Entry: PS50137

Forthcoming changes to the profile format
General information about the entry

Entry name [info] DS_RBD
Accession [info] PS50137
Entry type [info] MATRIX
Date [info] DEC-2001 (CREATED); OCT-2013 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC50137
Associated ProRule [info] PRU00266

Name and characterization of the entry

Description [info] Double stranded RNA-binding domain (dsRBD) profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=69;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=64;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.5994; R2=.02427627; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=2455.63158; R2=15.47368; TEXT='HScore';
/CUT_OFF: LEVEL=0; SCORE=284; N_SCORE=8.5; H_SCORE=6216; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=201; N_SCORE=6.5; H_SCORE=5581; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=-60; E1=-60; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='N'; M= -9, 24,-22, 20,  4,-20, -9,  7,-24, -2,-24,-18, 27,-15,  0, -3,  7,  2,-23,-34,-13,  2;
/M: SY='P'; M= -2,-19,-26,-17,-10,-14,-17,-14,-11,-12,-17,-11,-18, 31,-12,-18, -8, -8,-15,-15, -7,-14;
/M: SY='V'; M= -7,-17,-20,-20,-13,-12,-27,-20,  7,  3, -2,  6,-15,-16,-10, -4,-13, -5, 10,-24, -8,-13;
/M: SY='S'; M= -4,  1,-19,  1,  2,-23, -4,-10,-21,  0,-20,-12,  3,-14,  0,  0,  6,  1,-15,-29,-17,  0;
/M:         M= -1,-13,-22,-14, -3,-10,-15,-13, -9, -1, -4, -2,-11,-14, -3,  0, -7, -6, -6,-20,-10, -3;
/M: SY='L'; M= -9,-30,-19,-30,-22,  8,-30,-21, 23,-28, 42, 21,-29,-29,-20,-20,-27, -9, 16,-21, -1,-21;
/M: SY='N'; M= -8,  6,-23, -2, -1,-14,-15,  9,-10, -4,-10, -1, 13,-19,  8, -3, -3, -6,-17,-23, -2,  2;
/M: SY='E'; M= -2,  5,-26,  9, 28,-26,-16, -4,-23,  7,-18,-13, -1, -7, 14,  0,  2, -6,-21,-26,-14, 20;
/M: SY='F'; M=-13,-26,-16,-30,-23, 23,-28,-14,  4,-22, 13,  3,-23,-29,-21,-18,-21,-10,  0,  8, 22,-22;
/M: SY='A'; M=  6,-13, -2,-19,-12,-10,-12,-16, -8,-11, -5, -2, -9,-19,-11,-12, -3, -4, -4,-25,-13,-11;
/I:         MD=-25;
/M: SY='Q'; M= -8, -1,-25, -1, 13,-27,-12,  2,-21,  8,-17, -6,  1,-11, 26, 11, -1, -5,-22,-21,-11, 18; D=-4;
/I:         I=-5; MI=0; MD=-15; IM=0; DM=-15;
/M: SY='K'; M= -9, -5,-25, -7,  2,-16,-15, -4,-16, 14,-15, -3, -2,-15,  4, 12, -5, -6,-13,-20, -5,  2; D=-4;
/I:         DM=-15;
/M: SY='R'; M= -8, -6,-25, -8, -1,-15,-16,  1,-13,  2, -8, -4, -3,-17,  1,  5, -7, -5,-12,-22, -4, -1;
/M: SY='R'; M= -7, -4,-27, -4, -3,-19, -3, -9,-21,  4,-14,-10, -2,-18, -1,  6, -7,-10,-18,-14,-10, -3;
/M: SY='M'; M=-11,-17,-24,-20,-11, -1,-21,-14, -1, -9, -3,  1,-12, -7, -8, -5,-13, -9, -4,-19, -6,-11;
/M: SY='T'; M= -4, -2,-23, -4,  0,-19,-11, -4,-15, -5,-12, -8,  0,-11,  0, -4,  1,  2,-13,-27,-12, -1;
/M: SY='P'; M= -7,-21,-14,-20,-15,-13,-22,-19, -1,-17, -2, -2,-21, 10,-17,-19,-14, -8, -1,-24,-15,-18;
/M: SY='E'; M= -8,  6,-22,  4,  9,-19,-17, -1,-15,  0,-16,-10,  8,-12,  5, -2,  4,  4,-14,-29,-12,  6;
/M: SY='Y'; M=-19,-23,-27,-25,-21, 42,-29,  5, -1,-16,  3, -1,-20,-29,-19,-13,-19,-10, -8, 23, 58,-21;
/M: SY='E'; M=-11,  1,-27,  4, 13,-22,-15, -7,-22, 13,-15,-11, -1,-13,  4, 11, -5, -6,-17,-24,-11,  8;
/M: SY='L'; M=-10,-15,-22,-15,-11, -2,-27,-16,  8,-17, 13,  5,-17,-22,-12,-16,-14, -3,  6,-18, -1,-12;
/M: SY='V'; M= -6,-15,-12,-18,-13, -8,-26,-19,  7,-12,  3,  1,-13,-21,-13,-11, -7,  0, 10,-26, -7,-14;
/I:         MD=-21;
/M: SY='E'; M= -2,  0,-24,  3, 10,-24,-15, -6,-17,  1,-18,-12, -1,  0,  6, -4,  3, -3,-15,-28,-15,  7; D=-4;
/I:         MD=-21;
/M: SY='E'; M= -6,  4,-20,  6, 15,-20,-12, -3,-16,  6,-13, -9,  1, -7, 10,  2, -1, -3,-15,-20,-11, 12; D=-4;
/I:         I=-2; MI=0; MD=-21; IM=0; DM=-21;
/M: SY='T'; M= -2, -6,-15, -6,  0,-14,-11,-11, -9, -6,-11, -8, -3, -1, -3, -6,  7,  8, -5,-24,-13, -2; D=-4;
/I:         DM=-21;
/M: SY='G'; M=  0, -3,-22, -5,-11,-22, 38,-13,-28,-13,-23,-16,  5,-15,-12,-12,  4, -8,-21,-21,-22,-12; D=-4;
/I:         DM=-21;
/M: SY='P'; M= -5, -8,-26, -5,  1,-21,-11,-12,-14, -7,-16,-11, -7, 24, -4,-11, -3, -4,-16,-26,-19, -3; D=-4;
/I:         DM=-21;
/M: SY='A'; M=  5, -3,-22, -1,  1,-23, -4,-12,-17, -6,-20,-14, -3,  1, -5,-12,  5, -3,-11,-29,-20, -3;
/M: SY='H'; M=-13,  2,-27, -1, -4,-20, -3, 41,-25, -6,-18, -5, 10,-19,  2, -1, -5,-13,-25,-28,  0, -3;
/M: SY='E'; M= -3,  0,-18,  1,  3,-24,-13, -6,-22,  1,-19,-12,  0, -3,  3,  2,  2, -1,-18,-29,-16,  1;
/M: SY='P'; M=-11, -7,-26, -6,  5,-24,-20, -2,-18,  6,-20, -8, -5, 10,  8,  5, -7, -9,-19,-25,-13,  4;
/M: SY='R'; M= -9, -6,-25, -6,  2,-19,-11, -6,-17,  6,-16, -8, -1,-13,  3, 12, -1, -3,-13,-24,-11,  1;
/M: SY='F'; M=-18,-27,-14,-35,-27, 59,-29,-16, -2,-27,  5, -2,-19,-29,-33,-19,-17, -8, -1,  8, 26,-27;
/M: SY='T'; M= -5,-15,-19,-20,-13, -6,-26,-16,  8,-12,  7,  6,-14,-19,-10,-12, -5,  9,  9,-24, -4,-13;
/M: SY='V'; M= -1,-21,  7,-28,-22,  5,-24,-18,  4,-19,  1,  5,-19,-25,-20,-19,-10, -4,  9,-20, -1,-21;
/M: SY='E'; M= -5, -3,-10, -4, 10,-21,-20, -4,-18,  1,-17,-10, -2,-13,  7, -1,  2,  0,-15,-27,-10,  8;
/M: SY='V'; M= -3,-26, 13,-29,-25, -4,-28,-25, 12,-22, 11,  7,-25,-30,-24,-20,-14, -5, 21,-30,-12,-25;
/M: SY='R'; M= -7, -9,-23,-11, -3, -8,-22,-13, -6, -1, -8, -4, -8,-16, -5,  1, -4, -1, -3,-19, -6, -4;
/M: SY='V'; M= -4,-24,-18,-29,-25,  1,-27,-25, 25,-22, 14, 12,-21,-24,-22,-21,-11, -1, 27,-25, -6,-24;
/M: SY='G'; M= -8, 10,-24, 12,  2,-26, 13, -7,-30, -6,-27,-20, 10, -9, -4,-10,  2, -9,-26,-28,-18, -2;
/M: SY='G'; M= -4, -2,-26,  0, -2,-27, 14,-12,-24, -8,-22,-14,  0, -7, -3,-11,  2, -8,-19,-26,-21, -3;
/M: SY='Q'; M= -5, -9,-24,-12, -2,-12,-21, -8, -7,  0, -9, -4, -5,-13,  2,  2, -4, -2, -7,-21, -6, -2;
/M: SY='T'; M= -4, -4,-22, -6,  5,-16,-17,-13,-12, -2,-14, -9, -4, -6, -1, -6,  2,  6, -9,-23,-13,  1;
/I:         MD=-17;
/M: SY='Y'; M=-12,-17,-19,-18,-15, 22,-23, -4,  2,-13,  5,  1,-15,-19,-16,-11,-14, -7,  0,  0, 23,-16; D=-3;
/I:         I=-5; MI=0; MD=-17; IM=0; DM=-17;
/M: SY='G'; M=  5, -7, -6, -9, -8,-18,  6,-16,-19,-11,-18,-14, -6, -1,-11,-14,  3, -3,-13,-23,-19,-10; D=-3;
/I:         DM=-17;
/M: SY='E'; M= -5, -6,-22, -7,  4,-16,-19, -3,-13,  1,-13, -6, -5,-11,  0,  3,  1,  3, -7,-26,-10,  1;
/M: SY='G'; M=  9,-10,-24,-12,-14,-24, 41,-19,-28,-16,-22,-16, -4,-17,-17,-19,  2,-12,-18,-21,-25,-15;
/M: SY='S'; M= -3, -1,-14, -4, -2,-15,-16, -8,-11, -6,-15, -9,  1,-16, -4, -8,  5,  4, -7,-26,-10, -3;
/M: SY='G'; M=  7, -8,-25, -9,-15,-27, 49,-18,-33,-16,-27,-19,  1,-18,-15,-16,  6,-12,-24,-23,-27,-15;
/M: SY='T'; M= -3, -6,-18, -8, -5,-16,-13,-10,-17, -2,-20,-12,  0, -1, -4,  1,  8,  9,-12,-28,-13, -6;
/M: SY='S'; M=  1, 12,-15,  4, -2,-19, -2, -5,-19, -5,-27,-18, 23,-13, -1, -5, 24, 15,-15,-37,-18, -2;
/M: SY='K'; M=-11, -4,-26, -5,  4,-24,-21, -8,-23, 34,-22, -7, -3,-13,  7, 24,-10, -9,-16,-20, -7,  5;
/M: SY='K'; M=-11, -1,-30,  0, 12,-30,-18, -7,-29, 39,-27,-10,  0,-11, 15, 29, -8,-10,-22,-21,-11, 13;
/M: SY='E'; M= -5,  3,-23,  7, 11,-21,-19, -8,-12, -2,-11,-10, -2,-13,  1, -6, -1, -3, -8,-29,-14,  5;
/M: SY='A'; M= 44, -9,-11,-18, -9,-20,  1,-19,-12,-10,-13,-11, -8, -9, -9,-19, 12,  1, -2,-22,-20, -9;
/M: SY='K'; M= -7,  0,-29,  0, 14,-29,-14, -4,-28, 29,-25,-11,  0,-10, 14, 21, -5,-10,-22,-22,-12, 14;
/M: SY='Q'; M= -2,  0,-24, -5,  2,-24,-12,  3,-15,  3,-16, -6,  6,-15, 16,  5,  1, -5,-17,-25,-11,  8;
/M: SY='N'; M= -4,  4,-22,  1, -1,-17,-15, -1,-13, -2,-10, -7,  6,-17, -1,  1, -2, -3,-12,-27, -9, -2;
/M: SY='A'; M= 41,-12,  4,-22,-13,-19, -5,-22,-10,-13,-10,-10,-12,-14,-13,-21,  7, -1,  1,-24,-21,-13;
/M: SY='A'; M= 48,-10, -7,-20,-11,-20, -1,-20,-11,-11,-10,-10,-10,-11,-11,-20,  9,  0,  0,-21,-20,-11;
/M: SY='K'; M= -7, -7,-24, -7,  5,-17,-20, -7,-12,  8, -9, -2, -8,-15,  3,  6, -7, -5, -8,-21, -9,  3;
/M: SY='B'; M= -7,  7,-24,  7,  6,-21,-15, -6,-18,  5,-14,-10,  5,-15,  3,  4, -2, -5,-16,-28,-13,  4;
/M: SY='A'; M= 24,-18,-15,-26,-17, -3,-13,-19,  4,-16,  3,  2,-16,-17,-15,-20, -3, -3,  7,-17, -8,-16;
/M: SY='L'; M= -9,-28,-13,-30,-23,  9,-30,-19, 17,-25, 30, 15,-28,-30,-21,-19,-24, -8, 15,-15,  4,-22;
/M: SY='Q'; M=-12,  5,-28,  7, 15,-28,-18, -1,-23, 14,-19, -9,  4,-12, 19, 16, -4, -7,-21,-25,-13, 16;
/M: SY='Q'; M= -7, -7,-26, -7,  1,-14,-23, -5, -6,  3, -8, -3, -8,-16,  4, -2, -9, -9, -7,-16,  3,  1;
/M: SY='L'; M=-10,-28,-21,-30,-20,  9,-29,-19, 18,-25, 38, 21,-27,-28,-18,-18,-26, -9, 10,-16,  1,-19;
/M:         M= -7, -7,-24, -7, -6, -8,-11, -7,-10, -6, -6, -4, -7,-19, -7, -7, -8, -9, -7,-20, -4, -7;
/M:         M= -8, -5,-22, -7, -3,-17,-12, -1,-14, -2,-10, -4, -3,-14, -1,  0, -5, -4,-13,-23, -7, -3;
/I:         E1=0; IE=-105; DE=-105;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 742 in 630 different sequences
Number of true positive hits 741 in 629 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 32
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.87 %
Recall (true positives / (true positives + false negatives)) 95.86 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] K_Hofmann
Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 5
Feature key [info] DOMAIN
Feature description [info] DRBM
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
629 sequences

340R_IIV6   (Q91FI4), A464_PBCV1  (Q98514), ADAD1_HUMAN (Q96M93), 
ADAD1_MOUSE (Q5SUE7), ADAD1_RAT   (Q3KR54), ADAD1_XENLA (Q32NG0), 
ADAD2_HUMAN (Q8NCV1), ADAD2_MACFA (Q95JV3), ADAD2_MOUSE (Q9D5P4), 
ADAR_DROME  (Q9NII1), ADR2_CAEEL  (Q22618), CARF_HUMAN  (Q9NXV6), 
CARF_MOUSE  (Q8BI72), CARF_RAT    (Q5U2X0), CPL1_ARATH  (Q5YDB6), 
CPL2_ARATH  (Q5YDB5), DCL1_ARATH  (Q9SP32), DCL1_CHAGB  (Q2H0G2), 
DCL1_ORYSJ  (Q8LMR2), DCL2A_ORYSJ (Q10HL3), DCL2B_ORYSJ (Q69LX2), 
DCL2_ARATH  (Q3EBC8), DCL2_MAGO7  (A4RHU9), DCL2_NEUCR  (Q7SCC1), 
DCL4_ARATH  (P84634), DCL4_ORYSJ  (A7LFZ6), DCR1_CAEEL  (P34529), 
DCR1_DROME  (Q9VCU9), DGCR8_BOVIN (A6QR44), DGCR8_HUMAN (Q8WYQ5), 
DGCR8_MOUSE (Q9EQM6), DHX9_BOVIN  (Q28141), DHX9_CAEEL  (Q22307), 
DHX9_HUMAN  (Q08211), DHX9_MOUSE  (O70133), DHX9_PONAB  (Q5R874), 
DHX9_XENLA  (Q68FK8), DICER_BOVIN (Q6TUI4), DICER_CHICK (Q25BN1), 
DICER_CRIGR (A0MQH0), DICER_DANRE (Q6TV19), DICER_HUMAN (Q9UPY3), 
DICER_MOUSE (Q8R418), DICER_XENTR (B3DLA6), DRB1_ARATH  (O04492), 
DRB1_ORYSJ  (Q5N8Z0), DRB2_ARATH  (Q9SKN2), DRB2_ORYSJ  (Q0DKP4), 
DRB3_ARATH  (Q9LJF5), DRB3_ORYSJ  (Q0DJA3), DRB4_ARATH  (Q8H1D4), 
DRB4_ORYSJ  (Q6YW64), DRB5_ARATH  (Q8GY79), DRB5_ORYSJ  (B7E321), 
DRB6_ORYSJ  (Q9AV50), DRB7_ORYSJ  (Q0IV63), DRB8_ORYSJ  (Q0IQN6), 
DSRAD_HUMAN (P55265), DSRAD_MOUSE (Q99MU3), DSRAD_RAT   (P55266), 
E2AK2_HUMAN (P19525), E2AK2_MOUSE (Q03963), E2AK2_RAT   (Q63184), 
E3_VACCC    (P21081), E3_VACCW    (P21605), E3_VAR67    (P33863), 
ILF3A_XENLA (Q91550), ILF3B_XENLA (Q6DD04), ILF3_DANRE  (Q6NXA4), 
ILF3_HUMAN  (Q12906), ILF3_MOUSE  (Q9Z1X4), ILF3_RAT    (Q9JIL3), 
ILF3_XENTR  (Q6GL57), MLE_DROME   (P24785), NS5_BAVJK   (Q9YIT9), 
NSP1N_ROTB2 (Q0H8C5), NSP1N_ROTJ1 (Q45UF6), NSP3_ROTBS  (P34717), 
NSP3_ROTHC  (Q9PY95), NSP3_ROTPC  (P27586), PAC1_SCHPO  (P22192), 
POLN_DCVEB  (O36966), PRKAA_XENLA (Q7ZYA5), PRKAB_XENLA (Q91836), 
PRKRA_BOVIN (Q2HJ92), PRKRA_DANRE (B0V3F8), PRKRA_HUMAN (O75569), 
PRKRA_MOUSE (Q9WTX2), PRKRA_RAT   (Q4V8C7), RED1_HUMAN  (P78563), 
RED1_MOUSE  (Q91ZS8), RED1_RAT    (P51400), RED2_HUMAN  (Q9NS39), 
RED2_MOUSE  (Q9JI20), RED2_RAT    (P97616), RM03_YEAST  (P36516), 
RM44_HUMAN  (Q9H9J2), RM44_MOUSE  (Q9CY73), RM44_PONAB  (Q5REY8), 
RNC1_NOSS1  (Q8Z023), RNC1_SYNY3  (P74368), RNC2_NOSS1  (Q8YPT4), 
RNC2_SYNY3  (Q55637), RNC_ACIAD   (Q6F9C2), RNC_ACIB3   (B7GYT0), 
RNC_ACIBS   (B0VTM5), RNC_ACIBT   (A3M7P2), RNC_ACIBY   (B0VCU0), 
RNC_ACICP   (F0KKL2), RNC_ACTP2   (A3MZQ9), RNC_ACTPJ   (B0BUA6), 
RNC_ACTSZ   (A6VLV8), RNC_AGRRK   (B9JC73), RNC_AGRT5   (Q8UGK2), 
RNC_AGRVS   (B9JUN7), RNC_ALCBS   (Q0VP19), RNC_ALKEH   (Q0A8Z1), 
RNC_ANAMF   (B9KGT5), RNC_ANAMM   (Q5P9U8), RNC_ANAPZ   (Q2GIW0), 
RNC_ANOFW   (B7GGE9), RNC_AQUAE   (O67082), RNC_ARCB4   (A8EV88), 
RNC_AROAE   (Q5P086), RNC_AYWBP   (Q2NJY3), RNC_AZOC5   (A8I3B5), 
RNC_AZOPC   (B6YQI6), RNC_AZOVD   (C1DQS2), RNC_BACA2   (A7Z4L3), 
RNC_BACAA   (C3P5Q0), RNC_BACAC   (C3L778), RNC_BACAN   (Q81WI8), 
RNC_BACC0   (B7JJT6), RNC_BACC1   (Q732M1), RNC_BACC2   (B7IUK8), 
RNC_BACC3   (C1EP73), RNC_BACC4   (B7HDX2), RNC_BACC7   (B7HLI2), 
RNC_BACCN   (A7GRH9), RNC_BACCQ   (B9IVD8), RNC_BACCR   (Q819V8), 
RNC_BACCZ   (Q636H7), RNC_BACFN   (Q5LIS2), RNC_BACFR   (Q64ZV9), 
RNC_BACHD   (Q9KA05), RNC_BACHK   (Q6HEW6), RNC_BACLD   (Q65JQ5), 
RNC_BACSK   (Q5WFM6), RNC_BACSU   (P51833), RNC_BACTN   (Q8A2E8), 
RNC_BACV8   (A6KZ76), RNC_BACWK   (A9VT87), RNC_BARBK   (A1US36), 
RNC_BARHE   (Q6G459), RNC_BARQU   (Q6G082), RNC_BART1   (A9IRN0), 
RNC_BDEBA   (Q6MLR5), RNC_BIFLO   (Q8G7H1), RNC_BLOFL   (Q7VRR0), 
RNC_BLOPB   (Q492D1), RNC_BORA1   (Q2KWY0), RNC_BORAP   (Q0SMF0), 
RNC_BORBR   (Q7WD32), RNC_BORBU   (O51648), RNC_BORGA   (Q660G7), 
RNC_BORPA   (Q7W5J6), RNC_BORPD   (A9IIJ2), RNC_BORPE   (Q7VW39), 
RNC_BRADU   (O69161), RNC_BRUA1   (B2SAD9), RNC_BRUA2   (Q2YN02), 
RNC_BRUAB   (Q57E81), RNC_BRUC2   (A9MA35), RNC_BRUMB   (C0RI03), 
RNC_BRUME   (P66664), RNC_BRUSI   (B0CKY7), RNC_BRUSU   (P66665), 
RNC_BUCA5   (B8D951), RNC_BUCAI   (P57346), RNC_BUCAP   (Q8K9R1), 
RNC_BUCAT   (B8D7F5), RNC_BUCBP   (P59476), RNC_BUCCC   (Q057R4), 
RNC_CAEBR   (Q61XX9), RNC_CAEEL   (O01326), RNC_CALS4   (Q8R9W3), 
RNC_CAMC1   (A8Z6F6), RNC_CAMC5   (A7H186), RNC_CAMFF   (A0RRM7), 
RNC_CAMJ8   (A8FNU7), RNC_CAMJD   (A7H5Y2), RNC_CAMJE   (Q9PM40), 
RNC_CAMJR   (Q5HSF8), RNC_CARHZ   (Q3AC58), RNC_CAUCN   (B8H627), 
RNC_CAUCR   (Q9A805), RNC_CAUSK   (B0T3I0), RNC_CHLAA   (A9WJ69), 
RNC_CHLAB   (Q5L6E3), RNC_CHLAD   (B8GAM6), RNC_CHLCH   (Q3AQ14), 
RNC_CHLCV   (Q823R4), RNC_CHLFF   (Q253V2), RNC_CHLMU   (Q9PK97), 
RNC_CHLPN   (Q9Z9C7), RNC_CHLSY   (B9LB70), RNC_CHLT2   (B0B7L3), 
RNC_CHLTA   (Q3KM65), RNC_CHLTB   (B0BBS8), RNC_CHLTE   (Q8KAN7), 
RNC_CHLTR   (O84299), RNC_CHRVO   (Q7NWC4), RNC_CLOAB   (Q97IA4), 
RNC_CLOB8   (A6LSM2), RNC_CLOBA   (B2V4D6), RNC_CLOBB   (B2TJ22), 
RNC_CLOK1   (B9E1G8), RNC_CLOK5   (A5N807), RNC_CLOPE   (Q8XJN8), 
RNC_CLOTE   (Q895M9), RNC_COLP3   (Q47WP5), RNC_CORDI   (Q6NGH3), 
RNC_COREF   (Q8FP16), RNC_CORGL   (Q8NNV6), RNC_CORJK   (Q4JUY7), 
RNC_COXB1   (B6J4J9), RNC_COXB2   (B6IYZ9), RNC_COXBN   (A9KFA0), 
RNC_COXBR   (A9N942), RNC_COXBU   (P51837), RNC_CUPNH   (Q0K8N3), 
RNC_CUPPJ   (Q46Z18), RNC_CUPTR   (B3R1Z9), RNC_DECAR   (Q47EF7), 
RNC_DEHM1   (Q3Z7Q8), RNC_DEHMC   (Q3ZXY9), RNC_DELAS   (A9BNJ5), 
RNC_DESAG   (Q310Z1), RNC_DESPS   (Q6ANV0), RNC_DESRM   (A4J683), 
RNC_DESVH   (Q72C44), RNC_DESVM   (B8DPB3), RNC_DINSH   (A8LLD9), 
RNC_ECO24   (A7ZQ11), RNC_ECO27   (B7UH07), RNC_ECO45   (B7MIQ2), 
RNC_ECO55   (B7LDG0), RNC_ECO57   (P0A7Y2), RNC_ECO5E   (B5Z141), 
RNC_ECO7I   (B7NRM0), RNC_ECO81   (B7MYJ8), RNC_ECO8A   (B7M8I0), 
RNC_ECOBW   (C4ZYJ0), RNC_ECODH   (B1XB41), RNC_ECOHS   (A8A377), 
RNC_ECOK1   (A1AE97), RNC_ECOL5   (Q0TES1), RNC_ECOL6   (P0A7Y1), 
RNC_ECOLC   (B1IVR0), RNC_ECOLI   (P0A7Y0), RNC_ECOLU   (B7N6F5), 
RNC_ECOSE   (B6I5E1), RNC_ECOSM   (B1LP80), RNC_ECOUT   (Q1R8G6), 
RNC_EDWI9   (C5B8Y2), RNC_EHRCJ   (Q3YQX7), RNC_EHRCR   (Q2GFE4), 
RNC_EHRRG   (Q5FGH0), RNC_EHRRW   (Q5HA74), RNC_ENT38   (A4WDD8), 
RNC_ENTFA   (Q82ZG1), RNC_ERWT9   (B2VI46), RNC_ESCF3   (B7LUZ7), 
RNC_FLAPJ   (A6GW45), RNC_FRAP2   (B0TXH8), RNC_FRAT1   (Q14G66), 
RNC_FRATF   (A7NAR0), RNC_FRATH   (Q2A4N2), RNC_FRATM   (B2SFY4), 
RNC_FRATN   (A0Q7W6), RNC_FRATO   (Q0BN07), RNC_FRATT   (Q5NER3), 
RNC_FRATW   (A4IWK9), RNC_FUSNN   (Q8RGX3), RNC_GEOKA   (Q5L0Q3), 
RNC_GEOMG   (Q39T82), RNC_GEOSL   (Q74AX1), RNC_GEOSW   (C5D8T6), 
RNC_GEOTN   (A4IM67), RNC_GLOVI   (Q7NH89), RNC_HAEDU   (Q7VL75), 
RNC_HAEI8   (Q4QPN0), RNC_HAEIE   (A5UBC4), RNC_HAEIG   (A5UFI8), 
RNC_HAEIN   (P44441), RNC_HAEPS   (B8F3C7), RNC_HAHCH   (Q2SL32), 
RNC_HAMD5   (C4K3Z3), RNC_HELAH   (Q17XJ6), RNC_HELHP   (Q7VIA9), 
RNC_HELMI   (B0TGW4), RNC_HELP2   (B6JLQ0), RNC_HELPG   (B5Z735), 
RNC_HELPJ   (Q9ZLH2), RNC_HELPS   (B2UTG4), RNC_HELPY   (P56118), 
RNC_HISS2   (B0USS1), RNC_HUMAN   (Q9NRR4), RNC_HYDS0   (B4U7T8), 
RNC_IDILO   (Q5R106), RNC_IIV6    (O55748), RNC_JANSC   (Q28V23), 
RNC_KLEP3   (B5XNH0), RNC_KLEP7   (A6TCI1), RNC_LACAC   (Q5FJJ7), 
RNC_LACF3   (B2GD42), RNC_LACJO   (Q74IP8), RNC_LACLA   (Q9CHD0), 
RNC_LACLM   (A2RLZ8), RNC_LACLS   (Q030F9), RNC_LACPL   (Q88WK0), 
RNC_LACRD   (A5VKP2), RNC_LACRJ   (B2G826), RNC_LACS1   (Q1WUA0), 
RNC_LACSS   (Q38XR8), RNC_LEGPA   (Q5X446), RNC_LEGPC   (A5ID21), 
RNC_LEGPH   (Q5ZUD5), RNC_LEGPL   (Q5WVI4), RNC_LEIXX   (Q6AFJ4), 
RNC_LEPBJ   (Q04R64), RNC_LEPBL   (Q053L4), RNC_LEPIC   (Q75FW5), 
RNC_LEPIN   (Q8EXX3), RNC_LEUCK   (B1N016), RNC_LEUMM   (Q03VW5), 
RNC_LISIN   (Q92AK3), RNC_LISMC   (C1KWA4), RNC_LISMF   (Q71YL2), 
RNC_LISMH   (B8DDU8), RNC_LISMO   (Q8Y691), RNC_LISW6   (A0AJR0), 
RNC_MAGSM   (A0L633), RNC_MANSM   (Q65VN5), RNC_MARMS   (A6VUP6), 
RNC_MESFL   (Q6F1N5), RNC_METCA   (Q608M7), RNC_METSB   (B8EK13), 
RNC_MIMIV   (Q5UQT7), RNC_MOOTA   (Q2RJX2), RNC_MOUSE   (Q5HZJ0), 
RNC_MYCBO   (P66667), RNC_MYCCT   (Q2SRZ8), RNC_MYCLE   (O69469), 
RNC_MYCMO   (Q6KHN3), RNC_MYCMS   (Q6MTC9), RNC_MYCPA   (Q73VL8), 
RNC_MYCS2   (A0QV20), RNC_MYCS5   (Q4A589), RNC_MYCTO   (P9WH02), 
RNC_MYCTU   (P9WH03), RNC_MYXXD   (Q1D5X9), RNC_NATTJ   (B2A2N1), 
RNC_NEIG1   (Q5F9X7), RNC_NEIG2   (B4RJT7), RNC_NEIM8   (C9X0M5), 
RNC_NEIMA   (Q9JVD3), RNC_NEIMB   (Q9K0C8), RNC_NITEC   (Q0AF70), 
RNC_NITEU   (Q820I0), RNC_NITOC   (Q3J8D5), RNC_NITSB   (A6Q1H0), 
RNC_NITWN   (Q3SRB3), RNC_NOCFA   (Q5YS08), RNC_OCEIH   (Q8ER05), 
RNC_OENOB   (Q04GL2), RNC_ONYPE   (Q6YPW7), RNC_PANAM   (D4GKM1), 
RNC_PARUW   (Q6MEK1), RNC_PASMU   (P57805), RNC_PECAS   (Q6D219), 
RNC_PECCP   (C6DC00), RNC_PEDPA   (Q03FX0), RNC_PELCD   (Q3A4Q8), 
RNC_PELLD   (Q3B6L3), RNC_PELTS   (A5D1H6), RNC_PELUB   (Q4FLS9), 
RNC_PHEZH   (B4RCU4), RNC_PHOLL   (Q7N1X5), RNC_PHOPR   (Q6LMS2), 
RNC_PHYMT   (B3R075), RNC_PROMA   (G3XCR8), RNC_PROMH   (B4F047), 
RNC_PSE14   (Q48EV3), RNC_PSEA7   (A6VAK6), RNC_PSEA8   (B7UYX2), 
RNC_PSEAB   (Q02HS2), RNC_PSEAE   (Q9XCX9), RNC_PSEE4   (Q1I5V8), 
RNC_PSEF5   (Q4KHT1), RNC_PSEFS   (C3K6Y7), RNC_PSEHT   (Q3IDL2), 
RNC_PSEMY   (A4XSC4), RNC_PSEP1   (A5W8F2), RNC_PSEPF   (Q3KHL9), 
RNC_PSEPG   (B0KV27), RNC_PSEPK   (Q88MY5), RNC_PSEPW   (B1J4E0), 
RNC_PSESM   (Q87XG1), RNC_PSEU2   (Q4ZPE1), RNC_PSYA2   (Q4FUV6), 
RNC_PSYIN   (A1SSM8), RNC_RALME   (Q1LKN1), RNC_RALPJ   (B2U981), 
RNC_RALSO   (Q8Y0I1), RNC_RHIE6   (B3PUN8), RNC_RHIEC   (Q2KAE3), 
RNC_RHIL3   (Q1MJ54), RNC_RHILO   (Q985A6), RNC_RHILW   (B5ZW73), 
RNC_RHIME   (Q92R47), RNC_RHISN   (C3M8S4), RNC_RHOBA   (Q7UGZ7), 
RNC_RHOCA   (Q52698), RNC_RHOFT   (Q21XN1), RNC_RHOPA   (Q6N6C1), 
RNC_RHOS1   (A3PGF8), RNC_RHOS4   (Q3J5W1), RNC_RHOS5   (A4WVP5), 
RNC_RHOSK   (B9KSA7), RNC_RICAE   (C3PMF3), RNC_RICAH   (A8GM79), 
RNC_RICB8   (A8GYE2), RNC_RICBR   (Q1RHA2), RNC_RICCK   (A8EXI3), 
RNC_RICCN   (Q92JB0), RNC_RICFE   (Q4UKA8), RNC_RICM5   (A8F0M2), 
RNC_RICPR   (Q9ZE31), RNC_RICPU   (C4K1R3), RNC_RICRO   (B0BW84), 
RNC_RICRS   (A8GQT8), RNC_RICTY   (Q68XY5), RNC_ROSCS   (A7NGC5), 
RNC_ROSDO   (Q16AI6), RNC_ROSHA   (G2SYN4), RNC_ROSS1   (A5V230), 
RNC_RUEPO   (Q5LNK5), RNC_SALCH   (Q57LD0), RNC_SALEP   (B5QTU8), 
RNC_SALG2   (B5RD49), RNC_SALPA   (Q5PIG5), RNC_SALPK   (B5BAT0), 
RNC_SALTI   (Q8Z4K4), RNC_SALTY   (Q56056), RNC_SERP5   (A8GI25), 
RNC_SHEAM   (A1S3Y1), RNC_SHEB2   (B8EBQ2), RNC_SHEB5   (A3D1V6), 
RNC_SHEB8   (A6WKQ7), RNC_SHEB9   (A9L5N6), RNC_SHEDO   (Q12KI1), 
RNC_SHEFN   (Q07YZ6), RNC_SHEHH   (B0TIV7), RNC_SHELP   (A3QBS7), 
RNC_SHEON   (Q8EH81), RNC_SHEPA   (A8H1C7), RNC_SHEPC   (A4Y4K4), 
RNC_SHEPW   (B8CQJ5), RNC_SHESA   (A0KZN2), RNC_SHESH   (A8FSD6), 
RNC_SHESM   (Q0HG98), RNC_SHESR   (Q0HSJ1), RNC_SHESW   (A1RMC7), 
RNC_SHEWM   (B1KI57), RNC_SHIB3   (B2TXY0), RNC_SHIBS   (Q31XS0), 
RNC_SHIDS   (Q32CV4), RNC_SHIF8   (Q0T1T8), RNC_SHIFL   (P0A7Y3), 
RNC_SHISS   (Q3YYU9), RNC_SINMW   (A6U7A8), RNC_SODGM   (Q2NS13), 
RNC_SOLUE   (Q027L3), RNC_SPHAL   (Q1GTU3), RNC_SPICI   (Q53844), 
RNC_STAA1   (A7X1J9), RNC_STAA2   (A6U152), RNC_STAA3   (Q2FHK5), 
RNC_STAA8   (Q2FZ50), RNC_STAA9   (A5ISB8), RNC_STAAB   (Q2YXI3), 
RNC_STAAC   (Q5HGJ9), RNC_STAAE   (A6QGD3), RNC_STAAM   (Q931T1), 
RNC_STAAN   (P66668), RNC_STAAR   (Q6GHK2), RNC_STAAS   (Q6G9Y0), 
RNC_STAAT   (A8Z3R9), RNC_STAAW   (P66669), RNC_STACT   (B9DPJ2), 
RNC_STAEQ   (Q5HPV8), RNC_STAES   (Q8CPI1), RNC_STAHJ   (Q4L5T5), 
RNC_STAS1   (Q49X17), RNC_STRA1   (Q3K1Y2), RNC_STRA3   (Q8E680), 
RNC_STRA5   (Q8E0K7), RNC_STRAW   (Q82JT9), RNC_STRCO   (Q9ZBQ7), 
RNC_STRE4   (C0M8Y3), RNC_STRGC   (A8AWC2), RNC_STRMU   (Q8DT66), 
RNC_STRP1   (P66670), RNC_STRP2   (Q04K72), RNC_STRP3   (P0DF14), 
RNC_STRP4   (B5E4Y2), RNC_STRP6   (Q5XDA6), RNC_STRP7   (C1C7M6), 
RNC_STRP8   (P66672), RNC_STRPB   (Q1JCZ9), RNC_STRPC   (Q1JMX4), 
RNC_STRPD   (Q1JI19), RNC_STRPF   (Q1J7V3), RNC_STRPG   (A2RFW8), 
RNC_STRPI   (B1IC43), RNC_STRPJ   (B8ZJR8), RNC_STRPM   (Q48UR6), 
RNC_STRPN   (Q97QG6), RNC_STRPQ   (P0DF15), RNC_STRPS   (B2IPN5), 
RNC_STRPZ   (B5XKB7), RNC_STRR6   (Q8DPJ8), RNC_STRS7   (C0MCR4), 
RNC_STRSV   (A3CP46), RNC_STRT1   (Q5LZ68), RNC_STRT2   (Q5M3S3), 
RNC_STRTD   (Q03K17), RNC_STRU0   (B9DRH1), RNC_STRZJ   (C1CEK4), 
RNC_STRZP   (C1CKY7), RNC_STRZT   (C1CR56), RNC_SULNB   (A6QCJ0), 
RNC_SYMTH   (Q67PF5), RNC_SYNFM   (A0LGM1), RNC_SYNWW   (Q0AYW0), 
RNC_THEFY   (Q47S78), RNC_THELT   (A8F397), RNC_THEMA   (Q9X0I6), 
RNC_THENN   (B9K9K8), RNC_THEP1   (A5IN74), RNC_THESQ   (B1LCY9), 
RNC_THIDA   (Q3SH50), RNC_TREDE   (Q73NX5), RNC_TREPA   (O83787), 
RNC_TREPS   (B2S448), RNC_TRES6   (F2NV13), RNC_TROW8   (Q83I82), 
RNC_TROWT   (Q83FY2), RNC_UREPA   (Q9PQT8), RNC_VARPS   (C5CSF5), 
RNC_VEREI   (A1WMW1), RNC_VIBC3   (A5F5H8), RNC_VIBCB   (A7MZA8), 
RNC_VIBCH   (Q9KPB2), RNC_VIBCM   (C3LR04), RNC_VIBF1   (Q5E314), 
RNC_VIBPA   (Q87LN9), RNC_VIBSL   (B7VK79), RNC_VIBVU   (Q8DC76), 
RNC_VIBVY   (Q7MHN8), RNC_WIGBR   (Q8D305), RNC_WOLPM   (Q73FT3), 
RNC_WOLPP   (B3CMS0), RNC_WOLSU   (Q7M840), RNC_WOLTR   (Q5GTI3), 
RNC_WOLWR   (C0R4Q8), RNC_XANAC   (Q8PMV0), RNC_XANC5   (Q3BVV6), 
RNC_XANC8   (Q4USF7), RNC_XANCP   (Q8PB52), RNC_XANOR   (Q5H1R2), 
RNC_XYLF2   (B2I604), RNC_XYLFA   (Q9PB98), RNC_XYLFM   (B0U3D8), 
RNC_XYLFT   (Q87C06), RNC_YERE8   (A1JKK3), RNC_YERP3   (A7FFT9), 
RNC_YERPA   (Q1C555), RNC_YERPE   (Q8ZD72), RNC_YERPG   (A9R402), 
RNC_YERPN   (Q1CKE4), RNC_YERPP   (A4TKX8), RNC_YERPS   (Q667V1), 
RNC_ZUNPS   (D5BDP9), RNC_ZYMMO   (Q9Z5U2), RNT1_YEAST  (Q02555), 
RTL1_ARATH  (Q9M8N2), RTL2_ARATH  (Q9LTQ0), RTL2_ORYSJ  (Q6ATG6), 
RTL3_ARATH  (Q9FKF0), RTL3_ORYSJ  (Q69KJ0), SON_HUMAN   (P18583), 
SON_MOUSE   (Q9QX47), STAU1_AILME (D2GVP7), STAU1_HUMAN (O95793), 
STAU1_MOUSE (Q9Z108), STAU2_DANRE (Q7ZW47), STAU2_HUMAN (Q9NUL3), 
STAU2_MOUSE (Q8CJ67), STAU2_RAT   (Q68SB1), STAU2_XENTR (Q5M7M7), 
STAU_DROME  (P25159), STRBP_BOVIN (Q08E27), STRBP_CHICK (Q5ZIL4), 
STRBP_HUMAN (Q96SI9), STRBP_MOUSE (Q91WM1), STRBP_PONAB (Q5R6Y5), 
STRBP_RAT   (Q9JKU6), STRBP_XENLA (Q6DCD0), TRBP2_BOVIN (Q0IIG6), 
TRBP2_DANRE (Q7SXR1), TRBP2_HUMAN (Q15633), TRBP2_MOUSE (P97473), 
TRBP2_RAT   (Q3SWU0), TRBP2_TETNG (Q4SS66), TRBP2_XENLA (Q6GPZ1), 
TRBP2_XENTR (Q5BJ52), YOT2_CAEEL  (P34648)
» More

UniProtKB/Swiss-Prot
False negative sequences
32 sequences

DCL1_ASPCL  (A1CBC9), DCL1_ASPFU  (Q4WVE3), DCL1_ASPNC  (A2RAF3), 
DCL1_ASPOR  (Q2U6C4), DCL1_ASPTN  (Q0CW42), DCL1_COCIM  (Q1DKI1), 
DCL1_CRYPA  (Q2VF19), DCL1_MAGO7  (A4RKC3), DCL1_NEOFI  (A1DE13), 
DCL1_NEUCR  (Q7S8J7), DCL1_PHANO  (Q0UI93), DCL2_PHANO  (Q0UL22), 
DCL3A_ORYSJ (Q5N870), DCL3B_ORYSJ (Q7XD96), DHX30_BOVIN (Q2NKY8), 
DHX30_CHICK (Q5ZI74), DHX30_HUMAN (Q7L2E3), DHX30_MOUSE (Q99PU8), 
DHX30_PONAB (Q5R607), DHX30_RAT   (Q5BJS0), DUS2L_HUMAN (Q9NX74), 
DUS2L_MOUSE (Q9D7B1), HEN1_ARATH  (Q9C5Q8), NS3B_BC133  (P0C530), 
NS3B_BCHK4  (A3EX96), NS3B_BCHK5  (A3EXD2), RM03_SCHPO  (O43042), 
RM44_BOVIN  (Q2KIS2), RNC_IIV3    (Q196V9), RNC_MYCGA   (Q7NAZ2), 
RNC_MYCGF   (D3FI09), RNC_MYCGH   (D3FH24)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

DNPEP_BOVIN (Q2HJH1)

		
PDB
[Detailed view]
58 PDB

1DI2; 1EKZ; 1O0W; 1QU6; 1RC7; 1STU; 1T4L; 1T4N; 1T4O; 1UHZ; 1UIL; 1VW4; 1WHQ; 1X47; 1X48; 1X49; 1YYK; 1YYO; 1YYW; 1YZ9; 2B7T; 2B7V; 2CPN; 2DIX; 2DMY; 2EZ6; 2KHX; 2L2K; 2L2M; 2L2N; 2L33; 2L3C; 2L3J; 2LBS; 2LJH; 2LRS; 2LUP; 2LUQ; 2MDR; 2NUE; 2NUF; 2NUG; 2RS6; 2RS7; 2YT4; 3ADG; 3ADI; 3ADJ; 3ADL; 3C4B; 3C4T; 3LLH; 3P1X; 3VYX; 3VYY; 4M2Z; 4M30; 4OOG
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission