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| Entry: PS51318 |
| General information about the entry | |
|---|---|
| Entry name | TAT |
| Accession number | PS51318 |
| Entry type | MATRIX |
| Date | MAY-2007 (CREATED); MAY-2007 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC51318 |
| Associated ProRule | PRU00648 |
| Name and characterization of the entry | |
| Description | Twin arginine translocation (Tat) signal profile. |
| Matrix / Profile | /GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=40;
/DISJOINT: DEFINITION=PROTECT; N1=5; N2=36;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=4.1003532; R2=0.0044078; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=999; N_SCORE=7.6; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=545; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-28; D=-200; I=-200; B0=*; B1=*; E1=-300; MI=-205; MD=-205; IM=-205; DM=-205;
A C D E F G H I K L M N P Q R S T V W Y
/I: I=-50; B0=0; BI=-205; BD=-205;
/M: SY='M'; M= -51, -59, -74, -63, -41, -66, -44, -25, -56, -18, 142, -60, -61, -48, -54, -61, -50, -30, -64, -40; D=-50;
/I: I=-50;
/M: SY='S'; M= -4, -22, -4, -8, -36, -17, -6, -26, 16, -27, -13, 22, 12, -4, -2, 40, 37, -32, -47, -37; D=-5;
/I: I=-4; MD=-17;
/M: SY='D'; M= -15, -38, 28, 8, -27, -24, 12, -15, 18, -25, 7, 21, -11, 19, 13, 6, 6, -29, -41, -30; D=-1;
/I: I=-4; MD=-17;
/M: SY='H'; M= -24, -60, 10, 4, -19, -29, 19, -16, 14, -18, -15, 5, 18, 13, 7, 13, 13, -24, -33, -30; D=-1;
/I: I=-4; MD=-17;
/M: SY='P'; M= -18, -36, 14, 0, -21, -26, 9, -21, 12, -25, -15, 16, 24, 4, -3, 5, 7, -32, -38, -42; D=-1;
/I: I=-4; MD=-17;
/M: SY='P'; M= -21, -42, 2, -1, -22, -19, -4, -22, 4, -27, -31, 12, 22, 6, -1, 6, 8, -30, -37, -35; D=-1;
/I: I=-4; MD=-17;
/M: SY='P'; M= -13, -25, 2, -13, -15, -27, -3, -26, -5, -25, -19, 5, 21, -8, -4, 12, 0, -38, -41, -38; D=-1;
/I: I=-4; MD=-17;
/M: SY='P'; M= -9, -39, -4, -13, -31, -17, -4, -43, -12, -30, -35, 2, 18, -5, -2, 6, -2, -36, -23, -51; D=-1;
/I: I=-4; MD=-17;
/M: SY='P'; M= -12, -43, -15, -16, -44, -9, -13, -36, -23, -27, -26, -9, 10, -1, -5, 1, -16, -32, -41, -48; D=-1;
/I: I=-4; MD=-17;
/M: SY='P'; M= -11, -42, -20, -19, -65, -16, -19, -41, -30, -26, -22, -16, -2, -19, -19, -11, -10, -39, -51, -67; D=-1;
/I: I=-4; MI=0; MD=-17; IM=0; DM=-17;
/M: SY='G'; M= -22, -67, -21, -44, -53, 10, -37, -76, -25, -65, -33, -14, -16, -20, -12, -17, -20, -65, -47, -42; D=-1;
/I: I=-4; DM=-17;
/M: SY='M'; M= -38, -54, -63, -60, 8, -60, -44, 29, -59, 36, 38, -41, 10, -28, -52, -38, -5, 21, -25, -37; D=-1;
/I: I=-17; DM=-17;
/M: SY='S'; M= -28, -57, 13, -33, -65, 0, -25, -62, -32, -61, -55, 33, -28, -9, -36, 73, 48, -55, -75, -58;
/M: SY='R'; M=-115,-131,-111, -99,-123,-125,-100,-130, -40,-123,-111,-104,-123, -87, 124,-109,-113,-124,-123,-110;
/M: SY='R'; M=-115,-131,-111, -99,-123,-113,-100,-130, -64,-123,-111,-104,-123, -87, 124,-109,-113,-124, -78,-110;
/M: SY='D'; M= -2, -55, 43, -1, -62, 8, 18, -64, -4, -61, -50, 14, -57, 40, 35, 24, 14, -53, -73, -54;
/M: SY='F'; M= -22, -88,-133,-127, 108,-116,-102, -27,-124, 30, 9,-125,-108,-110,-122,-106, -95, 4, 2, -67;
/M: SY='L'; M=-101, -66,-132,-125, -18,-120, -95, 26,-124, 84, 48,-102,-129,-118,-122,-113, -84, 1,-119,-100;
/M: SY='K'; M= 5, -58, -48, -25, -52, 12, -22, -42, 63, -33, -21, -22, -57, 39, 33, -7, 0, -35, -52, -39;
/M: SY='G'; M= 29, -43, -44, -53, -7, 41, -33, -29, -24, 4, 2, -17, -60, -8, -4, 1, 28, -16, -6, -15;
/M: SY='A'; M= 46, 18, -58, -56, -34, 20, -58, -19, -55, 6, 15, -46, -53, -52, -58, 34, 29, -4, -68, -56;
/M: SY='A'; M= 58, -25, -57, -56, -51, 48, -59, -39, -54, -1, -15, -47, -48, -51, -60, 10, 13, -14, -67, -59;
/M: SY='A'; M= 56, -38, -59, -57, -23, 20, -54, -1, -35, 12, 10, -51, -61, -40, -41, -5, 3, 12, -23, -41;
/M: SY='A'; M= 46, -38, -60, -58, -21, 34, -60, -17, -54, 20, 2, -52, -56, -55, -61, 2, 23, 12, -66, -48;
/M: SY='A'; M= 52, -38, -56, -57, -41, 46, -60, -16, -56, -6, -18, -49, -38, -54, -60, 10, 21, 3, -56, -58;
/M: SY='A'; M= 55, -31, -61, -59, -34, 36, -61, -11, -58, 18, -11, -53, -37, -55, -59, -15, -3, 17, -66, -56;
/M: SY='A'; M= 53, -35, -59, -57, -27, 34, -59, -30, -56, 11, 1, -48, -53, -51, -60, 16, 16, 5, -50, -42;
/M: SY='A'; M= 47, -26, -62, -58, -23, 20, -55, -6, -57, 26, 15, -52, -21, -49, -60, -2, 8, 15, -43, -45;
/M: SY='A'; M= 53, -26, -60, -54, -22, 25, -60, -23, -56, 9, 9, -47, -7, -49, -58, 7, 7, 14, -21, -42;
/M: SY='L'; M= 36, -28, -61, -57, 11, -4, -60, 8, -60, 38, 23, -55, -43, -52, -62, -9, 14, 14, -26, -38;
/I: I=-23; MD=-24;
/M: SY='G'; M= 40, -53, -49, -54, -38, 47, -46, -32, -57, -13, -21, -40, 22, -39, -55, 18, -4, -20, -35, -46; D=-23;
/I: I=-23; MD=-24;
/M: SY='G'; M= 25, -21, -48, -54, -27, 34, -45, -40, -52, -12, -19, -36, 13, -29, -29, 26, 8, -27, -32, -37; D=-23;
/I: I=-23; MD=-24;
/M: SY='A'; M= 22, 6, -66, -62, -25, 7, -24, -33, -54, 8, -8, -32, -34, -40, -54, 11, -3, -11, 14, -36; D=-23;
/I: I=-23; MI=0; MD=-24; IM=0; DM=-24;
/M: SY='M'; M= 8, -27, -58, -63, 13, 3, -53, -26, -71, 0, 17, -58, -40, -52, -68, -5, -7, -23, -4, -58; D=-23;
/I: I=-23; DM=-24;
/M: SY='A'; M= 27, -62, -47, -44, -19, -9, -43, -19, -39, 19, 9, -10, -43, -8, -6, -1, 2, -6, -18, -44; D=-23;
/I: I=-23; DM=-24;
/M: SY='P'; M= -41, -75, -38, -28, -71, 1, -31, -66, -28, -67, -58, -34, 100, -23, -6, 18, 0, -59, -73, -66; D=-23;
/I: I=-23; MI=0; MD=-24; IM=0; DM=-24;
/M: SY='A'; M= 20, -55, -29, -8, -43, -11, -30, -13, -11, -15, -21, -26, -20, 5, 11, 3, 7, 1, -38, -36; D=-23;
/I: I=-23; DM=-24;
/M: SY='A'; M= 94, -93,-110, -85,-120, -60,-116, -88, -97, -54, -66,-109, -58, -30, -51, 7, -34, 6,-125,-117;
/M: SY='W'; M= 7, -49, -10, 5, 10, -29, 27, -41, -11, -1, 0, -8, 3, 36, 16, 9, 1, -27, 45, -15;
/M: SY='A'; M= 105,-109,-100, -93,-123, -72,-117,-109, -84,-110,-109,-109, -96, -81, -83, -51, -66, -94,-123,-109;
/I: E1=0; IE=-205; DE=-205;
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| Post-processing | |
| COMPETES_HIT_WITH: PS51257; | |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:AAUA_ALCFA (P84887), AGAR_STRCO (P07883), AIOB_ALCFA (Q7SIF3), AIOB_HERAR (Q8GGJ7), AMIA_ECOLI (P36548), AMIC_ECOL6 (P63884), AMIC_ECOLI (P63883), ANTRB_HALVD (D4GSY9), BLA2_STEMA (P96465), BLAC_STRAL (P14559), BLAC_STRAU (P10509), BLAC_STRCE (Q06650), BLAC_STRFR (P35392), BLAC_STRLA (P35393), BLAF_MYCFO (Q59517), CAH_NOSS1 (P94170), CHOD_BREST (P22637), CHOD_STRS0 (P12676), CLRA_IDEDE (P60068), CMPA_SYNE7 (P39660), CMPA_SYNP6 (Q5MZ56), CMPA_SYNY3 (Q55460), COPA_PSESM (P59571), COPA_PSEUB (P12374), CPRA_DESHD (P81594), CUEO_ECO57 (Q8X947), CUEO_ECOLI (P36649), CUEO_SALTI (Q8Z9E1), CUEO_SALTY (Q8ZRS2), CUEO_YERPE (Q8ZBK0), CUT2_MYCBO (P63882), CUT2_MYCTU (P63881), DDHA_RHOSU (Q8GPG4), DHAQ_ACEPO (P17201), DHML_METEA (P00372), DHSU_ALLVD (Q06530), DMSA_ECOLI (P18775), DMSA_HAEIN (P45004), DSTOR_RHOCA (Q52675), DSTOR_RHOSH (Q57366), DYP_THEFY (Q47KB1), E13B_ARTSW (Q59146), E13B_CELCE (P22222), EFEB_ECO57 (Q8XAS4), EFEB_ECOK1 (A1A9S3), EFEB_ECOL5 (Q0TJ48), EFEB_ECOL6 (Q8CW71), EFEB_ECOLI (P31545), EFEB_ECOUT (Q1RDJ8), EFEB_SHIBS (Q31Z86), EFEB_SHIF8 (Q0T616), EFEB_SHIFL (Q83LK4), EFEB_SHISS (Q3Z396), EFEB_YERPE (Q7CI09), EFEB_YERPN (Q1CHD5), EFEB_YERPS (Q66BP4), EFEN_BACSU (P39597), FDHA_DESGI (Q934F5), FDNG_ECOLI (P24183), FDOG_ECOLI (P32176), FDXG_HAEIN (P46448), FTSP_ACTPJ (B0BR79), FTSP_AGGAN (C6AK71), FTSP_DICD3 (E0SI60), FTSP_ECOLI (P26648), FTSP_EDWTF (E0T5V0), FTSP_ERWCT (Q6DAA8), FTSP_GALAU (F4HDA7), FTSP_HAEI8 (Q4QMG3), FTSP_HAEIN (P44847), FTSP_HAEPS (B8F891), FTSP_PASMU (Q9CPE1), FTSP_PHOLL (Q7N0E3), FTSP_PROMH (B4F2J0), FTSP_RAHSY (E8XXT6), FTSP_SALTI (P0A1C6), FTSP_SALTY (P0A1C5), FTSP_SHIDS (Q32BS6), FTSP_SODGM (Q2NWC3), FTSP_XENNA (D3VCR0), FTSP_YERPE (Q7CGI0), FUTA2_SYNY3 (Q55835), G1091_AKKM8 (B2UL75), G1091_SHESA (A0KV43), G1091_SHESM (Q0HKG4), G1091_SHESR (Q0HWR6), G1092_AKKM8 (B2UQL7), G1092_SHESA (A0KYQ9), G1092_SHESM (Q0HH61), G1092_SHESR (Q0HTG8), GADH3_PECCY (O34213), GFO_ZYMMO (Q07982), GH109_BACFO (A4Q8G1), GH109_PARD8 (A6LB54), GH109_SACEN (A4FN60), GH109_SHEAM (A1S4U5), GH109_SHEB5 (A3D6B7), GH109_SHEB8 (A6WQ58), GH109_SHEB9 (A9KUT1), GH109_SHEON (Q8ECL7), GH109_SHEPA (A8H2K3), GH109_SHEPC (A4Y8C8), GH109_SHESW (A1RI61), GH109_SHEWM (B1KNF7), GH109_SOLUE (Q01S58), GH109_STRCO (Q9RK81), GH109_STRFL (Q50EA3), GH109_STRGG (B1W5J7), GH109_STRMK (B2FLK4), GH109_STRSH (Q50HM6), GNL_ZYMMO (Q01578), GRIE_STRGG (B1VTI4), GUN2_THEFU (P26222), GUNA_CELFI (P07984), HLY_NATA1 (P29143), HMEA_ARCFU (O29751), HYEP_STIAD (Q06816), HYSA_PROAA (P0CZ00), HYSA_PROAC (P0CZ01), IABF_STRCX (P82594), IDIA_SYNE7 (Q31L64), IDIA_SYNP6 (Q5N0R0), IMD_ARTGO (Q44052), IRO_THIFE (P50500), LCP_STRK3 (Q3L8N0), MBHS_ALCHY (P33375), MBHS_AZOCH (P18190), MBHS_AZOVI (P21950), MBHS_BRAJA (P12635), MBHS_CITFR (Q46045), MBHS_CUPNH (P31892), MBHS_ECOL6 (P69740), MBHS_ECOLI (P69739), MBHS_OLICO (O33405), MBHS_RHILV (P18637), MBHS_RUBGE (P17633), MBHS_SHIFL (Q83RW9), MBHS_WOLSU (P31884), MBHT_ECO57 (P69743), MBHT_ECOL6 (P69742), MBHT_ECOLI (P69741), MER3_STRLI (P30343), MOBDB_HALVD (D4GQ16), NAPA1_PHOPR (Q6LTV9), NAPA2_PHOPR (Q6LQJ3), NAPA_ACTP2 (A3N277), NAPA_ACTP7 (B3H2D1), NAPA_ACTPJ (B0BR28), NAPA_ACTSZ (A6VQY7), NAPA_AERHH (A0KIM1), NAPA_AERS4 (A4SPG7), NAPA_AGGAC (Q8VL02), NAPA_AGRT5 (Q8U7P1), NAPA_BORPA (Q7W733), NAPA_BORPD (A9I7M5), NAPA_BRAJA (Q89EN5), NAPA_BRASB (A5ED21), NAPA_BRASO (A4Z0A1), NAPA_BURXL (Q13I15), NAPA_CAMC1 (A7ZCK4), NAPA_CAMC5 (A7GZP5), NAPA_CAMFF (A0RQ36), NAPA_CAMHC (A7I3Y7), NAPA_CAMLR (B9KCQ2), NAPA_CITK8 (A8AE11), NAPA_COLP3 (Q487G4), NAPA_CUPNH (P39185), NAPA_CUPPJ (Q46RX3), NAPA_CUPTR (B3R8B4), NAPA_DECAR (Q47A87), NAPA_DESDA (P81186), NAPA_DINSH (A8LLY9), NAPA_ECO24 (A7ZP28), NAPA_ECO27 (B7UFL9), NAPA_ECO45 (B7MFB8), NAPA_ECO55 (B7LAM9), NAPA_ECO57 (Q8XE47), NAPA_ECO5E (B5YWZ7), NAPA_ECO7I (B7NN18), NAPA_ECO81 (B7MXN6), NAPA_ECO8A (B7M5P6), NAPA_ECOBW (C4ZU48), NAPA_ECODH (B1X8A2), NAPA_ECOHS (A8A268), NAPA_ECOK1 (A1AD59), NAPA_ECOL5 (Q0TFN6), NAPA_ECOL6 (Q8CVW4), NAPA_ECOLC (B1IY66), NAPA_ECOLI (P33937), NAPA_ECOLU (B7N5G7), NAPA_ECOSE (B6I1A4), NAPA_ECOSM (B1LKV2), NAPA_ECOUT (Q1R9L3), NAPA_EDWI9 (C5B7B9), NAPA_ERWCT (Q6D5Z2), NAPA_ESCF3 (B7LJU7), NAPA_HAEDU (Q7VPJ7), NAPA_HAEI8 (Q4QNJ6), NAPA_HAEIE (A5UAE1), NAPA_HAEPS (B8F7K2), NAPA_HAES1 (Q0I5G9), NAPA_HAES2 (B0URQ3), NAPA_HAHCH (Q2SGV7), NAPA_HELHP (Q7VJT5), NAPA_LARHH (C1D9G3), NAPA_LEPCP (B1Y6A6), NAPA_MAGMG (Q93HX3), NAPA_MAGSA (Q2W3T1), NAPA_MANSM (Q65Q72), NAPA_METS4 (B0UCB6), NAPA_NAUPA (B9L8L4), NAPA_NITSB (A6Q604), NAPA_PARPN (Q56350), NAPA_PASMU (Q9CKL8), NAPA_PECCP (C6DK59), NAPA_PSEA7 (A6V924), NAPA_PSEA8 (B7UX15), NAPA_PSEAB (Q02IZ4), NAPA_PSEMY (A4XWM0), NAPA_PSEST (Q3HS05), NAPA_PSEU5 (A4VJ11), NAPA_PSYIN (A1SWQ0), NAPA_RALPJ (B2UBL7), NAPA_RHIME (Q92Z36), NAPA_RHOPB (Q21AR4), NAPA_RHOS4 (Q53176), NAPA_SACD2 (Q21PN1), NAPA_SALA4 (B5EYU5), NAPA_SALAR (A9MJZ6), NAPA_SALCH (Q57M92), NAPA_SALDC (B5FNQ2), NAPA_SALEP (B5R233), NAPA_SALG2 (B5RC85), NAPA_SALHS (B4TAT3), NAPA_SALNS (B4SYT3), NAPA_SALPA (Q5PI61), NAPA_SALPB (A9N5G2), NAPA_SALPC (C0Q0P2), NAPA_SALPK (B5BDZ4), NAPA_SALSV (B4TPE6), NAPA_SALTI (Q8Z570), NAPA_SALTY (Q8ZNH6), NAPA_SERP5 (A8GHJ4), NAPA_SHEDO (Q12P44), NAPA_SHEHH (B0TSW5), NAPA_SHEON (Q8EIJ1), NAPA_SHIB3 (B2TV30), NAPA_SHIBS (Q31Z29), NAPA_SHIDS (Q32I06), NAPA_SHIF8 (Q0T2R8), NAPA_SHIFL (Q83QV0), NAPA_SHISS (Q3Z001), NAPA_SYMTH (Q67QZ1), NAPA_VIBC3 (A5EZX9), NAPA_VIBCH (Q9KLR4), NAPA_VIBCM (C3LVU3), NAPA_VIBF1 (Q5E3J6), NAPA_VIBFM (B5FGW1), NAPA_VIBHB (A7N7J3), NAPA_VIBPA (Q87GW6), NAPA_VIBSL (B7VRL0), NAPA_VIBVU (Q8D623), NAPA_VIBVY (Q7MD44), NAPA_WOLSU (Q7M962), NAPA_YERE8 (A1JL26), NAPA_YERP3 (A7FG75), NAPA_YERPA (Q1C5S8), NAPA_YERPB (B2K970), NAPA_YERPE (Q8ZCF3), NAPA_YERPG (A9QZL3), NAPA_YERPN (Q1CK03), NAPA_YERPP (A4TMK8), NAPA_YERPS (Q668I0), NAPA_YERPY (B1JSJ0), NAPG_ECOL6 (P0AAL4), NAPG_ECOLI (P0AAL3), NAPG_SHIFL (P0AAL5), NIRK_RHIME (Q92Z29), NIR_ACHCY (P25006), NIR_ALCFA (P38501), NIR_RHIGA (Q01537), NIR_RHIHE (Q60214), NIR_RHOS5 (Q53239), NOSZ_ACHCY (P94127), NOSZ_BRAJA (Q89XJ6), NOSZ_BRUME (Q8YBC6), NOSZ_BRUSU (Q8FX16), NOSZ_CUPNH (Q59105), NOSZ_PARDE (Q51705), NOSZ_PSEAE (Q9HYL2), NOSZ_PSEAI (Q01710), NOSZ_PSEFL (Q9F0W4), NOSZ_PSEST (P19573), NOSZ_RALSO (Q8XQB8), NOSZ_RHIME (Q59746), NRFC_ECO57 (P0AAK8), NRFC_ECOLI (P0AAK7), NRFC_HAEIN (P45015), NRFC_SHIFL (P0AAK9), NRTA_NOSS1 (Q44292), NRTA_SYNE7 (P38043), NRTA_SYNY3 (P73452), OPD_BREDI (P0A434), OPD_FLAS2 (P0A433), OPGD1_RALSO (Q8XUX6), OPGD2_RALSO (Q8XT53), OPGD_CROS8 (A7MLE5), OPGD_ECO24 (A7ZLL8), OPGD_ECO27 (B7URH4), OPGD_ECO57 (Q8X9V1), OPGD_ECOBW (C4ZVG4), OPGD_ECODH (B1XDD6), OPGD_ECOHS (A7ZZY2), OPGD_ECOK1 (A1AB32), OPGD_ECOL6 (Q8CW34), OPGD_ECOLI (P40120), OPGD_ECOSE (B6IAG9), OPGD_ECOUT (Q1RBZ1), OPGD_ENT38 (A4WAB7), OPGD_KLEP3 (B5XWS2), OPGD_PSE14 (Q48BK0), OPGD_PSEF5 (Q4KHN0), OPGD_PSEFS (C3KDR8), OPGD_PSEPF (Q3KHH5), OPGD_PSESM (Q87TX5), OPGD_PSEU2 (Q4ZL60), OPGD_SALEP (B5R535), OPGD_SALG2 (B5RA57), OPGD_SALPA (Q5PHT4), OPGD_SALPK (B5BJ86), OPGD_SALTI (Q8Z765), OPGD_SALTY (Q8ZPB3), OPGD_SHIB3 (B2U143), OPGD_SHIBS (Q320I8), OPGD_SHIDS (Q32FN2), OPGD_SHIFL (Q83R85), OPGD_SHISS (Q3Z1F4), OPGD_XANAC (Q8PEQ6), OPGD_XANC8 (Q4UNU8), OPGD_XANCB (B0RZ46), OPGD_XANCP (Q8P3C6), OPGD_XANOP (B2SHI0), OPGD_XANOR (Q5H6C7), OPGD_XYLFM (B0U613), OPGD_XYLFT (Q879Z7), OPGG_BRAJA (Q89BU4), P2SAF_ORYSJ (Q5Z5A8), PCOA_ECOLX (Q47452), PHE3_RHDS2 (Q00433), PHFS_DESVH (P07603), PHFS_DESVO (P13628), PHLA_MYCTU (Q04001), PHLB_MYCTU (P95246), PHLC_MYCTU (P95245), PHLC_PSEAE (P06200), PHLD_MYCBO (P0A5R9), PHLD_MYCTU (P0A5R8), PHLN_BURPS (Q9RGS8), PHLN_PSEAE (P15713), PHNS1_DESVH (Q06173), PHNS2_DESVH (P61429), PHNS_DESDA (P13061), PHNS_DESFR (P18187), PHNS_DESVM (P21853), PHSA_SALTY (P37600), PHSS_DESBA (P13063), PLD_STRCW (Q8KRU5), PNAO_PSESP (H8ZPX1), PRTC_STRGR (P52320), PSBU_CYACA (Q9ZQS5), PSBU_GRIJA (Q7XY82), PSRA_WOLSU (P31075), QCRA_BACSU (P46911), QCRA_BACTC (Q45657), SERA_THASE (Q9S1H0), TGAS_STRCJ (Q8GR90), TORA_ECO57 (P58360), TORA_ECOL6 (Q8CW73), TORA_ECOLI (P33225), TORA_PASMU (Q9CK41), TORA_SALTI (Q8Z2M4), TORA_SALTY (Q8ZKZ7), TORA_SHEMA (O87948), TORA_SHEON (Q8EHI9), TORA_VIBCH (Q9KRF0), TORA_VIBPA (Q87QI7), TORA_VIBVU (Q8D8S3), TORA_VIBVY (Q7MLQ2), TORZ_ECO57 (P58362), TORZ_ECOL6 (Q8CVZ3), TORZ_ECOLI (P46923), TORZ_HAEIN (P44798), TTRB_SALTY (Q7CQM9), TYRT_STRAT (P17687), TYRT_STRGA (P55047), TYRT_STRGB (P55046), TYRT_STRLN (P55048), UCRIA_SYNY3 (P74714), UCRIB_ANAVT (Q93SW6), UCRIB_NOSS1 (Q93SW8), UCRIC_NOSS1 (P70758), UCRI_BRAJA (P51130), UCRI_GLOVI (Q7NCE1), UCRI_PARDE (P05417), UCRI_PROM0 (A3PBI5), UCRI_PROM1 (A2C0R9), UCRI_PROM2 (A8G3H7), UCRI_PROM4 (A9BE84), UCRI_PROM5 (A2BVC4), UCRI_PROM9 (Q31C72), UCRI_PROMA (Q7VDC0), UCRI_PROMP (Q7V2L4), UCRI_PROMS (A2BPU5), UCRI_PROMT (Q46GW1), UCRI_RHOCA (P0CY48), UCRI_RHOCB (D5ANZ2), UCRI_RHORU (P23136), UCRI_RHOSH (Q02762), UCRI_RHOVI (P81380), UCRI_RICBR (Q1RIA5), UCRI_RICCN (Q92IR2), UCRI_RICFE (Q4UKR6), UCRI_RICPR (Q9ZDQ5), UCRI_RICTY (Q68XA0), UCRI_SYNPX (Q7U566), UCRI_SYNS3 (Q0I872), UCRI_SYNS9 (Q3AWL7), UCRI_SYNSC (Q3ALY0), XYNC_STRCO (Q9RI72), XYNC_STRLI (P26220), Y1269_MYCTU (P0A5E1), Y1300_MYCBO (P0A5E2), Y1595_HALSA (Q9HPK2), Y2345_DEIRA (Q9RRY7), Y2577_MYCTU (Q50644), Y3270_HALS3 (B0R5Y3), Y4MM_RHISN (P55572), Y4TO_RHISN (P55669), YAGT_ECO57 (Q8X6I9), YAGT_ECOLI (P77165), YAHJ_ECOLI (P77554), YAT5_RHOBL (P05448), YCBK_ECO57 (P0AB08), YCBK_ECOL6 (P0AB07), YCBK_ECOLI (P0AB06), YCBK_SHIFL (P0AB09), YEDY_AGRT5 (P58770), YEDY_ANAD2 (B8J9Q0), YEDY_ANADE (Q2IGN2), YEDY_ANASK (B4UGL0), YEDY_BRUME (P0A4R0), YEDY_BRUSU (P0A4R1), YEDY_BURMA (Q62G98), YEDY_BURPS (Q63Q46), YEDY_CAUCR (Q9A4T2), YEDY_CAUSK (B0SVB3), YEDY_CROS8 (A7MNQ9), YEDY_DEIRA (Q9RRF6), YEDY_ECO24 (A7ZN92), YEDY_ECO27 (B7USY1), YEDY_ECO45 (B7MCM4), YEDY_ECO55 (B7L8Y8), YEDY_ECO57 (Q8XB74), YEDY_ECO5E (B5YSJ7), YEDY_ECO7I (B7NRB1), YEDY_ECO81 (B7MWF7), YEDY_ECO8A (B7M3A9), YEDY_ECOBW (C4ZQP1), YEDY_ECOHS (A8A1H0), YEDY_ECOK1 (A1ACB6), YEDY_ECOL6 (Q8FGI7), YEDY_ECOLC (B1IZU1), YEDY_ECOLI (P76342), YEDY_ECOLU (B7NBW2), YEDY_ECOSE (B6I116), YEDY_ECOSM (B1LQN8), YEDY_ECOUT (Q1RAH1), YEDY_ERWCT (Q6DAI9), YEDY_ERWT9 (B2VGX7), YEDY_ESCF3 (B7LRM8), YEDY_GLUOX (Q5FQ05), YEDY_MAGSA (Q2W2Q1), YEDY_METCA (Q60AK7), YEDY_PECCP (C6DIK7), YEDY_PSEPK (Q88DZ2), YEDY_PSESM (Q888N2), YEDY_RALSO (Q8XV50), YEDY_RHIE6 (B3PWV0), YEDY_RHIEC (Q2K9I8), YEDY_RHISN (C3MB06), YEDY_RUEPO (Q5LNE0), YEDY_SALA4 (B5F7N7), YEDY_SALAR (A9MNV7), YEDY_SALCH (Q57J91), YEDY_SALDC (B5FIV5), YEDY_SALEP (B5R1C0), YEDY_SALG2 (B5REX5), YEDY_SALHS (B4TJV1), YEDY_SALNS (B4SUN2), YEDY_SALPA (Q5PJV7), YEDY_SALPB (A9N876), YEDY_SALPK (B5BGT1), YEDY_SALSV (B4TX85), YEDY_SALTI (P67348), YEDY_SALTY (P67347), YEDY_SERP5 (A8GK68), YEDY_SHIB3 (B2TWL4), YEDY_SHIDS (Q32HK5), YEDY_SHISS (Q3Z0L8), YGB7_CUPNE (Q44018), YKUE_BACSU (O34870), YNFE_ECOLI (P77374), YNFF_ECOLI (P77783)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): AMIA_SALTY (P33772), DHML_METFK (Q50425), DHML_METME (Q59543), DHML_PARDE (P22619), DHML_PARVE (P22641), FHUD_ECOLI (P07822), FTSP_ACTSZ (A6VR21), FTSP_HAES2 (B0UVZ0), HYBA_ECOLI (P0AAJ8), IDIA_THEEB (Q8DLH9), NAPA_BORBR (Q7WIQ1), NAPA_CAMJ8 (A8FLJ3), NAPA_CAMJE (Q9PPD9), NAPA_CAMJJ (A1VZC8), NAPA_CAMJR (Q5HV12), OPGD_STRM5 (B4SRN1), OPGD_STRMK (B2FU50), OPGD_XYLF2 (B2IAA4), OPGD_XYLFA (Q9PA38), PPBD_BACSU (P42251), TTRA_ARCFU (O30078), TTRA_SALTY (Q9Z4S6), YDHX_ECO57 (Q8X616), YDHX_ECOLI (P77375), YEDY_ACTP2 (A3N3C8), YEDY_ACTP7 (B3GZ85), YEDY_ACTPJ (B0BT06), YEDY_ACTSZ (A6VQE0), YEDY_CAMJE (Q9PIC3), YEDY_CHRVO (Q7NZY0), YEDY_HAEDU (Q7VKI8), YEDY_HAES1 (Q0I4C9), YEDY_HAES2 (B0UUL6), YEDY_PASMU (Q9CN98), YEDY_PSEAE (Q9HVA4), YEDY_RHIME (Q92QE7), YEDY_WOLSU (Q7MR39), YEDY_XANAC (Q8PLY8), YEDY_XANCP (Q8PA98), YEDY_YERPE (Q8ZAW9), YEDY_YERPS (Q665F0), YFHG_ECOLI (P0AD44)Sequences which could potentially belong to the set under consideration: A85B_MYCSC (Q50397), CDGT1_BACCI (P30920), CDGT_BACSS (P31747), CYCX_DESDA (P81040), DHET_ACEAC (P18278), FM1_ACTVI (P18477), FTSH6_ORYSJ (Q67WJ2), HAS8_HALS8 (Q9HHA8), HIP_ALLVD (P00260), HIP_RALSO (Q8XUU7), HMC2_DESVH (P33389), IORB_BREDI (Q51698), MAUM_METEA (Q49130), MOXJ_METEA (P16028), NANH_MICVI (Q02834), OPGG_RHOS4 (Q9FA54), TOLB_BRAJA (Q89ED5), TOLB_GLUOX (Q5FQB9), TOLB_JANSC (Q28TS0), TOLB_RHOP2 (Q2IZ40), TOLB_RHOPA (Q6NAR1), TOLB_RHOPB (Q20X63), WCAM_SALTY (P26389), XYNA_THENE (Q60042), XYND_CELFI (P54865)False positive hits (sequences which do not belong to the set under consideration): A85A_MYCAV (O52956), A85A_MYCBO (P0C2T1), A85A_MYCBP (A1KQD8), A85A_MYCTU (P0A4V2), A85A_MYCUL (P58248), GP46_LEIAM (P21978), H2B_LILLO (Q9MBF7), HCY_NATPH (P39442), MMP14_RABIT (Q95220), MURG_MARAV (A1U3F8), PDE4D_DROME (Q9W4T0), SINA_DROWI (Q8I147), Y5695_RALME (Q1LBC2)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
2PQ4; |
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