,-23, -8, -1,-21,-16,-14,-13, -4,-16,-11, -8, 12, -4, -7, -1,  0,-12,-28,-17, -5;
/I:         E0=0; E1=0; IE=-105; DE=-105;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 900 in 392 different sequences
Number of true positive hits 900 in 392 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.67 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann, CJA_Sigrist
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Feature key [info] DOMAIN
Feature description [info] LIM zinc-binding
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 392 sequences 

ABLM1_HUMAN (O14639    ), ABLM1_MOUSE (Q8K4G5    ), ABLM2_HUMAN (Q6H8Q1    ), 

ABLM2_MOUSE (Q8BL65    ), ABLM2_RAT   (Q6KC51    ), ABLM3_HUMAN (O94929    ), 
ABLM3_MOUSE (Q69ZX8    ), ADCE_DICDI  (Q55GN8    ), AJUBA_BOVIN (E1BKA3    ), 
AJUBA_DROME (Q9VY77    ), AJUBA_HUMAN (Q96IF1    ), AJUBA_MOUSE (Q91XC0    ), 
AJUBA_RAT   (Q5U2Z2    ), APTE_DROME  (P29673    ), AWH_DROME   (Q8IRC7    ), 
CRIP1_BOVIN (Q56K04    ), CRIP1_HUMAN (P50238    ), CRIP1_MOUSE (P63254    ), 
CRIP1_RAT   (P63255    ), CRIP2_BOVIN (Q0VFX8    ), CRIP2_HUMAN (P52943    ), 
CRIP2_MOUSE (Q9DCT8    ), CRIP2_PONAB (Q5R7Y1    ), CRIP2_RAT   (P36201    ), 
CRIP3_HUMAN (Q6Q6R5    ), CRIP3_MOUSE (Q6Q6R3    ), CSRP1_BOVIN (Q3MHY1    ), 
CSRP1_CHICK (P67966    ), CSRP1_COTJA (P67967    ), CSRP1_HUMAN (P21291    ), 
CSRP1_MOUSE (P97315    ), CSRP1_PONAB (Q5RCT4    ), CSRP1_RAT   (P47875    ), 
CSRP2_BOVIN (Q32LE9    ), CSRP2_CHICK (P50460    ), CSRP2_COTJA (Q05158    ), 
CSRP2_HUMAN (Q16527    ), CSRP2_MOUSE (P97314    ), CSRP2_RAT   (Q62908    ), 
CSRP3_BOVIN (Q4U0T9    ), CSRP3_HUMAN (P50461    ), CSRP3_MOUSE (P50462    ), 
CSRP3_RAT   (P50463    ), DA1_ARATH   (P0C7Q8    ), DAR1_ARATH  (Q8W4F0    ), 
DAR2_ARATH  (Q0WSN2    ), DAR4_ARATH  (Q9FKN7    ), DAR5_ARATH  (Q84WJ0    ), 
DAR6_ARATH  (Q9FJX8    ), DAR7_ARATH  (Q9FJX9    ), ESN_DROME   (Q9U1I1    ), 
ESN_DROPS   (Q292U5    ), FBLI1_BOVIN (Q1JQB5    ), FBLI1_HUMAN (Q8WUP2    ), 
FBLI1_MOUSE (Q71FD7    ), FBLI1_PONAB (Q5REN1    ), FHL1_HUMAN  (Q13642    ), 
FHL1_MOUSE  (P97447    ), FHL1_RAT    (Q9WUH4    ), FHL2_BOVIN  (Q2KI95    ), 
FHL2_HUMAN  (Q14192    ), FHL2_MOUSE  (O70433    ), FHL2_RAT    (O35115    ), 
FHL3_BOVIN  (Q3ZBI6    ), FHL3_HUMAN  (Q13643    ), FHL3_MOUSE  (Q9R059    ), 
FHL5_BOVIN  (Q2YDK0    ), FHL5_HUMAN  (Q5TD97    ), FHL5_MACFA  (Q4R7A4    ), 
FHL5_MOUSE  (Q9WTX7    ), FHL5_RAT    (Q6AXT1    ), HIL_DROME   (Q0E908    ), 
HM14_CAEEL  (P20271    ), ISL1_CHICK  (P50211    ), ISL1_DANRE  (P53405    ), 
ISL1_HUMAN  (P61371    ), ISL1_MESAU  (P61373    ), ISL1_MOUSE  (P61372    ), 
ISL1_RAT    (P61374    ), ISL2A_DANRE (P53406    ), ISL2A_ONCTS (P53408    ), 
ISL2B_DANRE (P53407    ), ISL2B_ONCTS (P50212    ), ISL2_CHICK  (P53410    ), 
ISL2_HUMAN  (Q96A47    ), ISL2_MOUSE  (Q9CXV0    ), ISL2_RAT    (P50480    ), 
ISL3_ONCTS  (P53409    ), LASP1_BOVIN (Q3B7M5    ), LASP1_CAEEL (P34416    ), 
LASP1_DROME (Q8I7C3    ), LASP1_HUMAN (Q14847    ), LASP1_MOUSE (Q61792    ), 
LASP1_PIG   (P80171    ), LASP1_PONAB (Q5R5W0    ), LASP1_RABIT (O77506    ), 
LASP1_RAT   (Q99MZ8    ), LDB3_HUMAN  (O75112    ), LDB3_MOUSE  (Q9JKS4    ), 
LHX1_CHICK  (P53411    ), LHX1_DANRE  (Q90476    ), LHX1_HUMAN  (P48742    ), 
LHX1_MESAU  (P63008    ), LHX1_MOUSE  (P63006    ), LHX1_PANTR  (Q5IS44    ), 
LHX1_RAT    (P63007    ), LHX1_SAIBB  (Q5IS89    ), LHX1_XENLA  (P29674    ), 
LHX2_HUMAN  (P50458    ), LHX2_MOUSE  (Q9Z0S2    ), LHX2_RAT    (P36198    ), 
LHX3_CHICK  (P53412    ), LHX3_DANRE  (Q90421    ), LHX3_HALRO  (Q25132    ), 
LHX3_HUMAN  (Q9UBR4    ), LHX3_MOUSE  (P50481    ), LHX3_PIG    (O97581    ), 
LHX3_XENLA  (P36200    ), LHX4_HUMAN  (Q969G2    ), LHX4_MOUSE  (P53776    ), 
LHX5_DANRE  (P52889    ), LHX5_HUMAN  (Q9H2C1    ), LHX5_MOUSE  (P61375    ), 
LHX5_RAT    (P61376    ), LHX5_XENLA  (P37137    ), LHX6_HUMAN  (Q9UPM6    ), 
LHX6_MOUSE  (Q9R1R0    ), LHX8_HUMAN  (Q68G74    ), LHX8_MOUSE  (O35652    ), 
LHX9_ASTFA  (A2I8Z7    ), LHX9_BOVIN  (A0JNI8    ), LHX9_CHICK  (Q90881    ), 
LHX9_DANRE  (Q1LWV4    ), LHX9_HUMAN  (Q9NQ69    ), LHX9_MOUSE  (Q9WUH2    ), 
LHX9_RAT    (Q80W90    ), LHX9_RUGRU  (A2PZF9    ), LHX9_XENLA  (Q68EY3    ), 
LIMA1_HUMAN (Q9UHB6    ), LIMA1_MOUSE (Q9ERG0    ), LIMA1_PIG   (B0KYV5    ), 
LIMA_DICDI  (Q54QR1    ), LIMB_DICDI  (Q54NW4    ), LIMC1_HUMAN (Q9UPQ0    ), 
LIMC1_MOUSE (Q3UH68    ), LIMC1_XENLA (Q3KQW7    ), LIMCH_DICDI (Q55GV9    ), 
LIMC_DICDI  (Q9BIW5    ), LIMD1_BOVIN (G5E5X0    ), LIMD1_HUMAN (Q9UGP4    ), 
LIMD1_MOUSE (Q9QXD8    ), LIMD1_RAT   (B5DEH0    ), LIMD1_XENLA (Q06BR1    ), 
LIMD1_XENTR (B7ZUL2    ), LIMD2_BOVIN (Q1LZA7    ), LIMD2_HUMAN (Q9BT23    ), 
LIMD2_MOUSE (Q8BGB5    ), LIMD2_RAT   (Q4KM31    ), LIMD_DICDI  (Q9BIW4    ), 
LIME_DICDI  (O60952    ), LIMF_DICDI  (Q86I44    ), LIMG_DICDI  (Q55DS4    ), 
LIMK1_CHICK (Q8QFP8    ), LIMK1_DROME (Q8IR79    ), LIMK1_HUMAN (P53667    ), 
LIMK1_MOUSE (P53668    ), LIMK1_RAT   (P53669    ), LIMK1_XENLA (O42565    ), 
LIMK2_BOVIN (Q32L23    ), LIMK2_CHICK (P53666    ), LIMK2_HUMAN (P53671    ), 
LIMK2_MOUSE (O54785    ), LIMK2_RAT   (P53670    ), LIMKA_DICDI (Q54L00    ), 
LIMKB_DICDI (P0CD62    ), LIMS1_HUMAN (P48059    ), LIMS1_MOUSE (Q99JW4    ), 
LIMS2_BOVIN (Q2KJ33    ), LIMS2_HUMAN (Q7Z4I7    ), LIMS2_MOUSE (Q91XD2    ), 
LIMS3_HUMAN (P0CW19    ), LIMS4_HUMAN (P0CW20    ), LIN11_CAEEL (P20154    ), 
LMCD1_BOVIN (Q17QE2    ), LMCD1_HUMAN (Q9NZU5    ), LMCD1_MOUSE (Q8VEE1    ), 
LMCD1_PIG   (Q5PXT2    ), LMO3_BOVIN  (Q2KIA3    ), LMO3_DANRE  (Q503U0    ), 
LMO3_HUMAN  (Q8TAP4    ), LMO3_MOUSE  (Q8BZL8    ), LMO3_PONAB  (Q5RBW7    ), 
LMO3_RAT    (Q99MB5    ), LMO3_XENLA  (Q9YH16    ), LMO41_XENTR (Q5FVB2    ), 
LMO42_XENTR (Q6DJ06    ), LMO4A_XENLA (Q8AW92    ), LMO4B_XENLA (Q801P0    ), 
LMO4_BOVIN  (Q3SWZ8    ), LMO4_HUMAN  (P61968    ), LMO4_MOUSE  (P61969    ), 
LMO7_HUMAN  (Q8WWI1    ), LMX1A_HUMAN (Q8TE12    ), LMX1A_MESAU (Q04650    ), 
LMX1A_MOUSE (Q9JKU8    ), LMX1B_CHICK (P53413    ), LMX1B_HUMAN (O60663    ), 
LMX1B_MESAU (Q60564    ), LMX1B_MOUSE (O88609    ), LMX1B_XENLA (Q8UVR3    ), 
LNEBL_MOUSE (Q9DC07    ), LPP_CHICK   (Q5F464    ), LPP_HUMAN   (Q93052    ), 
LPP_MOUSE   (Q8BFW7    ), LPP_RAT     (Q5XI07    ), LPXN_HUMAN  (O60711    ), 
LPXN_MOUSE  (Q99N69    ), LPXN_RABIT  (Q9N261    ), LRG1_YEAST  (P35688    ), 
MCA2B_DANRE (F1RA39    ), MCA3A_DANRE (F1QH17    ), MCA3B_DANRE (F1QWK4    ), 
MEC3_CAEBR  (P34764    ), MEC3_CAEEL  (P09088    ), MEC3_CAERE  (P34765    ), 
MICA1_BOVIN (F1MH07    ), MICA1_DANRE (E7F9T0    ), MICA1_HUMAN (Q8TDZ2    ), 
MICA1_MOUSE (Q8VDP3    ), MICA1_RAT   (D3ZBP4    ), MICA2_BOVIN (F1MF74    ), 
MICA2_HUMAN (O94851    ), MICA2_MOUSE (Q8BML1    ), MICA2_RAT   (D4A1F2    ), 
MICA2_XENTR (F6QZ15    ), MICA3_BOVIN (G3MWR8    ), MICA3_HUMAN (Q7RTP6    ), 
MICA3_MOUSE (Q8CJ19    ), MICAL_DROME (Q86BA1    ), MILK1_BOVIN (E1BBG2    ), 
MILK1_HUMAN (Q8N3F8    ), MILK1_MOUSE (Q8BGT6    ), MILK1_RAT   (D3ZQL6    ), 
MILK2_HUMAN (Q8IY33    ), MILK2_MOUSE (Q3TN34    ), MILK2_RAT   (D3ZEN0    ), 
MLP1_DROME  (P53777    ), MLP2_DROME  (Q24400    ), NRAP_HUMAN  (Q86VF7    ), 
NRAP_MOUSE  (Q80XB4    ), PAXB_DICDI  (Q8MML5    ), PAXI_CHICK  (P49024    ), 
PAXI_HUMAN  (P49023    ), PAXI_MOUSE  (Q8VI36    ), PAXI_PONAB  (Q5R7I1    ), 
PAXI_RAT    (Q66H76    ), PDLI1_BOVIN (Q5E9E1    ), PDLI1_HUMAN (O00151    ), 
PDLI1_MOUSE (O70400    ), PDLI1_RAT   (P52944    ), PDLI2_BOVIN (Q3T0C8    ), 
PDLI2_HUMAN (Q96JY6    ), PDLI2_MACFA (Q9GKU1    ), PDLI2_MOUSE (Q8R1G6    ), 
PDLI2_RAT   (Q6AYD6    ), PDLI3_BOVIN (Q3SYZ8    ), PDLI3_CHICK (Q9PU47    ), 
PDLI3_HUMAN (Q53GG5    ), PDLI3_MOUSE (O70209    ), PDLI3_PIG   (Q6QGC0    ), 
PDLI3_RAT   (Q66HS7    ), PDLI3_XENLA (Q6GLJ6    ), PDLI4_BOVIN (Q3T005    ), 
PDLI4_CHICK (Q9PW72    ), PDLI4_HUMAN (P50479    ), PDLI4_MOUSE (P70271    ), 
PDLI4_RAT   (P36202    ), PDLI5_HUMAN (Q96HC4    ), PDLI5_MOUSE (Q8CI51    ), 
PDLI5_RAT   (Q62920    ), PDLI7_BOVIN (Q3SX40    ), PDLI7_CHICK (Q679P3    ), 
PDLI7_DANRE (Q6P7E4    ), PDLI7_HUMAN (Q9NR12    ), PDLI7_MOUSE (Q3TJD7    ), 
PDLI7_RAT   (Q9Z1Z9    ), PDLI7_XENLA (Q6INU3    ), PIN2_CAEEL  (Q19157    ), 
PLI2A_ARATH (O80839    ), PLI2B_ARATH (Q1ECF5    ), PLI2C_ARATH (Q500W4    ), 
PRI1A_XENLA (Q90Z06    ), PRI1B_XENLA (Q90WV2    ), PRIC1_AEDAE (Q174I2    ), 
PRIC1_ANOGA (Q7QJT4    ), PRIC1_DROME (A1Z6W3    ), PRIC1_DROPS (Q292U2    ), 
PRIC1_HUMAN (Q96MT3    ), PRIC1_MOUSE (Q3U5C7    ), PRIC1_RAT   (Q71QF9    ), 
PRIC1_XENTR (Q28FG2    ), PRIC2_HUMAN (Q7Z3G6    ), PRIC2_MOUSE (Q80Y24    ), 
PRIC3_HUMAN (O43900    ), PRIC3_MOUSE (Q80VL3    ), PRIC4_HUMAN (Q2TBC4    ), 
PXL1_CAEEL  (Q09476    ), PXL1_YEAST  (P36166    ), RBTN1_BOVIN (Q0P5B3    ), 
RBTN1_DANRE (Q8JFQ2    ), RBTN1_HUMAN (P25800    ), RBTN1_MOUSE (Q924W9    ), 
RBTN1_XENLA (Q3B8H4    ), RBTN2_BOVIN (Q1LZ94    ), RBTN2_DANRE (Q9PTJ3    ), 
RBTN2_HUMAN (P25791    ), RBTN2_MOUSE (P25801    ), RBTN2_XENLA (Q90XH3    ), 
RBTN2_XENTR (Q5M8V8    ), RGA1_SCHPO  (O43052    ), RGA1_YEAST  (P39083    ), 
RGA2_YEAST  (Q06407    ), RGA3_SCHPO  (O14014    ), RGA4_SCHPO  (O74360    ), 
SCEL_HUMAN  (O95171    ), SCEL_MOUSE  (Q9EQG3    ), SF3_HELAN   (P29675    ), 
TES_AOTNA   (Q07DW1    ), TES_ATEAB   (Q00PK1    ), TES_ATEGE   (Q09YL5    ), 
TES_BOVIN   (Q2YDE9    ), TES_CALJA   (Q2QLG8    ), TES_CANLF   (A0M8U6    ), 
TES_CHICK   (Q90YH9    ), TES_CHLAE   (Q2IBA3    ), TES_COLGU   (Q07DZ4    ), 
TES_DASNO   (Q07E51    ), TES_EULMM   (Q2IBH0    ), TES_FELCA   (A0M8S5    ), 
TES_HORSE   (Q2QLB2    ), TES_HUMAN   (Q9UGI8    ), TES_LOXAF   (Q108U9    ), 
TES_MICMU   (Q2QL92    ), TES_MONDO   (Q2QLA1    ), TES_MOUSE   (P47226    ), 
TES_MUNMU   (Q09YK3    ), TES_MUNRE   (Q07DX3    ), TES_MUSPF   (Q07E27    ), 
TES_NEONE   (Q07E40    ), TES_NOMLE   (Q07DY3    ), TES_OTOGA   (Q2QLH9    ), 
TES_PANTR   (Q2QLF4    ), TES_PAPAN   (A0M8R4    ), TES_PIG     (Q2QLE3    ), 
TES_PLEMO   (Q2QLC3    ), TES_PONAB   (Q5RC52    ), TES_RABIT   (Q09YN8    ), 
TES_RAT     (Q2LAP6    ), TES_RHIFE   (Q2IBC3    ), TES_SAIBB   (Q09YI0    ), 
TES_SHEEP   (Q09YJ2    ), TES_XENLA   (Q7ZXE9    ), TES_XENTR   (Q6DIR5    ), 
TGFI1_BOVIN (Q3MHZ4    ), TGFI1_HUMAN (O43294    ), TGFI1_MOUSE (Q62219    ), 
TGFI1_RAT   (Q99PD6    ), TGFI1_XENLA (Q2TCH4    ), TRIP6_BOVIN (Q3SX26    ), 
TRIP6_HUMAN (Q15654    ), TRIP6_MOUSE (Q9Z1Y4    ), TTX3_CAEEL  (G5EE86    ), 
UNC97_CAEEL (P50464    ), WLI2A_ARATH (O04193    ), WLI2B_ARATH (Q9M047    ), 
WLIM1_ARATH (Q94JX5    ), WTIP_DANRE  (A8DZE6    ), WTIP_HUMAN  (A6NIX2    ), 
WTIP_MOUSE  (Q7TQJ8    ), WTIP_XENLA  (A9LS46    ), XIRP2_MOUSE (Q4U4S6    ), 
Y6787_DICDI (Q55BI0    ), YOCC_SCHPO  (O74398    ), ZASP_DROME  (A1ZA47    ), 
ZN185_HUMAN (O15231    ), ZN185_MOUSE (Q62394    ), ZYX_CAEEL   (Q9U3F4    ), 
ZYX_CHICK   (Q04584    ), ZYX_HUMAN   (Q15942    ), ZYX_MOUSE   (Q62523    ), 
ZYX_XENLA   (A5H447    ), ZYX_XENTR   (Q0VA45    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

HEL2_SCHPO  (Q76PD2    ), HEL2_YEAST  (Q05580    ), Y2098_DICDI (Q55A66    )


				
	

	

		PDB
[Detailed view]		
		
			65 PDB
			


			1A7I; 1B8T; 1CTL; 1CXX; 1G47; 1IBI; 1IML; 1J2O; 1M3V; 1NYP; 1QLI; 1RUT; 
			
				1U5S; 1V6G; 1WIG; 1WYH; 1X3H; 1X4K; 1X4L; 1X61; 1X62; 1X63; 1X64; 1X68; 
				1X6A; 1ZFO; 2CO8; 2COR; 2CU8; 2CUP; 2CUQ; 2CUR; 2D8X; 2D8Y; 2D8Z; 2DAR; 
				2DFY; 2DJ7; 2DLO; 2EGQ; 2EHE; 2IYB; 2JTN; 2KBX; 2L4Z; 2L6Y; 2L6Z; 2LXD; 
				2LZU; 2MBV; 2MIU; 2O10; 2O13; 2RGT; 2XJY; 2XJZ; 2XQN; 2YPA; 3F6Q; 3IXE; 
				3MMK; 4HI8; 4HI9; 4JCJ; 4KFZ
			
			

			» more

				
	





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