Entry: PS50871

General information about the entry

Entry name [info] C1Q
Accession [info] PS50871
Entry type [info] MATRIX
Date [info] OCT-2004 (CREATED); MAR-2013 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00857

Name and characterization of the entry

Description [info] C1q domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=138;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=138;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.7161536; R2=0.0081032; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=714; N_SCORE=8.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=467; N_SCORE=6.5; MODE=1; TEXT='RR';
/DEFAULT: M0=-32; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='P'; M=  19,  21, -62,   3,   1, -65, -62, -65,  21, -34, -62, -60,  63, -56,   0,  29,   7, -26, -70,  24;
/M: SY='P'; M=  17,  12, -11, -17, -67,   2, -61, -25,  14, -67, -61, -59,  53,  40,  10, -18, -11,   2, -71,  30;
/M: SY='R'; M= -12, -74, -62,   5, -71,  -6, -62, -57, -10, -31,  10, -58,  36,  40,  43,  27, -11,  28, -78, -66;
/M: SY='P'; M= -18, -77, -66, -16,  -7, -69,  24, -19, -62, -13,  19, -65,  84,  26, -67,  18, -56,  22, -75,  -5;
/M: SY='R'; M= -64, -80,  12,   7, -69, -73,  25, -68,  46, -25,  24, -55,  14,  37,  64, -59, -61, -25, -74,   6;
/M: SY='S'; M=  13, -67, -65,   4, -64, -64, -70,  20, -63, -55, -54, -60,  -6, -59, -68,  65, -46,  58, -82, -65;
/M: SY='A'; M=  92, -62, -67, -61, -75,   1, -70, -64, -63, -67, -61, -61, -67, -60, -68,  -5, -52, -16, -76, -71;
/M: SY='F'; M= -76, -71, -88, -84, 122, -83, -68, -49, -79, -40, -51, -77, -86, -90, -76, -74, -67, -54, -40, -19;
/M: SY='S'; M= -21, -67, -59, -60,   4, -58,  64, -67, -59, -66,   7, -49, -67, -53, -61,  81,  36, -63, -72,  39;
/M: SY='A'; M=  71,  68, -74, -68, -66, -62, -76, -44, -68, -55, -54, -68, -73, -68, -72, -51, -53,  60, -83, -69;
/M: SY='G'; M=  14, -71, -61,  -6, -73,  45, -64, -21,  18, -37, -63, -53, -67, -54,  34,  31,  28, -22, -77, -68;
/M: SY='L'; M= -67, -74, -75, -67,  27, -27,  26, -17, -55,  62,  12, -69, -80, -60,  61, -70, -64, -50, -69, -50;
/M: SY='T'; M= -21, -68, -56, -18, -16, -62, -60, -69,  32, -71, -64,  -5,  -4,   4,   9,  56,  67, -62, -79, -64;
/M: SY='H'; M= -59, -75, -11,  18, -72,  11,  52, -21,  21, -29, -61,  -3, -10,   8,  42,  -9,  35, -25, -81, -62;
/M: SY='Q'; M=   0, -75,  11, -52, -78,  16,  39, -75,  -8, -37, -65,  39,  47,  48, -12,  35, -54, -73, -81, -66;
/M: SY='V'; M= -61, -72, -72, -66,  11, -78,  42,  -2, -61,  25,  26, -66,   0,   1,  24, -21,   5,  44, -71,  23;
/M: SY='P'; M=  11, -74, -59,  28,  -4, -66,  18,   2, -18, -65, -60, -59,  66,  21, -62,  29,  15,  -2, -77, -64;
/M: SY='P'; M=  30, -73, -63,   5,   9,  -2, -66, -56, -60, -30, -60,  22,  71, -61, -14, -11, -55,  29, -77, -66;
/I:         I=-26; MD=-67;
/M: SY='D'; M= -28, -97,  34, -75, -96, -22, -83, -27, -80, -30, -86,  -4,  29, -79, -20,  20, -75, -87,-106, -92; D=-26;
/I:         I=-26; MI=0; MD=-67; IM=0; DM=-67;
/M: SY='P'; M=  -1, -92,  -7, -23, -85,  -7, -72, -84, -64, -31, -75, -72,  57,  35,  25, -23, -72, -83, -85,   3; D=-26;
/I:         I=-26; DM=-67;
/M: SY='N'; M= -61, -74,  49,  -4,  -5,   3,  10,  -1, -57, -15, -62,  57,  28, -56, -19,  15,  -5, -65, -79,   1;
/M: SY='Q'; M= -57, -74, -57,  26,  13,  21, -56, -61, -54, -15,  17,  -4, -68,  72, -58,   6,  23,  -8, -68,  23;
/M: SY='P'; M= -61, -78, -67, -60, -66, -27, -66,  -7, -62, -27, -58, -65,  94,  21, -70, -57,  44,  17, -74,  22;
/M: SY='I'; M= -15, -71, -84, -79, -50, -84, -79,  74, -76,  25,  37, -77, -76, -73, -77, -70, -56,  54, -77, -57;
/M: SY='P'; M= -27, -77, -68, -59, -63, -74,  24,   1,  41,   1, -53, -65,  68, -58,  25, -63, -58,  34, -74,   7;
/M: SY='F'; M= -72, -71, -78,   0, 116, -81, -67, -51, -73, -43, -52, -72, -81, -80, -73, -69,   7, -55, -44, -23;
/M: SY='D'; M=  -5, -73,  88, -43, -79, -20, -55, -71, -17, -76, -72,  63, -68, -55, -61, -15,   7,  -6, -94, -70;
/M: SY='K'; M= -21, -75,  22,  31, -75, -69,  13, -73,  66, -27, -63, -49, -64,   9,  28, -16,  33, -68, -79, -64;
/M: SY='V'; M= -23, -69, -72,   5, -58,  20, -77,  28, -70,   4, -46, -69, -73, -69, -74, -61,   6,  73, -81, -63;
/M: SY='L'; M=  -6, -70, -74, -21,  40, -75, -64,   8, -67,  57, -41, -71, -77, -65,  -4,  21, -58, -14, -64,  23;
/M: SY='Y'; M= -60, -69, -71, -72,  48, -76,   8,   5, -68,  -4, -48,   0, -75, -69, -70, -23,  44,  48, -61,  59;
/M: SY='N'; M= -63, -68, -38, -58, -72, -53,  37, -72, -50, -15, -64, 119, -74, -51, -57, -47, -49, -75, -94, -67;
/M: SY='R'; M= -63, -78,  39,  18, -61, -30, -59,  35, -51,   9,  11, -57,  -3,  21,  43,  -8, -14, -53, -74,  14;
/M: SY='G'; M= -54, -78, -58,   4, -15,  81, -60, -82, -58, -77, -68,  -4, -68,  69, -62, -50, -65, -79, -69,   5;
/M: SY='N'; M= -12, -73,  35,   9, -80,  44, -56, -80, -54, -81, -72,  68,  16,   0, -14,  27, -53, -76, -84, -72;
/M: SY='H'; M= -14, -74,  36, -56, -12,  22, 103, -69, -61, -68, -61,  -2, -69, -55, -62,  21,  -6,   1, -83,   6;
/M: SY='Y'; M= -72, -77, -77, -76,  63, -80, -48, -50, -70,  22, -46, -75, -84, -68, -67, -70, -66, -56,  37, 112;
/M: SY='D'; M= -65, -75,  84,  -8,   7, -60,  26, -78, -15, -78, -72,  79, -69,   1, -57, -20, -54, -78, -90, -62;
/M: SY='P'; M= -26, -77, -69, -18, -63, -30, -68, -49, -66,  35,  17,  -9,  91, -65, -72, -63, -10,  16, -78, -68;
/M: SY='T'; M=  34, -68,   1,  20,  -6, -63, -60, -65, -50, -66,   7,  -4, -65,   8,  30,  24,  54, -26, -79, -63;
/M: SY='T'; M= -22, -63, -59, -60, -66, -65,  33, -59, -59,  -8, -57, -48, -62, -59, -65,  32, 100, -53, -86, -62;
/M: SY='G'; M= -49, -76, -63, -74, -82, 100, -69, -89, -68, -86, -75,  -7, -68, -66, -76,  -8, -65, -83, -75, -77;
/M: SY='K'; M= -62, -77, -63, -51, -64, -75, -60,   8,  75, -61, -56, -57, -70,  22,  48, -60, -58,  33, -70,  21;
/M: SY='F'; M= -75, -72, -87, -83, 119, -83, -65, -49, -78, -41, -51, -76, -86, -87, -75, -74, -67, -54, -39,  32;
/M: SY='T'; M= -57, -68, -59, -62, -63, -26, -61,   0, -51, -32, -56,  43, -68, -57,  45, -47,  80,  10, -80,   6;
/M: SY='C'; M=  61, 125, -75, -71, -71, -64, -76,  -8, -71, -64, -62, -66, -79, -72, -76, -54, -57, -22, -87, -75;
/M: SY='P'; M= -27, -78, -61, -54, -74, -64,   9, -69,   7, -75, -65, -11,  92,  23, -15,  36,   7, -26, -76,   5;
/M: SY='V'; M= -59, -72, -69,  31, -10, -83, -67,  30, -64,  -4, -45, -73, -75, -63,  -9, -66, -56,  71, -68,  48;
/M: SY='P'; M=  19, -81,  -4,  -4, -79, -65, -64, -71, -10, -24, -66,   0, 101, -58,   5, -18, -57, -71, -79, -75;
/M: SY='G'; M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78;
/M: SY='I'; M= -26, -71, -76, -73,  34, -80, -71,  53, -66,   8, -43, -10, -76, -69,  14, -64,  10,  52, -70,   3;
/M: SY='Y'; M= -72, -81, -71, -74,  16, -78, -38, -56, -66, -52, -50, -72, -84, -62, -63, -66, -66, -61, -27, 132;
/M: SY='Y'; M=  -7, -75, -73, -68,  44, -76,  12,  10, -65,  23, -46, -69, -78,  21, -17, -13, -61, -12, -49,  86;
/M: SY='F'; M= -74, -71, -88, -83, 115, -84, -68,  -6, -79,   9, -47, -77, -85, -86, -76, -74, -66, -50, -44, -22;
/M: SY='S'; M=  27, -64, -60, -59, -71, -21, -64, -13,  -5, -67, -63, -50, -64, -54, -62,  76,  53, -17, -81, -66;
/M: SY='Y'; M=  36, -71, -76, -73,  66, -72, -56, -47, -70, -19, -50, -72, -79, -69, -69, -61, -60,  26, -46,  90;
/M: SY='H'; M= -60, -73,  24, -52, -70, -66, 115, -71, -57, -68, -59,   4, -66,   1, -57,  16,  56, -21, -95, -50;
/M: SY='V'; M=  11, -69, -82, -76, -51, -80, -77,  54, -74,  27,  42, -76, -76, -72, -75, -66, -55,  65, -78, -59;
/M: SY='H'; M= -57,  27, -55,  41, -66, -27,  82, -60, -58,  -6,   9, -53, -66, -53, -61,   7,  60,   3, -87, -58;
/M: SY='V'; M= -56, -70, -69, -64,  11, -22,  14,   7,  32,   2,  13, -61,   1, -61, -60,  23,  19,  47, -76, -57;
/M: SY='W'; M=   5, -75,  11,  -9,  34,  -7,  39, -62,  12,  -7, -57,  -5, -73, -56,  33, -58, -11, -17,  44,  39;
/M: SY='H'; M=   2, -76, -59, -17, -66,  22,  53, -70, -51,  -2, -60,  31,  29,  -3,  42,  11, -59, -70,  38,   7;
/I:         I=-29; MD=-75;
/M: SY='D'; M=   3,  12,  43, -54, -79,  10,  38, -75,   0, -76, -69,   2, -72,   5,  30,   4,  22, -19, -88, -68; D=-29;
/I:         I=-29; MD=-75;
/M: SY='E'; M= -24, -99, -12,  38, -99, -90, -81, -26,   4, -93, -88,  -3,  12, -69, -10, -13, -78, -32,-103, -92; D=-29;
/I:         I=-29; MI=0; MD=-75; IM=0; DM=-75;
/M: SY='H'; M= -26,  15, -13,   9, -70, -66,  58, -11,  30, -70, -63,  33,  53, -53, -55,   6,  34, -66, -79,   8;
/M: SY='V'; M=   7, -68, -77, -73, -53,  -8, -74,  29, -72,  43,  16, -71, -75, -70, -74, -61,  25,  52, -78, -60;
/M: SY='Q'; M= -28,  43, -57,  30, -63, -68, -54, -74,  18, -71, -63, -56, -69,  71,  32,  23, -59, -72,  66,  45;
/M: SY='V'; M=  23, -69, -79, -73,  -7, -14, -75,  28, -72,  29,  25, -74,  15, -71, -75, -63, -56,  57, -76, -59;
/M: SY='R'; M=   1, -72,  12, -59,   3,  20,  18, -59, -16, -27, -60,  22, -72, -56,  43,  27, -55,  24, -75,  -1;
/M: SY='L'; M= -67, -71,   7, -70,  34, -81, -67,  -5, -74,  76, -36, -75,  16, -70, -74, -21, -61, -44, -68, -50;
/M: SY='M'; M= -57,  16, -72, -67, -54,  -7,  25, -45, -58, -47,  94, -63, -73, -58,  33,  22, -56,  38, -71,  40;
/M: SY='K'; M= -29, -75,  11, -51, -70,  -7,  33, -58,  66, -13, -57, -54, -70,   7,  40, -59, -59,  31, -78, -62;
/M: SY='N'; M= -60, -70,   7, -54, -76, -18,  35, -78, -46, -81, -69, 104, -71, -49,  33,  25, -49, -77, -91, -67;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='G'; M= -58, -76,  48,  13, -74,  61,  50, -71, -58, -15, -65,  35, -69, -56, -14, -54, -61,  -5, -84, -66;
/M: SY='Q'; M=  12, -73, -60,  25, -62, -72,  24, -15, -18,  12, -51,  -8, -70,  48,  19, -56,   8,  29, -75,   7;
/M: SY='Q'; M=  -4, -74,  25,  -9, -66, -70, -64,  36,  17, -59, -56, -56,  22,  36, -15,   8,  21,  17, -77,  -7;
/M: SY='C'; M= -59,  68, -68,  -6, -64, -78, -68,   5,  23,  -6, -52, -65,  13,  34,  24, -63, -57,  53, -81, -65;
/M: SY='M'; M=  22, -70, -81, -74,  11, -77, -73,  52, -73,  25,  57, -75,  -7, -70, -74, -65, -57,  44, -73, -55;
/M: SY='Q'; M= -58,  36,  -6,  30, -15, -69,  10,  11, -19, -28,   7, -55, -69,  40,  27,  40,  -8, -20, -75,   1;
/M: SY='T'; M=  16, -66, -66, -64,  36, -22, -66,   9,   2,  -2,   9, -56, -67, -61, -64,  43,  58, -51, -72, -55;
/M: SY='H'; M= -66,  18, -65,  11,  51, -23,  70, -16, -19,  -9,  35, -61, -74, -58,   4, -62,   4, -59, -58,  64;
/M: SY='C'; M=  36,  86,  49, -19, -78,  24, -64, -76, -61, -74, -69, -51, -70,  21, -66,  23,  -5, -67, -85, -72;
/M: SY='Q'; M=  -3, -77,  42,  16, -67,   1,  55, -73, -16, -33, -61,   4, -68,  71, -54, -18, -19, -72, -72,  41;
/M: SY='Y'; M=   1, -74,  33,   7,  28,  22,  36, -65, -57, -16, -60,  23, -71, -57,   8, -17, -10, -18, -68,  40;
/M: SY='Y'; M=  24, -71, -56,  -5, -60,   3, -55, -69,   3, -70, -62,  32,  -2,  24, -57,  30,  32, -65, -65,  60;
/M: SY='D'; M=  12, -74,  59,  -9, -75,  40,  24, -78,  20, -77, -69,  -3, -66, -53,  -5,   5,   9, -72, -79,  -1;
/I:         I=-18; MD=-45;
/M: SY='S'; M= -58, -77, -60, -59, -75,  13, -61, -72,   4, -25, -67,  46,   1,  34,  29,  47, -55, -20,  36, -68; D=-18;
/I:         I=-18; MI=0; MD=-45; IM=0; DM=-45;
/M: SY='C'; M= -71,  53,  15,  48, -13, -80, -67, -83,   3, -81, -76,  14,  -4,  -9, -16, -63,  26, -79, -87,  -2; D=-18;
/I:         I=-18; DM=-45;
/M: SY='Y'; M= -63, -77,   0, -20,  16,   3,  39, -21, -62,  15, -56,  -3,  -8, -61,  11,  28, -60,  -8, -70,  40; D=-18;
/I:         I=-18; DM=-45;
/M: SY='D'; M=  -3, -80,  62,  36,   9,   7, -59, -18, -52, -74, -70,  17, -70,  40,  16, -57, -62, -72, -81, -65; D=-18;
/I:         I=-18; DM=-45;
/M: SY='Q'; M= -16,  28, -64, -59, -63, -68,   9, -50, -59, -23,  38,  -7,   1,  53, -62,  18,  50,  35, -79,   2;
/M: SY='A'; M=  66, -67, -66, -60, -68,   6, -66,   2,   3,   7, -54,  -3, -69,  24, -62, -14, -11, -17, -76, -66;
/M: SY='S'; M= -11, -64, -59, -59, -70, -55, -63,   1, -59, -68, -64, -48, -64, -53, -64,  94,  39, -17, -82, -65;
/M: SY='N'; M= -57, -72, -59, -67,  43,  63, -61, -61, -62, -35, -61,  64, -73,  24, -67, -53, -59,  19, -72, -58;
/M: SY='H'; M= -21, -70,   2, -61,   9,  41,  60, -71, -61, -18, -63,  31, -68, -56, -65,  58,  10, -68, -79, -59;
/M: SY='V'; M=  48, -66, -71,  -8, -60,  -4, -71, -11, -67,  18,  36, -67, -71, -64, -70, -55,   7,  51, -79, -63;
/M: SY='M'; M= -61, -71, -81, -76, -50, -83,  36,  57, -73,  29,  72, -74, -76, -69, -73, -70, -57,  55, -79, -54;
/M: SY='L'; M=  -8, -68, -83, -76,   8, -82, -72,   9, -76,  71,  15, -80, -81, -72, -75, -71, -59,  39, -72, -53;
/M: SY='H'; M= -27, -81,  -8,  36, -63, -71,  80, -73,  17, -26, -59, -54,  34,  51,  14, -58, -62, -73, -70,  47;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='L'; M= -67, -69, -84, -76, -41, -86, -68, -32, -77,  90,  24, -83, -84, -70, -74, -77, -63, -40, -71, -53;
/M: SY='Q'; M= -25, -77, -50,  42,  -5, -68, -53, -74,  12, -70, -62,   8, -65,  91,  28, -19,  21, -71, -74, -61;
/M: SY='Q'; M=  19, -75, -14,  11, -67, -69, -60, -57,  38, -13, -57, -60,  32,  52,  14, -56, -58,  25, -73,  13;
/M: SY='G'; M= -51, -77, -58,  19, -83,  95, -66, -89, -63, -84, -74,  -3, -67,   4, -71, -50, -66, -83, -75, -76;
/M: SY='D'; M= -66, -81, 103,  34, -86, -66,  36, -85, -51, -80, -76, -39, -65,  44, -57, -55, -59, -82, -95, -66;
/M: SY='Q'; M=  -2, -78, -49,  57, -65, -69,  26, -74,  11, -70, -62,  -4, -66,  71,  23, -53, -10, -71, -67,  50;
/M: SY='V'; M= -52, -66, -79, -74, -55, -82, -83,   4, -72, -42, -44, -73, -76, -75, -75, -61,  34,  95, -88, -62;
/M: SY='W'; M= -67,  17, -77,  -9,  -4, -69,  17, -73, -66, -70, -70,  -2, -75, -63, -70,  25, -70, -80, 158,   9;
/M: SY='L'; M= -63, -70, -85, -78,  14, -86, -75,  42, -77,  66, -34, -81, -81, -74, -77, -74, -59,  46, -72, -52;
/M: SY='Q'; M= -22, -77,  -5,  55,  38, -74, -57, -63,  12, -31, -59, -58, -68,  57,  44, -58, -61,   8, -71, -55;
/I:         I=-36; MD=-90;
/M: SY='L'; M=  -5, -71, -79, -72, -55, -79, -75, -12,   9,  52, -43, -74, -79, -69, -69,  -1, -16,  50, -81, -63; D=-36;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='D'; M= -70, -84,  58, -63, -20,  10,  23, -70, -24, -38, -73,  -6, -80, -71, -75, -25,  23,  17, -97, -73; D=-36;
/I:         I=-36; DM=-90;
/M: SY='N'; M= -23, -74,  -6,  33, -72,  20,  10, -65,  10,  -9,  36,  58,  -5,  20, -14, -53, -12, -25, -81, -66;
/M: SY='D'; M=  13, -75,  63,   8, -80,  48,  20, -82, -53, -79, -72,  -7, -67, -53,  28,  19, -57, -75, -83, -69;
/M: SY='W'; M=  -4, -73,   1,  -9, -12,  15,   7, -72,  23, -71, -65,  -5, -67,  22,  -4,  35,  28, -69,  58,  27;
/M: SY='N'; M= -59, -73, -55, -19, -62,  52, -58,  29, -16,  -5, -57,  75, -71, -59, -65, -53, -15, -58, -73,  25;
/M: SY='A'; M=  50, -69,  -8,   4, -74,  46, -66, -67, -60, -27, -64, -56,   7, -58, -14,  18,   6, -13, -78, -71;
/M: SY='H'; M= -26, -75, -71, -65, -58, -74,  60,  45,   0,  28,  44, -64,  49, -61, -65,   2, -14, -18, -78, -57;
/M: SY='Y'; M= -64, -76, -14, -20,  31,   1,  11,   3,  -6,   3, -52, -63,   4, -60,   5, -15,  -7, -17, -54,  79;
/M: SY='S'; M=   8, -70,  -3, -12,   1,  43,  13, -69, -19, -70, -65, -51, -66,  -2, -63,  48,  33, -29, -73,  14;
/M: SY='W'; M= -23, -73,  44, -12,  -1,   9, -62, -13, -63, -13,  10,  17,   7, -60, -68,  30, -55,  22,  45,  12;
/M: SY='P'; M= -59, -78,  -1,  24, -76, -66,  35,   7,  21, -71, -63,  16,  55,  40,   9,  37, -54, -67, -80, -65;
/M: SY='W'; M= -58, -75, -12,  30,  -3,  36,  24, -21, -17, -27, -60,  32, -70,  -2, -62,   2, -58,  15,  46,  29;
/I:         I=-38; MD=-97;
/M: SY='D'; M=  -8, -91,  34, -70, -89, -84, -81, -79,  19, -84,  15, -14, -87, -73, -18, -19,  13,  -6,  27, -82; D=-38;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='Y'; M= -75, -90,  62, -63, -11,  20,  12, -81, -71, -77,  20,  -6, -83,  -7, -75, -69, -73, -83, -72,  66; D=-38;
/I:         I=-38; DM=-97;
/M: SY='S'; M= -45, -65, -58, -60, -69, -55, -63,  17, -59, -67, -63, -47, -64, -53, -64,  94,  47, -55, -82, -65;
/M: SY='T'; M=  -6, -67,  11, -61, -61, -70,  35,  28, -61, -30,   8, -52, -65, -62, -67, -12,  86, -13, -81,  -1;
/M: SY='F'; M= -76, -71, -88, -84, 122, -83, -68, -49, -79, -40, -51, -77, -86, -90, -76, -74, -67, -54, -40, -19;
/M: SY='S'; M= -17, -65, -59, -60, -14,  -2, -61, -67, -59, -69,  34, -47, -64, -52, -63,  93,  29, -62, -79, -63;
/M: SY='G'; M=  -2, -75, -65, -75, -82, 100, -71, -89, -69, -85, -74, -51, -68, -67, -76, -49, -67, -81, -74, -77;
/M: SY='F'; M= -25, -73, -83, -80, 102, -81, -63,  28, -75, -42, -48, -75, -83, -79, -74, -70, -64, -10, -43,  62;
/M: SY='L'; M= -67, -69, -85, -77,   5, -86, -68,  -5, -77,  86,  28, -82, -83, -71, -75, -77, -63, -39, -69, -51;
/M: SY='L'; M= -63, -69, -84, -77, -45, -85, -70,  24, -76,  70,  62, -80, -80, -70, -74, -74, -60,  37, -74, -54;
/M: SY='Y'; M= -26, -76, -71, -72,  70,  20,  26, -60, -14, -55, -54, -65, -79, -65, -64, -20, -64, -63, -41,  99;
/M: SY='P'; M= -23, -81, -64,   8, -74, -27,   5, -66,   1,  10, -61, -65,  84,   6,  -1,  16, -59, -30, -80, -71;
/M: SY='D'; M= -23, -82,  71, -20,  -6, -74, -68, -77, -68, -30,   7,  13, -77, -67, -74,   2,  36, -75, -96, -73;
/M: SY='W'; M= -33,-102, -97, -33, -87,-100, -96, -32, -28, -13,   6, -92,-100, -90, -94,   1,  18, -84,  35,  -8;
/M: SY='E'; M= -39,-117, -25,  20,-118,-109,   6,-111, -31,-113,-108, -95, -16, -90, -98, -20, -30, -41,-126,-108;
/M: SY='P'; M= -37,-119,-104, -32, -26, -38,  16,-108, -33, -40,-100,-102,  16, -99,-103, -29,-101,-109,-111, -14;
/I:         E1=0; IE=-380; DE=-380;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 101 in 99 different sequences
Number of true positive hits 101 in 99 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Feature key [info] DOMAIN
Feature description [info] C1q
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
99 sequences

ADIPL_DANRE (A1A5X5    ), ADIPL_HUMAN (Q5T7M4    ), ADIPL_MOUSE (Q8R2Z0    ), 
ADIPL_XENTR (A4IH36    ), ADIPO_BOVIN (Q3Y5Z3    ), ADIPO_HUMAN (Q15848    ), 
ADIPO_MOUSE (Q60994    ), C1QA_BOVIN  (Q5E9E3    ), C1QA_HUMAN  (P02745    ), 
C1QA_MOUSE  (P98086    ), C1QA_PIG    (Q69DL0    ), C1QA_RAT    (P31720    ), 
C1QB_BOVIN  (Q2KIV9    ), C1QB_HUMAN  (P02746    ), C1QB_MOUSE  (P14106    ), 
C1QB_RAT    (P31721    ), C1QC_HUMAN  (P02747    ), C1QC_MOUSE  (Q02105    ), 
C1QC_RAT    (P31722    ), C1QL2_HUMAN (Q7Z5L3    ), C1QL2_MOUSE (Q8CFR0    ), 
C1QL3_HUMAN (Q5VWW1    ), C1QL3_MOUSE (Q9ESN4    ), C1QL4_HUMAN (Q86Z23    ), 
C1QL4_MOUSE (Q4ZJM9    ), C1QRF_HUMAN (O75973    ), C1QRF_MOUSE (O88992    ), 
C1QT1_HUMAN (Q9BXJ1    ), C1QT1_MOUSE (Q9QXP7    ), C1QT1_RAT   (Q5XIG2    ), 
C1QT2_HUMAN (Q9BXJ5    ), C1QT2_MOUSE (Q9D8U4    ), C1QT3_HUMAN (Q9BXJ4    ), 
C1QT3_MOUSE (Q9ES30    ), C1QT4_HUMAN (Q9BXJ3    ), C1QT4_MOUSE (Q8R066    ), 
C1QT5_HUMAN (Q9BXJ0    ), C1QT5_MOUSE (Q8K479    ), C1QT5_RAT   (Q5FVH0    ), 
C1QT6_HUMAN (Q9BXI9    ), C1QT6_MOUSE (Q6IR41    ), C1QT6_RAT   (Q3T1I2    ), 
C1QT7_HUMAN (Q9BXJ2    ), C1QT7_MOUSE (Q8BVD7    ), C1QT8_HUMAN (P60827    ), 
C1QT9_BOVIN (Q0II24    ), C1QT9_MOUSE (Q4ZJN1    ), C1T9A_HUMAN (P0C862    ), 
C1T9B_HUMAN (B2RNN3    ), CAPR2_DANRE (Q5RJ80    ), CAPR2_HUMAN (Q6IMN6    ), 
CAPR2_MOUSE (Q05A80    ), CBLN1_BOVIN (P86437    ), CBLN1_HUMAN (P23435    ), 
CBLN1_MOUSE (Q9R171    ), CBLN1_PIG   (P63181    ), CBLN1_RAT   (P63182    ), 
CBLN2_HUMAN (Q8IUK8    ), CBLN2_MOUSE (Q8BGU2    ), CBLN2_RAT   (P98087    ), 
CBLN3_BOVIN (Q17QF9    ), CBLN3_HUMAN (Q6UW01    ), CBLN3_MOUSE (Q9JHG0    ), 
CBLN4_HUMAN (Q9NTU7    ), CBLN4_MOUSE (Q8BME9    ), CO8A1_CHICK (Q7LZR2    ), 
CO8A1_HUMAN (P27658    ), CO8A1_MOUSE (Q00780    ), CO8A1_RABIT (P14282    ), 
CO8A2_HUMAN (P25067    ), CO8A2_MOUSE (P25318    ), COAA1_BOVIN (P23206    ), 
COAA1_CHICK (P08125    ), COAA1_HUMAN (Q03692    ), COAA1_MOUSE (Q05306    ), 
COLE_LEPMA  (P98085    ), EMIL1_HUMAN (Q9Y6C2    ), EMIL1_MOUSE (Q99K41    ), 
EMIL2_HUMAN (Q9BXX0    ), EMIL2_MOUSE (Q8K482    ), ENASE_CHICK (P0C7A1    ), 
ERFE_HUMAN  (Q4G0M1    ), ERFE_MOUSE  (Q6PGN1    ), ERFE_RAT    (D4AB34    ), 
HIP_MYTED   (P83425    ), HP20_BOVIN  (Q2KIT0    ), HP20_TAMSI  (Q06575    ), 
HP251_BOVIN (Q2KIX7    ), HP252_BOVIN (Q2KIU3    ), HP25_TAMSI  (Q06576    ), 
HP27_TAMSI  (Q06577    ), MMRN1_HUMAN (Q13201    ), MMRN1_MOUSE (B2RPV6    ), 
MMRN2_HUMAN (Q9H8L6    ), MMRN2_MOUSE (A6H6E2    ), OTO1A_DANRE (A5PN28    ), 
OTOL1_HUMAN (A6NHN0    ), OTOL1_MOUSE (Q4ZJM7    ), OTOL1_ONCKE (P83371    )
» more

PDB
[Detailed view]
26 PDB

1C28; 1C3H; 1GR3; 1O91; 1PK6; 2JG8; 2JG9; 2KA3; 2OII; 2WNU; 2WNV; 4D7Y; 4DOU; 4F3J; 4NN0; 4OUL; 4OUM; 4OUS; 4QPY; 4QQ2; 4QQH; 4QQL; 4QQO; 4QQP; 5HKJ; 5HZF
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