Entry: PS51329

Forthcoming changes to the profile format
General information about the entry

Entry name [info] C_CAP_COFACTOR_C
Accession [info] PS51329
Entry type [info] MATRIX
Date [info] AUG-2007 (CREATED); OCT-2013 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC51329
Associated ProRule [info] PRU00659

Name and characterization of the entry

Description [info] C-CAP/cofactor C-like domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=139;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=134;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.5213423; R2=0.0085017; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=21607.11751; R2=20.98837; TEXT='HScore';
/CUT_OFF: LEVEL=0; SCORE=998; N_SCORE=10.0; H_SCORE=41964; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=450; N_SCORE=5.4; H_SCORE=29965; MODE=1; TEXT='RR';
/DEFAULT: M0=-42; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-255; BD=-255;
/M: SY='P'; M= -57,-136,-113,-102,-130, -57,-116,-121, -19,-130,-117,-117, 128, -30,-118,-109, -24,-124,-125, -31;
/M: SY='P'; M=  28,-120, -41, -45,-119, -20,  11, -50,  29,  -8,-107, -40,  59, -14,   8,  16,  27, -16,-126,-114;
/M: SY='K'; M=  -1, -15,  20,  11,-119, -61, -29,-113,  56, -39,-109,   3,  -7,  51,  15, -27, -19,   3,   6, -11;
/M: SY='K'; M=   7, -16, -18, -23, -21, -30, -18, -13,  30,  -2,   3,-105,  -4,  10,  13,  29,   9,  -3,   1,  11;
/I:         I=-28; MI=0; MD=-71; IM=0; DM=-71;
/M: SY='E'; M=   8, -10, -53,  51,-125, -20, -13,-122,  27,-121, -10,  19,  33, -12,   9,  37,  15,-117,-128,-116;
/I:         I=-16; MD=-40;
/M: SY='T'; M=  21,-121,-117, -49, -38, -11,-118, -18,  10,  11, -19,-110,-120,  19, -44,  15,  52, -11,   5,-114; D=-16;
/I:         I=-16; MI=0; MD=-40; IM=0; DM=-40;
/M: SY='L'; M=  -5,-125, -53,   4, -17,   9, -16,   8, -56,  26,-102,-117, -11,   2, -48, -12,  -3,  16,-125,  -1; D=-16;
/I:         I=-16; DM=-40;
/M: SY='D'; M=   2, -15,  55,  15, -15, -10,  17, -30, -12, -14, -29,  18,-118,   0,-110,  17,   6, -29,-132,-113; D=-16;
/I:         I=-16; DM=-40;
/M: SY='N'; M=  14,-120,  12, -20, -40,  43,-108, -50,  15,-118,  22,  49, -16, -26,  -7,   1,   8, -18,-128,-116; D=-16;
/I:         I=-16; DM=-40;
/M: SY='D'; M= -19,-120,  45,  22, -50, -55,-104,-118,  21,-121, -19,  44,  12, -24,  16,  38,  25, -30,-131,-115;
/M: SY='K'; M=   8, -14,   4,   3,-123, -58, -17, -27,  52,-118, -28,  33,-114,  43,  29,   8,  25, -53,-127,-113;
/M: SY='W'; M=-115,-130, -17,-118,  11, -33,  12,  10,-112,  -9,-102,-120, -14, -30,   5, -51, -49,  11, 134,  61;
/I:         I=-13; MD=-34;
/M: SY='T'; M= -63, -21, -22, -22,  30,-121,-116,  18, -63, -59,-101, -17, -37, -27,  -6,  16,  58,  53,-124, -27; D=-13;
/I:         I=-13; MD=-34;
/M: SY='I'; M= -32,  -1,-129,-126,   6, -59,-128,  71, -30,  10, -90, -42,-125,-122,-124,-116, -17,  59,-125,-106; D=-13;
/I:         I=-13; MD=-34;
/M: SY='E'; M=   0,  30, -16,  57,-126, -65,  -5, -29,  18,-121,-114, -34,  -9,  52, -27,  25,  -8, -48,-129, -37; D=-13;
/I:         I=-13; MI=0; MD=-34; IM=0; DM=-34;
/M: SY='N'; M=-109,-120,  34,-104,   1,  17,  14,-122, -51, -63,-115, 102,-120, -11,-108, -12,  -5,-123,-130,   6; D=-13;
/I:         I=-13; DM=-34;
/M: SY='Q'; M= -16,-122, -44, -26,  28,-122,   4,  10,  31,  23,  11,-110,-121,  48,   8, -27,-108,  -9,   4,  43;
/M: SY='H'; M=   6,-121, -30,  36, -44, -62,  55, -24,  34, -25,-106, -17,-114,  36,   7,   2,  27, -26,-124,  -4;
/M: SY='N'; M=-105, -21,  57, -47, -43,  52,-104,-126,  16,-127,-119,  68, -12,  -2,-106,  16,-103, -53,-129, -28;
/I:         I=-9; MD=-23;
/M: SY='E'; M= -28,  30,   3,  55,-126, -33, -15, -25, -36, -51,-115,   8, -41,  44,   0,  11,  18, -59,  -1,-118; D=-9;
/I:         I=-9; MD=-23;
/M: SY='T'; M= -32,-125, -45,  -7, -40, -61,  30,   2,  19, -44,-109, -10,  31,   1,  -2,   6,  41,  11,-133,-115; D=-9;
/I:         I=-9; MD=-23;
/M: SY='I'; M= -48, -15, -54, -19, -15,-128, -16,  47,-119,  20, -15,  24, -44,-117, -44,   0, -22,  29,-128,  -5; D=-9;
/I:         I=-9; MD=-23;
/M: SY='I'; M= -23,-127,  -2, -59,-110, -42,-124,  48, -30,  16,-100, -37, -16, -42, -56, -11, -17,  35,-130,  -5; D=-9;
/I:         I=-9; MI=0; MD=-23; IM=0; DM=-23;
/M: SY='K'; M=-120,-134,   8,  -7, -40,-132,-120,  -2,  48, -18,-113,-116,  15, -23,  10, -25, -49,  18,-132,  -3; D=-9;
/I:         I=-9; DM=-23;
/M: SY='S'; M= -23,-127,  12,   7, -37,-123, -18,   5, -12,   0, -16, -47,   5, -12, -27,  34,   4,  -1,-135,-117; D=-9;
/I:         I=-9; DM=-23;
/M: SY='P'; M=   8,  12,  24,   9, -15,  -7,-119,  15, -52, -46,-116,-111,  35,-112, -23,  30, -23, -53,-131, -29; D=-9;
/I:         I=-9; DM=-23;
/M: SY='E'; M= -12, -21, -16,  46, -11,  24,-114, -32,  18, -63, -18,   1, -37, -35,-110,  22, -45, -18,-128, -21; D=-9;
/I:         I=-9; DM=-23;
/M: SY='T'; M= -14,   2,   7, -16,-118, -12,-117,  16, -10,  -2, -13,   4, -20,  -7, -27,  14,  31,   5,-133,-117; D=-9;
/I:         I=-9; DM=-23;
/M: SY='E'; M=  -8,-125,  22,  34,-120, -55,  23,  -1,  -9,   2,-109,  33, -36,   0,-112,  -3,   9,  -2,-135,-116; D=-9;
/I:         I=-9; DM=-23;
/M: SY='D'; M=  13,-121,  45, -49,-114, -55,  24,  11,   0,  12,  43,  10,   0,-107,-112,  26, -44, -12,-131,-112; D=-9;
/I:         I=-9; DM=-23;
/M: SY='G'; M= -54,  29,   8, -19, -16,  40,  27, -53,  29, -14,-109,  21,-116, -39, -31,  35,   6, -14,-127,-111;
/M: SY='Q'; M=   0,-122,   5,  10,-122,  10,  41,-112, -12, -41,-108,  14, -15,  74,  -3,   1,  -1,  11,-128,-111;
/M: SY='S'; M=  -1, -22,  41,  -6,-122, -42,-107, -24,  -8, -61,-112,   5,   3,  23,   1,  55,  34, -23,-131,-115;
/M: SY='V'; M= -22, -14,-130,-125,  38, -67,-123,  29,-123,  30, -88,-125,-127,-123,-123,-115,-104,  78,-118,   9;
/M: SY='C'; M= -21,  34,-111, -46,  32, -56,  23,  -7,  21, -13, -37,  24,-120,  16, -19,   2,  28,  17,-118,  21;
/M: SY='I'; M=   7,-119,-129,-125, -12, -75,-124,  83,-123,  40,   6, -28,-124,-119,-124,-116,-106,  22,-121,-103;
/M: SY='E'; M=-107,-122,   3,  52,  26, -35,  24, -25,  12, -38, -21,-101,-114, -10,  24,  24,  34,-111,-117,  25;
/M: SY='N'; M=-108,-122,  47,  -8,-125,   8, -14,-127,  22,-128,-117,  88,-117,   7,  39,  -2,-102,-125,-132, -34;
/M: SY='C'; M=-110, 133,-130,-127,-104,-128,-125,  21,-124,  47, -96,-120,-134,-126,-127, -49,-108, -13,-134,-115;
/M: SY='S'; M= -19,-118,  20,  27, -36,-111,  44,-113,  37,-116, -22,  13,-113,   0, -41,  51,  28,   5,-130,-110;
/M: SY='N'; M= -31,-121,  47,  16,-126, -54,  26,-125, -21,-125, -17,  86, -35,  32,  30,  12,-101,-123,-135,-114;
/M: SY='C'; M= -25, 131,-116,-117,-119, -31,-119,-119,-115, -66,-114,-104,-124,-115,-121,  59,  35, -56,-139,-121;
/M: SY='T'; M=  -7,-116, -46, -12, -10, -57, -15,   2, -14,  -3, -22, -10,-117, -11, -19, -12,  64,  38,-122,  13;
/M: SY='I'; M=-108,-120,-133,-129,  13,-135,-131,  90,-125, -28, -13,-125,-124,-124,-127,-119,-104,  68,-122,-102;
/M: SY='Y'; M=-111,-123,  -5,  -6,  15,-122,   8,  12,  -1, -14, -99, -10,-121,  49,  -9, -48,   9,  13,-106,  80;
/M: SY='I'; M=  -7, -19,-130,-125,   3,-130, -16,  75,-123,  26,  10,-123,-125,-120,-124,-116,-105,  52,-119,   0;
/M: SY='P'; M= -35, -17,  21,   2,   9, -34,   3, -48,  33,  27,-103,   8,  38,  19,-104,  -2,   5, -52,-122, -38;
/I:         I=-20; MD=-50;
/M: SY='G'; M=  -9,  10,  51, -52, -41,  64, -19,-120,-110, -33,-115,  25, -16, -29, -46,  11,-106, -15,-128, -32; D=-20;
/I:         I=-20; MI=0; MD=-50; IM=0; DM=-50;
/M: SY='K'; M= -33, -13, -41, -45,  -5, -55,  39, -26,  60, -41,-106, -14,  48,  -5,  -8,  10,  -2,  18,-125,-109;
/M: SY='V'; M=   2,  20,-120, -47,  29,-120,-117,   4,-116,  14,  12, -12,  32,-115,-119,   3,   4,  54,-120,  -4;
/M: SY='N'; M=  -5,-121,  24,   9,-124,  20,  26,-125,  11,-125, -17,  67, -10, -97,  27,  33, -55,-121,   1,-114;
/M: SY='S'; M=  43,-115,-107,-106,-113, -30,  12, -50, -50,-117,-110, -13, -12,   7, -42,  70,  42,-108,-120,  36;
/M: SY='V'; M=  -7, -13,-129,-124, -12,-129,-126,  57,-122,  35, -15,-123,-125,-121,-124,-114, -17,  70,-125,-104;
/M: SY='T'; M= -52,  14, -45, -46,  53,-117,  27, -13, -48, -26,   7, -35,-118,  21,  -8,  33,  57,  -1,-117,  -7;
/M: SY='I'; M= -34,-119,-131,-125,  15,-132,-123,  67,-123,  53,  21,-125,-126, -30,-123,-119,-106,  44,-120,-100;
/M: SY='D'; M= -37,-120,  68,   3,-119,-111,  26,-117,  -1, -39,-113,  21,-114,   1,  10,  41,  30, -26,-131,  -4;
/M: SY='N'; M= -34,-122,  43,  -9, -42,  23,  29,-127,  40,-126,-116,  75,-116,   8,  21, -12,-103,-124,-130,-113;
/M: SY='C'; M= -10, 135,-126,-124,-109,-123,-124,   0,-122,  19, -15,-116,-131,-124,-126, -37,  -7,   7,-137,-118;
/M: SY='T'; M= -55,-120,-103,  27, -48,-117,   8, -63,  52,-113,  -6, -41,-112,  33,  31,   5,  57,   9,-125, -39;
/M: SY='N'; M=-111,-124,  70, -46,-125,  -5,  11,-128,  47,-127,-118,  75,-116, -10,  35, -55,-104,-126,-132, -18;
/M: SY='C'; M= -55, 126,-118,-118,-116, -61,-120, -46,-116, -51,   2,-107,   6,-117,-122,  42,  42,   0,-138,-120;
/M: SY='T'; M= -57,-119,-107,  15,-113, -21,-109,  12,  32,   1,-102, -12,-115,  32,   8,  25,  45,  10,-124, -29;
/M: SY='V'; M=-109,-118, -45, -49,  29,-132,-124,  45,-123,  48, -21,-125,-127,-121,-123,-119,-105,  68,  20, -99;
/M: SY='V'; M=  -3,-118,-124, -57,  37,-124,-117,  50,-116,   7, -16,-118,-123,  -4, -44,   5, -42,  54,-114,  31;
/M: SY='C'; M= -55,  67,-130,-125,  53,-130, -16,  14,-123,  42,  -7,-123, -35,-123,-123,-117, -46,  58,-119, -97;
/I:         I=-21; MD=-53;
/M: SY='G'; M=  -8,-124,  43, -23,-123,  65,-114,-120,-112,  -5,-115,   7, -37, -39, -46,   0, -14, -30,-129, -29; D=-21;
/I:         I=-21; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='P'; M=  26,  14,  21, -22,-128,-115,-114,-125,-109,-128,-120,  16,  57,  21, -19,  25,  12, -64,-133,  -2; D=-21;
/I:         I=-21; DM=-53;
/M: SY='V'; M=  19,  23,-126,-121, -31,-123,-124,  16, -52,   9,  30,-119,-124,-118,-121,   2,  -5,  70,-130,-110; D=-21;
/I:         I=-21; DM=-53;
/M: SY='C'; M=  27,  43,  -2,   2,-115,   4,-114,  30,   1, -58, -20, -35,-118,  -5,  18,   9, -43,  29,-127,-114;
/M: SY='G'; M=  -8,-119,-108,-109, -42,  63,   6,-121, -47,-120,   7,   7,-116,  -2,  35,  50,   5, -54,-123, -21;
/M: SY='S'; M=   4,  -6,-108, -20,-119,  -3,-110,   0,-105, -62, -21,-100,  -7,  50, -42,  77,   8,  -2,-127,-113;
/M: SY='V'; M= -21,  -4, -37,-122,  22,-128,-124,  52,-120,  21, -21,-121,-125,-120, -45, -48, -21,  72,-123,-102;
/M: SY='H'; M=-113,-124,  36,  28,  53,-122,  60, -19, -99,   7,-103,-104,-120, -28,  49,  -7, -14, -51,   5,   0;
/M: SY='I'; M= -37,-118,-131,-126, -25,-132,-126,  74,-123,  22,  37,-124,-124,-121,-124,-116, -30,  67,-124,-104;
/M: SY='H'; M= -65,-121,  10,  40, -40,-119,  49,  15,  -6, -43,-104,   9,-115,  10,  35,  -8,  36,  18,-129,-108;
/M: SY='D'; M= -56, -14,  72,   4,-126,  20, -16,-127,  24,-126, -21,  66,-115,  -6, -26,   7, -43,-124,-133, -31;
/M: SY='C'; M=-106, 147,-126,-125,-115,-122,-126, -27,-122, -27,-110,-113,-134,-126,-127,  11, -38,   3,-143,-123;
/M: SY='E'; M= -10,-123,  -2,  45,-120, -57,  28, -51,  38, -66, -22,  27,  19,  42, -25, -16,  18, -32,-125,  -5;
/M: SY='N'; M= -63,-120,  41, -53,-123, -23,  50,-124,   0, -38,-114,  92,-118, -27,  36,  19,-100,-123,-136,-112;
/M: SY='C'; M=-104, 101,-123,-121,  26,-122,-121,  16,-118, -38,   9,-113,-125, -27,-121,  28,  14,  57,-127, -48;
/M: SY='K'; M=   1,-121,   7,  41,-122, -22,  28, -49,  47,-116,-110, -34,-112,  29,  12, -45,  44,   8,-128,-112;
/M: SY='I'; M=-109,  21,-132,-127,  30,-133,-126,  68,-124,  28,  21,-125,-126,-123,-125,-119,-105,  64,-121,-100;
/I:         I=-8; MD=-19;
/M: SY='Q'; M= -12,  27, -41,-106, -40,-120,  39,  -4,-107,  -3, -22,-109,-122,  72, -43,  -4,   5,  31,-115,  58; D=-8;
/I:         I=-8; MD=-19;
/M: SY='V'; M=  25,  54,-125,-121,-105, -61,-125,  33,-120,   9, -16, -36,-124,-119,-123, -53,  14,  68,-131,-111; D=-8;
/I:         I=-8; MD=-19;
/M: SY='A'; M=  48,-119, -51,   6, -39, -55, -19,   1,-111,  10,   0, -15, -46, -41, -17,  25, -22,  -5,   4,  -1; D=-8;
/I:         I=-8; MD=-19;
/M: SY='C'; M= -63, 119,-125, -60,-129,  33,-128,-129, -52, -63, -22, -17,-134,  -9,-129, -52,  15, -55,-145,-132; D=-8;
/I:         I=-8; MD=-19;
/M: SY='H'; M=-136, -16,-133, -63,-149,   4,  60, -55,   3, -72,-134, -37,-145,  38,  20,-131,-138, -60,-155,-133; D=-8;
/I:         I=-8; MI=0; MD=-19; IM=0; DM=-19;
/M: SY='C'; M=   7,  52,-135,-133, -52, -59,-138,-116,-131, -69,-124,-126, -46,-131, -58,  34,  20,  34,-150,-132; D=-8;
/I:         I=-8; DM=-19;
/M: SY='T'; M=  38, -15,-118,-115,-121,-117,-120, -36,  -9, -26,-111, -35, -12, -16, -26,  34,  45,  11,-133, -33; D=-8;
/I:         I=-8; DM=-19;
/M: SY='P'; M= -49, -24, -10, -20,-130,-114,-112,-126,  19,-128,-119, -40,  67,  25,   7,  57,  27,-122,-133,-122; D=-8;
/I:         I=-8; DM=-19;
/M: SY='R'; M= -32,-120, -45, -47, -42, -15,  -7,-113, -43, -62,  37,  -9, -43,  59,  60,  12,  56, -55,-123,  -3;
/M: SY='P'; M= -25,-122,-125,-117,   3,-125,-122,  48,-119,  36, -92,-123,  78,-118,-123, -26,-105,  39,-122,-108;
/M: SY='I'; M= -69, -15, -52,-115, -14,-124,  12,  72, -27,  -9, -15, -15,-120,  -3,  16,  16,   3,  28,-125,-105;
/M: SY='I'; M= -16, -11,-131,-127, -98,-132,-129,  93,-124,  17, -21,-123,-123,-121,-126,-117, -35,  41,-124,-106;
/M: SY='E'; M= -31,-125,  56,  83,-125,-116,  51,-123, -43, -37, -18,   1, -42,  -8, -19, -12, -42, -55,-133,-113;
/M: SY='D'; M= -23,  11,  68, -18,-126, -59,  13,-125,  38, -73,-117,  62,-115,   8,  -6,  23,  -8,-121,-135,-115;
/M: SY='C'; M=-100, 124,-114,-116,-117,-113,-118, -43,-113,-115,-113, -41,-122,-113,-119,  67,  45,  -8,-139,-119;
/M: SY='D'; M= -61,-120,  63,  -9, -47,-115,  48, -12,  16, -57,-110,   7,-114, -28,  18,  12,  54, -35,-131, -27;
/M: SY='N'; M= -18,-120,  36,   4,-127,  55,   9,-128, -14,-128,-118,  64,-115, -30,  -2,  33, -30,-123,-131,-117;
/M: SY='C'; M= -30,  86,-127,-124,-104,  -1,-124,  51,-121,   9,  47,-118,-125,-120,-124, -54, -17,  54,-129,-110;
/M: SY='R'; M= -20,-120, -39,   6, -41, -62,  35, -28,  -1,-115, -33,  33,-114,  48,  54,   0,  53, -29,-128,-109;
/M: SY='F'; M= -62,-119,-133,-128,  92,-132,-122,  62,-125,   3, -15,-124,-127,-127,-125,-119, -42,  35,-106, -85;
/I:         I=-9; MD=-23;
/M: SY='Y'; M=  -3,-129,-118,-120,  32,  44,  63, -55, -54,-115,-110, -37,-127,-112,   1, -48,-116,-119,-104,  88; D=-9;
/I:         I=-9; MD=-23;
/M: SY='C'; M= -31,  58,-136, -30,-124,-140, -21,   0, -57,  20,-113, -38,  47,-131, -46,-129,-124,   5,-143, -37; D=-9;
/I:         I=-9; MI=0; MD=-23; IM=0; DM=-23;
/M: SY='C'; M= -20,  30,-130, -25, -48, -10,   7,-130,-127, -30,  -8,   2, -31, -51, -24, -13,  19, -36,-143,   5; D=-9;
/I:         I=-9; DM=-23;
/M: SY='L'; M= -34,  11, -53, -50, -53, -66,-119,   5, -55,  32,  26,   4,   8, -35,-123,  -1,  17, -30,  -3,  27; D=-9;
/I:         I=-9; DM=-23;
/M: SY='S'; M= -43, -13, -22, -27,  11,-118,-112,-122, -16, -65, -17,  43,  -5,   8,   6,  47,   5, -56,   3,   3; D=-9;
/I:         I=-9; DM=-23;
/M: SY='Y'; M=-115,  -7,  -9, -25,-108, -57,-106,-124,  31, -49,-116,  18, -47,  13,   9,  28,  -3,-123,-115,  76; D=-9;
/I:         I=-9; DM=-23;
/M: SY='P'; M=   7, -31,  25,  24,-134, -35, -18, -29,  18,-130,-122, -13,  75,-108, -14, -30,-112, -69,-136,-127; D=-9;
/I:         I=-9; DM=-23;
/M: SY='P'; M= -11, -25, -18,  15,-125,   7,-117,  -1,-114,  -9, -32,  18,  48, -16,-120,  40, -24, -54,-134,-123; D=-9;
/I:         I=-9; DM=-23;
/M: SY='I'; M= -65, -15,-128, -33, -18,-134, -22,  49, -16,  47, -16, -42,-130,   8, -54, -44, -49,   5,-126, -24; D=-9;
/I:         I=-9; DM=-23;
/M: SY='I'; M= -46,-129,  -7,  18, -40, -51,  21,  35, -23,  -8, -21,  12,-125,  22, -18, -25, -46,   3,-125,  32; D=-9;
/I:         I=-9; DM=-23;
/M: SY='C'; M=  17,  59,  16,  49, -31,   9,-114,-120, -56, -79,-116,-105,-117,  28, -42,   8,  23, -18,-132,-119; D=-9;
/I:         I=-9; DM=-23;
/M: SY='D'; M= -66,-128,  71,  37,-129, -58,  52,-126, -47,-125,-118,  20, -15,  53,   7,   2,-107, -29,   3,-113; D=-9;
/I:         I=-9; DM=-23;
/M: SY='I'; M= -34,  50,-125,-123,  36,-125,-118,  56,-120,   6,  52,   2,-125,-118,-122,  -5,   9,  15,  18,  -4; D=-9;
/I:         I=-9; DM=-23;
/M: SY='V'; M= -22,-121, -40,   5,  -6, -61,   9,   0,  26, -61,-104, -34,  24,  -8,  29,  18,  11,  29,-120,  20;
/M: SY='T'; M=   9,-118,  21,  -4,-123,  10,-108,-118,  28,-119,  11,  -9,   5,   0,  -4,  38,  56,-113,-128,-115;
/M: SY='S'; M=  44,   2, -39, -51,-114, -52,   6,  10,-110, -17, -25,-106,   6, -29, -40,  62, -40,  28,-128,-112;
/M: SY='Q'; M=-106, -24,-110, -45,  28,  37,  12, -13,  42, -26, -12, -38,-117,  51,   8,  11,   0, -34,-118, -26;
/M: SY='L'; M= -18,  -7,-117, -24,  17,-118,-113,  -2,-115,  56, -14, -36,-121, -32,-116,  47,  14,  -1,-119,  -6;
/M: SY='S'; M=  46,-115,  30, -23, -16, -51,-107, -55,-104, -63, -18,  20, -37,-102, -20,  67,  20,-109,-126, -28;
/I:         I=-10; MD=-27;
/M: SY='P'; M= -35, -14, -17,  41,-130,  -7,-116,  -4, -30, -66,-118, -32,  81, -31,-116,  35, -51,-119,-132,-125; D=-10;
/I:         I=-10; MD=-27;
/M: SY='Y'; M= -38,-130, -20,  -9,  12,-130, -22,  16, -13,   2,  34,   4, -40, -30, -41,-118, -18, -11,   1,  64; D=-10;
/I:         I=-10; MD=-27;
/M: SY='N'; M=-115,-125, -15, -24,-131, -33,  11, -52,-105,-131,-122, 101,-126,  -4, -18, -21,  13, -32,-146,-123; D=-10;
/I:         I=-10; MD=-27;
/M: SY='I'; M= -22,-136, -46, -26, -15,-141,-137,  50, -55, -10,-110, -43, -12,-130, -47, -58,  -2,  21,-140,-123; D=-10;
/I:         I=-10; MI=0; MD=-27; IM=0; DM=-27;
/M: SY='N'; M=  -8, -26,-123, -48,  -4,-129, -24, -19, -53, -23,-118,  32,  27,  -9,  14, -25,  14, -14,-138, -40; D=-10;
/I:         I=-10; DM=-27;
/M: SY='Y'; M= -12,-130,  -1, -10,-109, -15,-114, -19,-118, -63, -13, -37,  -4,   6,-122,  14,   6,  13,  -8,  66; D=-10;
/I:         I=-10; DM=-27;
/M: SY='P'; M=   8,-128, -43,  31, -38, -37,-116, -55,   0, -30, -27, -36,  52, -11,-114,  28,  17, -57,-131, -29; D=-10;
/I:         I=-10; DM=-27;
/M: SY='N'; M= -54,-119,   1, -28,-122,  31,   6,-122,  30,-124, -20,  91,-116,  -4, -45,  -7,  14, -55,-130, -26;
/M: SY='E'; M=  -8, -26,  30,  37,-116, -52,   7,-109, -18,  20,  37,  35,  12,  26,  -4,  -9, -13, -53,-128,-112;
/M: SY='W'; M= -18,-127,  51,  20,  34, -62,  14, -53, -22, -43,  -7, -20, -39,-106,-111,  -5, -52,-116, 121,  41;
/M: SY='D'; M=  10,-120,  43,  35, -42,  34,  27, -29, -51, -41,-112,  14,-113,  12, -47,  24,   9, -59,-129,-113;
/M: SY='D'; M= -18, -15,  77,  29, -31, -69,  60,-126, -49,-123,-116,  25, -36,  51, -19, -15,   8,-122,-134,-110;
/M: SY='V'; M=-108,-118,-129,-123,   7,-130,-117,  25, -47,  32,  23,-124, -45,-119,-120, -50,-105,  73,  29,  50;
/M: SY='D'; M=  -1,-123,  64,  33, -24,-116,  41, -26, -26,  -8,-107, -35, -33,  10,  -2, -12, -14,  -5,-124,  22;
/M: SY='D'; M= -50, -17,  94,  73,-131,-115,-102,-129, -10, -72,-122, -17, -32, -30,-104, -22, -42,-124,-137,-118;
/I:         I=-22; MI=0; MD=-57; IM=0; DM=-57;
/M: SY='F'; M= -11,-119,-125,-122,  98, -58,   8,  -7,-117,   0, -96, -27,-127, -48, -16,-113,  -7,  12,-100,  28;
/M: SY='T'; M=  40,-118,  -2, -21, -41,   4,-109,-118,  18, -69,-112,  31,  45,  -8, -23,   2,  49,-112,-127,-116;
/M: SY='W'; M= -55,-128,-124, -16, -36, -58,  -7,  24, -63,  14,-100, -11,  42, -42,-119, -49,-111,  34, 131, -95;
/I:         E1=0; IE=-255; DE=-255;
» More

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 0
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] C-CAP/cofactor C-like
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

ACAP1_ARATH (O65902), CAP1_BOVIN  (Q3SYV4), CAP1_HUMAN  (Q01518), 
CAP1_MACFA  (Q4R4I6), CAP1_MOUSE  (P40124), CAP1_PONAB  (Q5R8B4), 
CAP1_RAT    (Q08163), CAP2_HUMAN  (P40123), CAP2_MOUSE  (Q9CYT6), 
CAP2_PONAB  (Q5R5X8), CAP2_RAT    (P52481), CAP_DICDI   (P54654), 
CAP_HYDVD   (P40122), CAP_SCHPO   (P36621), CAP_YEAST   (P17555), 
TBCC1_BOVIN (A4IF93), TBCC1_CHICK (Q5ZKT1), TBCC1_DANRE (A4QP31), 
TBCC1_HUMAN (Q9NVR7), TBCC1_MOUSE (Q640P7), TBCC1_RAT   (Q5FVR8), 
TBCC1_XENLA (Q08AV6), TBCC1_XENTR (A1L0Z4), TBCC_ARATH  (Q9SMR2), 
TBCC_BOVIN  (Q3SZE9), TBCC_DICDI  (Q54PY1), TBCC_HUMAN  (Q15814), 
TBCC_MOUSE  (Q8VCN9), TBCC_PONAB  (Q5R5J7), TBCC_SCHPO  (Q9P3T8), 
TBCC_YEAST  (P46670), XRP2_CHICK  (Q5ZHN4), XRP2_HUMAN  (O75695), 
XRP2_MOUSE  (Q9EPK2), XRP2_XENLA  (Q8AVX5)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

CAP1_PIG    (P40125)

		
PDB
[Detailed view]
7 PDB

1K4Z; 1K8F; 1KQ5; 2BX6; 2YUH; 3BH6; 3BH7

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission