Entry: PS51030

General information about the entry

Entry name [info] NUCLEAR_REC_DBD_2
Accession [info] PS51030
Entry type [info] MATRIX
Date [info] NOV-2004 (CREATED); OCT-2013 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00031
Associated ProRule [info] PRU00407

Name and characterization of the entry

Description [info] Nuclear hormone receptors DNA-binding domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=76;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=71;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4627326; R2=0.0106523; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=4391.6899414; R2=4.6157479; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=567; H_SCORE=7009; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=380; H_SCORE=6146; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-10; D=-20; I=-20; B1=-100; E1=-100; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M:         M= -8, -4,-23, -4, -4,-20,-12,-10,-18, -7,-19,-12,  0, -4, -4,-10,  0, -2,-14,-28,-17, -5;
/M: SY='E'; M= -7, -5,-26, -5,  6,-23,-12, -4,-21,  3,-19,-11, -2,-10,  3, -3,  1, -6,-15,-27,-16,  5;
/M:         M= -7,-12,-19,-14, -8,-16,-21,-10, -9, -3, -7, -5, -7,-11, -6, -8, -6, -5, -7,-27,-13, -8;
/M: SY='C'; M=  0,-30, 90,-30,-40,-20,-30,-30,-10,-30,-10,-10,-30,-30,-30,-30,-10,-10,-10,-20,-20,-30;
/M: SY='A'; M=  5,-14,-15,-14, -4,-19,-17,-15, -9, -2, -6, -1,-12,-13,  1, -6,  0, -2, -3,-26,-16, -3;
/M: SY='V'; M= -3,-30,-10,-30,-23, -7,-32,-30, 32,-23, 13,  9,-30,-23,-23,-30,-20, -3, 36,-30,-10,-23;
/M: SY='C'; M=  0,-30, 90,-30,-40,-20,-30,-30,-10,-30,-10,-10,-30,-30,-30,-30,-10,-10,-10,-20,-20,-30;
/I:         I=-6; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='G'; M= -3, -4,-25, -3, -7,-24, 21, -9,-31,-10,-30,-21,  2,-16, -8,-12,  4,-11,-25,-24,-21, -8;
/M: SY='D'; M= -9, 11,-26, 15,  7,-27, -9, -8,-26,  1,-27,-18,  6,-13,  2, -1,  0, -6,-22,-33,-22,  4;
/I:         I=-6; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='P'; M= -7, -9,-25, -8, -2,-26,-14,-11,-22,  2,-20,-13, -6,  7, -2, -3, -2, -6,-17,-30,-20, -2;
/M: SY='A'; M= 18,-14, -8,-14, -9,-20, -3,-16,-13, -7,-14,-11, -9, -9, -9,-11, 10,  1, -6,-28,-18, -9;
/I:         I=-6; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='S'; M=  1, -5,-11, -6, -8,-14,-12, -5,-14,-11,-15,-11,  1,-16, -9,-13,  8,  5,-11,-25,-12, -8;
/M: SY='G'; M= -2, -8,-22, -9,-10,-27, 26,-15,-31,-10,-29,-21,  0,-18,-10,-11,  2,-11,-23,-23,-24,-10;
/M: SY='Y'; M=-12,-16,-20,-19,-11, -1,-24, -4,-10, -3, -6, -4,-10,-22, -6, -6, -8,-11,-10,-15,  5,-11;
/I:         I=-6; MI=0; MD=-29; IM=0; DM=-29;
/M: SY='H'; M=-19,  4,-30, -8,  0,-14,-17, 28,-29, -5,-28,-19, 17,-20,  1,  3, -7,-16,-29,-23, 11,  0;
/M: SY='Y'; M=-20,-29,-20,-30,-22, 35,-29, 12, -8,-22, -8, -8,-22,-32,-15,-22,-20,-20,-10, 16, 57,-22;
/M: SY='G'; M= -1, -5,-29, -5,-16,-29, 50,-18,-37,-18,-38,-28,  3,-19,-17,-18,  2,-17,-29,-23,-29,-16;
/M: SY='V'; M=  9,-25, -8,-25,-18,-11,-18,-25, 12,-17,  1,  1,-24,-18,-17,-22,-10, -1, 20,-28,-13,-17;
/M: SY='L'; M= -7,-21,-17,-20,-15, -8,-26,-15,  0,-14,  1,  1,-17,-12,-12,-16,-10, -7, -1,-22,-10,-14;
/M: SY='S'; M= 14,-12, -2,-12, -9,-18, -9,-17,-10, -8,-10, -7, -6,-13, -8,-13, 18, 10, -6,-28,-19, -9;
/I:         I=-6; MI=0; MD=-29; IM=0; DM=-29;
/M: SY='C'; M=  0,-30, 90,-30,-40,-20,-30,-30,-10,-30,-10,-10,-30,-30,-30,-30,-10,-10,-10,-20,-20,-30;
/M: SY='N'; M=-12,  2,-25, -2,  0,-18,-12, -1,-22, -1,-20,-13, 11,-18, -2, -1,  0, -7,-21,-27,-12, -2;
/M: SY='G'; M= 18,-14,-16,-14,-14,-25, 29,-19,-25,-14,-25,-20, -8,-15,-14,-14,  6, -9,-16,-25,-25,-14;
/M: SY='C'; M=  0,-30, 90,-30,-40,-20,-30,-30,-10,-30,-10,-10,-30,-30,-30,-30,-10,-10,-10,-20,-20,-30;
/M: SY='K'; M= -1, -4,-18,-11,  2,-26,-16,-13,-22, 27,-17,-10, -3,-12,  2,  7,  4, -5,-15,-30,-20,  2;
/M: SY='A'; M=  8,-18,-12,-18,-15,-17,  1,-20, -9,-13, -9, -1,-11,-16,-10,-14,  3, -1, -4,-23,-19,-13;
/M: SY='F'; M=-20,-30,-20,-30,-30, 60,-30,-10,  0,-30,  0,  0,-30,-40,-30,-30,-20,-20,-10, 10, 30,-30;
/M: SY='F'; M=-20,-30,-20,-30,-30, 60,-30,-10,  0,-30,  0,  0,-30,-40,-30,-30,-20,-20,-10, 10, 30,-30;
/M: SY='R'; M= -9, -9,-29,-19,  0,-29,-19, -1,-30, 21,-20,-10,  0,-19,  9, 44, -8,-10,-29,-29,-19,  0;
/M: SY='R'; M=-10, -9,-30,-19,  1,-30,-20,  0,-30, 20,-20,-10,  1,-20, 10, 48, -9,-10,-30,-30,-20,  1;
/M: SY='T'; M=  5,-13, -8,-14,-10,-17,-15,-18, -6, -9, -7, -3, -5,-13, -9,-12,  9, 21,  0,-24,-17,-10;
/M: SY='V'; M= -5,-29,-11,-29,-22, -4,-32,-25, 22,-20, 12,  9,-26,-24,-20,-25,-17, -4, 24,-24, -7,-21;
/M: SY='M'; M= -5,-21,-14,-22,-14,-10,-26,-15,  1,-11,  1,  2,-16,-21, -9,-10, -9, -2,  2,-19,-10,-13;
/M: SY='N'; M= -7, -2,-24, -4,  2,-22,-10, -8,-19,  2,-16, -8,  5,-15,  1, -3,  3, -4,-16,-28,-18,  1;
/M: SY='K'; M=-12,  7,-29, -2,  5,-28, -8, -3,-30, 19,-25,-15, 15,-14,  4,  9,  2, -7,-24,-29,-19,  4;
/M: SY='K'; M= -8,-13,-21,-18, -6,-16,-23, -9,-12,  6, -5, -2, -7,-18,  0,  5, -5, -6,-11,-24,-10, -6;
/I:         I=-6; MI=0; MD=-29; IM=0; DM=-29;
/M: SY='K'; M= -9, -3,-22, -7,  0,-19,-16, -6,-17,  3,-16, -9,  2,-16,  1,  0,  0, -1,-13,-26,-13,  0;
/M: SY='Y'; M=-17,-27,-20,-27,-20, 24,-28,  7, -7,-19, -7, -7,-20,-27,-14,-20,-17,-17, -9,  8, 44,-20;
/M: SY='K'; M= -3, -9,-18,-11, -2,-19,-18,-10,-13,  2,-13, -7, -5,-14, -2, -3, -1,  2, -7,-26,-14, -2;
/M: SY='C'; M=  1,-29, 85,-29,-38,-20,-29,-29,-10,-29,-10,-10,-29,-29,-29,-29, -9,-10,-10,-21,-20,-29;
/M: SY='K'; M= -8,-10,-24,-15, -2,-21,-19, -8,-19, 12,-14, -6, -4,-14,  4, 11, -2, -7,-17,-24,-14, -1;
/M:         M= -7,-11,-20,-15, -8, -7,-12, -4,-19,  0,-15, -9, -6,-21, -5,  0, -5,-11,-17,-18, -4, -7;
/M: SY='N'; M=-11,  8,-27,  5,  2,-24, -1, -4,-27, -2,-26,-16, 15,-17, -1, -6,  4, -6,-24,-25,-19,  0;
/M: SY='N'; M=-10,  6,-30,  0,  0,-29,  8, -7,-32,  3,-30,-20, 15,-13, -1, -2,  2, -9,-26,-28,-23, -1;
/M: SY='N'; M=-13, 10,-28,  6,  5,-24,-11, -1,-25,  4,-24,-14, 16,-14,  4,  0,  2, -5,-22,-31,-18,  4;
/I:         I=-5; MI=0; MD=-25; IM=0; DM=-25;
/M: SY='C'; M= -1,-30, 86,-30,-40,-17,-30,-29,-10,-30,-10,-10,-30,-30,-30,-30,-10,-10,-10,-19,-18,-30;
/M:         M= -9,-11,-22, -9, -2,-12,-22,-10,-10, -8,-11, -8, -9,-12, -5,-12, -6, -5, -7,-23, -7, -4;
/I:         I=-3; MD=-13;
/M: SY='I'; M= -7,-19,-15,-18,-14, -9,-29,-22, 16,-17,  6,  4,-19,-22,-16,-21,-13, -4, 16,-28,-13,-15; D=-3;
/I:         I=-3; MI=0; MD=-13; IM=0; DM=-13;
/M: SY='N'; M= -9, 11,-19, 12,  3,-23, -9, -7,-21, -5,-24,-16, 13,-15, -3,-10,  6,  1,-19,-31,-21,  0; D=-3;
/I:         I=-3; DM=-13;
/M: SY='K'; M= -7, -6,-20,-11, -1,-18,-17, -6,-19, 13,-16, -9, -3,-14,  0,  2,  0, -4,-14,-24,-11, -1; D=-3;
/I:         I=-3; DM=-13;
/M:         M= -6, -5,-22, -5, -2,-17,-12, -6,-16, -5,-17,-11, -2,-10, -4, -9,  0, -4,-12,-25,-12, -3; D=-3;
/I:         I=-3; DM=-13;
/M:         M= -6, -9,-20,-11, -8,-11, -9, -7,-14, -7,-14, -8, -3,-17, -6, -9,  0, -3,-12,-20, -9, -8; D=-3;
/I:         I=-3; DM=-13;
/M: SY='R'; M= -9, -9,-26,-16, -1,-26,-18, -1,-23, 13,-17, -9, -1,-15,  5, 27, -7, -7,-21,-28,-16, -1; D=-3;
/I:         I=-3; DM=-13;
/M: SY='N'; M= -9, -7,-10,-12,-11,-19,-17, -7,-16, -6,-16,-10,  4,-11, -7, -6, -3, -4,-14,-28,-13, -9;
/M: SY='K'; M= -3,-14,-18,-18, -8,-12,-19,-12,-11,  2, -8, -4, -8,-17, -4,  0, -4, -5, -8,-23,-10, -7;
/M: SY='C'; M=  0,-29, 84,-29,-38,-20,-30,-29,-11,-26,-10,-10,-29,-29,-28,-28,-10,-10,-10,-20,-20,-28;
/M: SY='R'; M= -9, -6,-29,-14,  5,-30,-20, -3,-30, 22,-20, -8,  0,-14, 17, 34, -5, -9,-26,-28,-18,  7;
/M: SY='A'; M=  4,-15,-14,-16, -8, -7, -9, -1,-17, -6,-15,-11,-10,-17, -6,-10,  2, -8,-13,-16,  4, -8;
/M: SY='C'; M= -1,-30, 85,-30,-40,-19,-30,-30,-11,-30,-10,-10,-30,-30,-40,-30,-11,-10,-11,-14,-18,-30;
/M: SY='R'; M=-10,-11,-29,-20, -1,-29,-21, -1,-27, 18,-18, -9, -1,-20,  8, 46,-10,-10,-27,-30,-20, -1;
/M: SY='F'; M=-17,-31,-18,-31,-25, 33,-32, -8,  1,-23,  6,  4,-26,-33,-18,-23,-19,-17, -6,  5, 26,-24;
/M: SY='Q'; M= -8,  0,-27, -3, 11,-26,-18, -3,-25, 15,-19, -8,  1,-13, 16,  9,  0, -7,-18,-27,-16, 12;
/M: SY='K'; M=-10, -1,-30,-10,  9,-29,-20, -8,-29, 41,-19, -9,  1,-12, 12, 20, -1,-10,-20,-29,-19, 10;
/M: SY='C'; M=  0,-29, 85,-29,-38,-20,-29,-39,-10,-29,-10,-10,-28,-29,-29,-29, -8, -9,-10,-20,-20,-29;
/M: SY='L'; M= -9,-33,-13,-33,-26,  2,-32,-23, 17,-22, 21, 11,-27,-28,-21,-23,-19,-10, 12,-19, -3,-26;
/M: SY='E'; M= -7,  2,-27,  2, 13,-25,-17, -5,-23, 10,-20,-11,  1,-14, 10,  4,  0, -7,-18,-29,-18, 11;
/I:         I=-6; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='V'; M=  4,-24,-11,-24,-14,-11,-22,-24, 12,-14,  5,  7,-22,-18,-13,-20, -9, -3, 18,-27,-13,-14;
/M: SY='G'; M=  0,-10,-30,-10,-20,-30, 58,-20,-40,-19,-40,-30,  0,-20,-19,-19,  0,-20,-30,-20,-30,-20;
/M: SY='M'; M=-10,-31,-10,-31,-21,  0,-31,-21, 12,-12, 21, 46,-21,-21, -3,-12,-11,-10, 11,-12,-10,-12;
/M: SY='K'; M=-12,  6,-26,  1,  2,-24,-16, -6,-21, 10,-19,-12, 10,-16,  2,  5,  0, -3,-18,-31,-19,  1;
/M: SY='P'; M= -5,-17,-21,-16, -7,-21,-22,-14,-16, -1,-12, -8,-14,  5, -3, -4, -6, -7,-11,-27,-15, -6;
/M: SY='E'; M= -9,  4,-29,  6, 13,-26,-12, -6,-24,  3,-24,-16,  4, -9,  4, -4,  0, -6,-18,-30,-19, 10;
/M: SY='A'; M= 11,-12,-12,-13, -7,-20, -7,-14,-13, -6,-13, -9, -7, -8, -7,-11,  6, -1, -7,-28,-17, -8;
/M: SY='V'; M= -4,-24,-13,-26,-19, -7,-29,-23, 16,-16,  6,  5,-21,-21,-17,-18,-13,  0, 18,-26,-10,-19;
/M: SY='Q'; M=-10, -2,-28, -3,  8,-25,-15, -4,-26,  8,-20, -7,  0,-14, 20,  9, -2, -8,-20,-24,-14, 11;
/M:         M= -8, -8,-21,-10, -4,-16,-15, -3,-19, -4,-17, -9, -3, -9, -2, -6, -3, -6,-15,-23,-11, -3;
/I:         E1=0; IE=-105; DE=-105;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 463 in 463 different sequences
Number of true positive hits 461 in 461 different sequences
Number of 'unknown' hits 2 in 2 different sequences
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 7
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] N_Hulo
Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Feature key [info] DNA_BIND
Feature description [info] Nuclear receptor
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
461 sequences

7UP1_DROME  (P16375    ), 7UP2_DROME  (P16376    ), ANDR_CANLF  (Q9TT90    ), 
ANDR_CROCR  (Q8MIK0    ), ANDR_EULFC  (O97776    ), ANDR_HUMAN  (P10275    ), 
ANDR_LITCT  (Q7T1K4    ), ANDR_MACFA  (O97952    ), ANDR_MACMU  (Q6QT55    ), 
ANDR_MOUSE  (P19091    ), ANDR_PANTR  (O97775    ), ANDR_PAPHA  (O97960    ), 
ANDR_PIG    (Q9GKL7    ), ANDR_RABIT  (P49699    ), ANDR_RAT    (P15207    ), 
CNR14_CAEEL (P41830    ), COT1_BOVIN  (Q9TTR8    ), COT1_HUMAN  (P10589    ), 
COT1_MOUSE  (Q60632    ), COT2_BOVIN  (Q9TTR7    ), COT2_CHICK  (Q90733    ), 
COT2_HUMAN  (P24468    ), COT2_MOUSE  (P43135    ), COT2_RAT    (O09018    ), 
DAF12_CAEEL (G5EFF5    ), E75BA_DROME (P17672    ), E75BB_DROME (P13055    ), 
E75BC_DROME (P17671    ), E75_CHOFU   (O01639    ), E75_GALME   (P50239    ), 
E75_MANSE   (Q08893    ), E75_METEN   (O77245    ), E78C_DROME  (P45447    ), 
ECR_AEDAE   (P49880    ), ECR_BOMMO   (P49881    ), ECR_CHITE   (P49882    ), 
ECR_DROME   (P34021    ), ECR_HELVI   (O18473    ), ECR_LUCCU   (O18531    ), 
ECR_MANSE   (P49883    ), EGON_DROME  (P15370    ), ERR1_CANLF  (Q6QMY5    ), 
ERR1_HUMAN  (P11474    ), ERR1_MOUSE  (O08580    ), ERR1_RAT    (Q5QJV7    ), 
ERR2_HUMAN  (O95718    ), ERR2_MOUSE  (Q61539    ), ERR2_RAT    (P11475    ), 
ERR3_HUMAN  (P62508    ), ERR3_MOUSE  (P62509    ), ERR3_PONAB  (Q5RAM2    ), 
ERR3_RAT    (P62510    ), ESR1_ASPUN  (Q91424    ), ESR1_BOVIN  (P49884    ), 
ESR1_CHICK  (P06212    ), ESR1_DANRE  (P57717    ), ESR1_FELCA  (Q53AD2    ), 
ESR1_HORSE  (Q9TV98    ), ESR1_HUMAN  (P03372    ), ESR1_ICTPU  (Q9YHZ7    ), 
ESR1_MESAU  (Q9QZJ5    ), ESR1_MICUN  (P57753    ), ESR1_MOUSE  (P19785    ), 
ESR1_ONCMY  (P16058    ), ESR1_OREAU  (P50240    ), ESR1_ORENI  (Q9YH33    ), 
ESR1_ORYLA  (P50241    ), ESR1_PAGMA  (O42132    ), ESR1_PIG    (Q29040    ), 
ESR1_RAT    (P06211    ), ESR1_SALSA  (P50242    ), ESR1_SHEEP  (P49885    ), 
ESR1_SPAAU  (Q9PVZ9    ), ESR1_TAEGU  (Q91250    ), ESR1_XENLA  (P81559    ), 
ESR21_CARAU (Q9W669    ), ESR22_CARAU (Q9IAL9    ), ESR2_ANGJA  (O13012    ), 
ESR2_BOVIN  (Q9XSB5    ), ESR2_CALJA  (Q95171    ), ESR2_CHICK  (Q9PTU5    ), 
ESR2_COTJA  (O93511    ), ESR2_HUMAN  (Q92731    ), ESR2_ICTPU  (Q9IAK1    ), 
ESR2_MICUN  (P57781    ), ESR2_MOUSE  (O08537    ), ESR2_ONCMY  (P57782    ), 
ESR2_ORENI  (Q9YH32    ), ESR2_PIG    (Q9XSW2    ), ESR2_RAT    (Q62986    ), 
ESR2_SHEEP  (Q9TU15    ), ESR2_SPAAU  (Q9W6M2    ), ESR2_STUVU  (Q9PVE2    ), 
ESR3_MICUN  (P57783    ), FTF1B_DROME (Q05192    ), FTZF1_BOMMO (P49867    ), 
FTZF1_DROME (P33244    ), GAG_AVIER   (P03373    ), GCNFA_DANRE (Q9PU65    ), 
GCNFB_DANRE (Q4V8R7    ), GCR_AOTNA   (P79686    ), GCR_CALJA   (Q6XLJ0    ), 
GCR_CAVPO   (P49115    ), GCR_HUMAN   (P04150    ), GCR_MOUSE   (P06537    ), 
GCR_ONCMY   (P49843    ), GCR_PAROL   (O73673    ), GCR_PIG     (Q9N1U3    ), 
GCR_PONAB   (Q5R9P5    ), GCR_RABIT   (P59667    ), GCR_RAT     (P06536    ), 
GCR_SAGOE   (P79269    ), GCR_SAIBB   (O13186    ), GCR_SAISC   (O46567    ), 
GCR_SHEEP   (P35547    ), GCR_TUPBE   (Q95267    ), GCR_XENLA   (P49844    ), 
HNF4A_HUMAN (P41235    ), HNF4A_MOUSE (P49698    ), HNF4A_RAT   (P22449    ), 
HNF4A_XENLA (Q91766    ), HNF4B_XENLA (P79926    ), HNF4G_HUMAN (Q14541    ), 
HNF4G_MOUSE (Q9WUU6    ), HNF4_DROME  (P49866    ), HR38_BOMMO  (P49870    ), 
HR38_DROME  (P49869    ), HR3_DROME   (P31396    ), HR3_GALME   (P49868    ), 
HR3_MANSE   (Q08882    ), HR4_DROME   (Q9W539    ), HR78_DROME  (Q24142    ), 
HR96_DROME  (Q24143    ), KNIR_DROME  (P10734    ), KNIR_DROVI  (Q24753    ), 
KNRL_DROME  (P13054    ), MCR_AOTNA   (Q3YC04    ), MCR_HUMAN   (P08235    ), 
MCR_MOUSE   (Q8VII8    ), MCR_ONCMY   (Q9IAC6    ), MCR_RAT     (P22199    ), 
MCR_SAIBB   (Q4JM28    ), MCR_SAISC   (Q9N0W8    ), MCR_TUPBE   (Q29131    ), 
MCR_XENLA   (Q91573    ), N2C1A_XENLA (Q6GN21    ), N2C1B_XENLA (Q66J63    ), 
N2F1A_DANRE (Q06725    ), N2F1B_DANRE (Q6PH18    ), NH100_CAEEL (O17611    ), 
NH103_CAEEL (O16359    ), NH106_CAEEL (O16966    ), NH108_CAEEL (O45449    ), 
NH111_CAEEL (O45521    ), NH115_CAEEL (O16662    ), NH121_CAEEL (Q9TZ99    ), 
NH124_CAEEL (O16391    ), NH125_CAEEL (O17082    ), NH127_CAEEL (O18087    ), 
NH130_CAEEL (O16963    ), NH133_CAEEL (O16354    ), NH134_CAEEL (O16361    ), 
NH136_CAEEL (O01930    ), NH150_CAEEL (O17573    ), NH153_CAEEL (O01929    ), 
NH154_CAEEL (O01931    ), NH164_CAEEL (O17657    ), NH167_CAEEL (O17683    ), 
NH169_CAEEL (O17706    ), NH174_CAEEL (O17748    ), NH197_CAEEL (O17931    ), 
NH199_CAEEL (O17934    ), NH213_CAEEL (O18048    ), NH217_CAEEL (O02305    ), 
NH218_CAEEL (O18086    ), NH268_CAEEL (O17930    ), NHR10_CAEEL (P41999    ), 
NHR11_CAEEL (Q23294    ), NHR12_CAEEL (Q21701    ), NHR13_CAEEL (Q9N4Q7    ), 
NHR14_CAEEL (O02151    ), NHR16_CAEEL (Q27521    ), NHR18_CAEEL (O16360    ), 
NHR19_CAEEL (Q09528    ), NHR1_CAEEL  (Q21878    ), NHR1_ONCVO  (Q25604    ), 
NHR20_CAEEL (Q09565    ), NHR22_CAEEL (Q09587    ), NHR23_CAEEL (P41828    ), 
NHR25_CAEEL (Q19345    ), NHR28_CAEBR (A8XNK6    ), NHR28_CAEEL (Q17905    ), 
NHR2_CAEEL  (Q10902    ), NHR31_CAEEL (Q18192    ), NHR34_CAEEL (Q21006    ), 
NHR35_CAEEL (Q17771    ), NHR3_CAEEL  (Q9XTJ4    ), NHR40_CAEEL (Q22127    ), 
NHR41_CAEEL (Q9N4B8    ), NHR42_CAEEL (O76828    ), NHR44_CAEEL (Q22555    ), 
NHR47_CAEEL (Q17370    ), NHR48_CAEEL (Q94407    ), NHR49_CAEEL (O45666    ), 
NHR4_CAEEL  (O45436    ), NHR51_CAEEL (O17927    ), NHR52_CAEEL (O17928    ), 
NHR53_CAEEL (O17933    ), NHR54_CAEEL (O45460    ), NHR55_CAEEL (O16962    ), 
NHR57_CAEEL (O16425    ), NHR59_CAEEL (Q9TXJ1    ), NHR5_CAEEL  (Q9NA51    ), 
NHR61_CAEEL (O62389    ), NHR62_CAEEL (O02279    ), NHR64_CAEEL (O44960    ), 
NHR65_CAEEL (O45907    ), NHR67_CAEEL (Q9XVV3    ), NHR69_CAEEL (P91829    ), 
NHR6_CAEEL  (P41829    ), NHR71_CAEEL (Q9GTD4    ), NHR75_CAEEL (O16604    ), 
NHR77_CAEEL (O02316    ), NHR79_CAEEL (O18141    ), NHR7_CAEEL  (Q20765    ), 
NHR85_CAEEL (Q9XUK7    ), NHR86_CAEEL (Q965W2    ), NHR89_CAEEL (O02235    ), 
NHR8_CAEEL  (Q9XYB7    ), NHR90_CAEEL (O17025    ), NHR91_CAEEL (Q9U2R6    ), 
NHR96_CAEEL (Q95X91    ), NHR97_CAEEL (Q9BJK5    ), NHR98_CAEEL (Q966I0    ), 
NHR9_CAEEL  (Q23489    ), NR1D1_BOVIN (Q08E02    ), NR1D1_HUMAN (P20393    ), 
NR1D1_MOUSE (Q3UV55    ), NR1D1_RAT   (Q63503    ), NR1D1_SHEEP (B3SV56    ), 
NR1D2_HUMAN (Q14995    ), NR1D2_MOUSE (Q60674    ), NR1D2_RAT   (Q63504    ), 
NR1H2_BOVIN (Q5BIS6    ), NR1H2_HUMAN (P55055    ), NR1H2_MOUSE (Q60644    ), 
NR1H2_RAT   (Q62755    ), NR1H3_BOVIN (Q5E9B6    ), NR1H3_HUMAN (Q13133    ), 
NR1H3_MOUSE (Q9Z0Y9    ), NR1H3_RAT   (Q62685    ), NR1H4_BOVIN (Q3SZL0    ), 
NR1H4_HUMAN (Q96RI1    ), NR1H4_MOUSE (Q60641    ), NR1H4_RAT   (Q62735    ), 
NR1I2_HUMAN (O75469    ), NR1I2_MACMU (Q8SQ01    ), NR1I2_MOUSE (O54915    ), 
NR1I2_RAT   (Q9R1A7    ), NR1I3_CALUR (P62044    ), NR1I3_HUMAN (Q14994    ), 
NR1I3_MACMU (Q8MIM3    ), NR1I3_MOUSE (O35627    ), NR1I3_PANTR (A2T7D9    ), 
NR1I3_PUSSI (P62045    ), NR1I3_RAT   (Q9QUS1    ), NR2C1_BOVIN (A0JNE3    ), 
NR2C1_HUMAN (P13056    ), NR2C1_MACFA (Q95K90    ), NR2C1_MOUSE (Q505F1    ), 
NR2C1_PONAB (Q5RCZ5    ), NR2C1_RAT   (Q8VIJ4    ), NR2C1_XENTR (Q28CK1    ), 
NR2C2_HUMAN (P49116    ), NR2C2_MOUSE (P49117    ), NR2C2_RAT   (P55094    ), 
NR2E1_CHICK (Q91379    ), NR2E1_HUMAN (Q9Y466    ), NR2E1_MOUSE (Q64104    ), 
NR2E1_ORYLA (Q9YGL3    ), NR2E1_XENLA (P70052    ), NR2E3_BOVIN (Q9TTF0    ), 
NR2E3_HUMAN (Q9Y5X4    ), NR2E3_MOUSE (Q9QXZ7    ), NR2F5_DANRE (Q06726    ), 
NR2F6_HUMAN (P10588    ), NR2F6_MOUSE (P43136    ), NR2F6_RAT   (O09017    ), 
NR4A1_BOVIN (Q0V8F0    ), NR4A1_CANLF (P51666    ), NR4A1_HUMAN (P22736    ), 
NR4A1_MOUSE (P12813    ), NR4A1_RAT   (P22829    ), NR4A1_XENLA (Q04913    ), 
NR4A2_BOVIN (Q08E53    ), NR4A2_HUMAN (P43354    ), NR4A2_MOUSE (Q06219    ), 
NR4A2_PONAB (Q5R5Y4    ), NR4A2_RAT   (Q07917    ), NR4A2_XENTR (A4IIG7    ), 
NR4A3_HUMAN (Q92570    ), NR4A3_MOUSE (Q9QZB6    ), NR4A3_RAT   (P51179    ), 
NR5A2_CHICK (O42101    ), NR5A2_HUMAN (O00482    ), NR5A2_MOUSE (P45448    ), 
NR5A2_RAT   (Q9QWM1    ), NR6A1_HUMAN (Q15406    ), NR6A1_MOUSE (Q64249    ), 
NR6A1_PIG   (A0P8Z4    ), NR6A1_XENLA (P70033    ), NR6A1_XENTR (Q66JK1    ), 
ODR7_CAEEL  (P41933    ), PPARA_CANLF (Q95N78    ), PPARA_CAVPO (O35507    ), 
PPARA_HUMAN (Q07869    ), PPARA_MOUSE (P23204    ), PPARA_PHACI (Q8HYL6    ), 
PPARA_RAT   (P37230    ), PPARA_XENLA (P37232    ), PPARD_CANLF (Q0ZAQ8    ), 
PPARD_HUMAN (Q03181    ), PPARD_MOUSE (P35396    ), PPARD_XENLA (P37233    ), 
PPARG_BOVIN (O18971    ), PPARG_CANLF (Q4U3Q4    ), PPARG_CRIGR (P57797    ), 
PPARG_HUMAN (P37231    ), PPARG_MACMU (O18924    ), PPARG_MOUSE (P37238    ), 
PPARG_PIG   (O62807    ), PPARG_RABIT (O19052    ), PPARG_RAT   (O88275    ), 
PPARG_XENLA (P37234    ), PRGR_ATEPA  (A7XW25    ), PRGR_CANLF  (Q9GLW0    ), 
PRGR_CHICK  (P07812    ), PRGR_CHLAE  (A7X8C9    ), PRGR_COLGU  (A7X8D2    ), 
PRGR_GORGO  (A7X8B7    ), PRGR_HUMAN  (P06401    ), PRGR_HYLLA  (A7X8C2    ), 
PRGR_MACSY  (A7X8C4    ), PRGR_MOUSE  (Q00175    ), PRGR_PANPA  (A7X8B5    ), 
PRGR_PANTR  (A7X8B3    ), PRGR_PAPAN  (A7X8C7    ), PRGR_PITIR  (A7XW20    ), 
PRGR_PONPY  (A7X8B9    ), PRGR_RABIT  (P06186    ), PRGR_RANDY  (Q8AYI2    ), 
PRGR_RAT    (Q63449    ), PRGR_SAPAP  (A7XW16    ), PRGR_SHEEP  (Q28590    ), 
PRGR_TRAOB  (A7X8D4    ), RARAA_DANRE (Q90271    ), RARAB_DANRE (Q7ZTI3    ), 
RARA_CANLF  (Q5FBR4    ), RARA_CHICK  (Q90966    ), RARA_HUMAN  (P10276    ), 
RARA_MOUSE  (P11416    ), RARA_NOTVI  (P18514    ), RARA_TAKRU  (Q9W5Z3    ), 
RARA_XENLA  (P51126    ), RARB_CHICK  (P22448    ), RARB_COTJA  (Q9W6B3    ), 
RARB_HUMAN  (P10826    ), RARB_MOUSE  (P22605    ), RARB_NOTVI  (P18515    ), 
RARGA_DANRE (Q91392    ), RARGB_DANRE (A2T928    ), RARG_HUMAN  (P13631    ), 
RARG_MOUSE  (P18911    ), RARG_NOTVI  (P18516    ), RARG_XENLA  (P28699    ), 
RORA_HUMAN  (P35398    ), RORA_MOUSE  (P51448    ), RORB_HUMAN  (Q92753    ), 
RORB_MOUSE  (Q8R1B8    ), RORB_RAT    (P45446    ), RORG_HUMAN  (P51449    ), 
RORG_MOUSE  (P51450    ), RORG_PONAB  (Q5RAP4    ), RXRAA_DANRE (A2T929    ), 
RXRAB_DANRE (Q90415    ), RXRA_HUMAN  (P19793    ), RXRA_MOUSE  (P28700    ), 
RXRA_RAT    (Q05343    ), RXRA_XENLA  (P51128    ), RXRBA_DANRE (Q7SYN5    ), 
RXRBB_DANRE (Q90417    ), RXRB_CANLF  (Q5TJF7    ), RXRB_HUMAN  (P28702    ), 
RXRB_MOUSE  (P28704    ), RXRB_RAT    (P49743    ), RXRGA_DANRE (Q90416    ), 
RXRGB_DANRE (Q6DHP9    ), RXRG_BOVIN  (Q0VC20    ), RXRG_CHICK  (P28701    ), 
RXRG_HUMAN  (P48443    ), RXRG_MOUSE  (P28705    ), RXRG_PIG    (Q0GFF6    ), 
RXRG_PONAB  (Q5REL6    ), RXRG_RAT    (Q5BJR8    ), RXRG_XENLA  (P51129    ), 
RXR_BIOGL   (Q8T5C6    ), RXR_LYMST   (Q5I7G2    ), SHR2_STRPU  (Q26622    ), 
STF1_BOVIN  (Q04752    ), STF1_HORSE  (Q9GKL2    ), STF1_HUMAN  (Q13285    ), 
STF1_MACEU  (Q95L87    ), STF1_MOUSE  (P33242    ), STF1_PIG    (P79387    ), 
STF1_RAT    (P50569    ), THAA_DANRE  (Q98867    ), THAA_PAROL  (Q91241    ), 
THAA_XENLA  (P15204    ), THAB_PAROL  (Q91242    ), THAB_XENLA  (P18115    ), 
THA_APTPA   (O42295    ), THA_CAIMO   (Q90382    ), THA_CHICK   (P04625    ), 
THA_HIPHI   (Q9W6N4    ), THA_HUMAN   (P10827    ), THA_LITCT   (Q02777    ), 
THA_MOUSE   (P63058    ), THA_NECMA   (O57606    ), THA_PIG     (O97716    ), 
THA_PYGAD   (O42450    ), THA_RAT     (P63059    ), THA_SALSA   (Q9W785    ), 
THA_SHEEP   (Q28570    ), THBA_XENLA  (P18117    ), THBB_XENLA  (P18119    ), 
THB_CAIMO   (P68305    ), THB_CHICK   (P68306    ), THB_DANRE   (Q9PVE4    ), 
THB_HUMAN   (P10828    ), THB_LITCT   (Q02965    ), THB_MOUSE   (P37242    ), 
THB_PAROL   (Q91279    ), THB_RAT     (P18113    ), THB_SHEEP   (Q28571    ), 
TLL_DROME   (P18102    ), TLL_DROVI   (O16845    ), USP_BOMMO   (P49700    ), 
USP_CHOFU   (O76202    ), USP_DROME   (P20153    ), USP_MANSE   (P54779    ), 
VDRA_DANRE  (Q9PTN2    ), VDRB_DANRE  (Q1L673    ), VDR_BOVIN   (Q28037    ), 
VDR_CHICK   (O42392    ), VDR_COTJA   (P49701    ), VDR_HUMAN   (P11473    ), 
VDR_MOUSE   (P48281    ), VDR_PIG     (A3RGC1    ), VDR_RAT     (P13053    ), 
VDR_SAGOE   (Q95MH5    ), VDR_XENLA   (O13124    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
7 sequences

ESR1_ANOCA  (Q9YHT3    ), ESR1_MACMU  (P49886    ), ESR2_MACMU  (Q9TTE5    ), 
PRGR_MACEU  (P79373    ), THA_ELECQ   (Q9PUA8    ), THA_ONCMY   (Q9W6I9    ), 
THA_SPAAU   (O57568    )
» more

UniProtKB/Swiss-Prot
'Unknown' sequences
2 sequences

TRX_DROME   (P20659    ), TRX_DROVI   (Q24742    )

		
PDB
[Detailed view]
65 PDB

1A6Y; 1BY4; 1CIT; 1DSZ; 1GA5; 1GDC; 1GLU; 1HCP; 1HCQ; 1HLZ; 1HRA; 1KB2; 1KB4; 1KB6; 1LAT; 1LO1; 1R0N; 1R0O; 1R4I; 1R4O; 1R4R; 1RGD; 1RXR; 1YNW; 2A66; 2C7A; 2EBL; 2ENV; 2FF0; 2GDA; 2HAN; 2NLL; 3CBB; 3DZU; 3DZY; 3E00; 3FYL; 3G6P; 3G6Q; 3G6R; 3G6T; 3G6U; 3G8U; 3G8X; 3G97; 3G99; 3G9I; 3G9J; 3G9M; 3G9O; 3G9P; 3M9E; 4AA6; 4CN2; 4CN3; 4CN5; 4CN7; 4HN5; 4HN6; 4IQR; 4NQA; 4TNT; 4UMM; 5CC0; 5CC1
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission