PROSITE entry PS51403
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General information about the entry
| Entry name [info] | NC1_IV |
| Accession [info] | PS51403 |
| Entry type [info] | MATRIX |
| Date [info] |
01-AUG-2008 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51403 |
| Associated ProRule [info] | PRU00736 |
Name and characterization of the entry
| Description [info] | Collagen IV carboxyl-terminal non-collagenous (NC1) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=224; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=219; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=4.0225711; R2=0.0080653; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-9033.5957031; R2=20.7676735; PRIORITY=1; TEXT='Heuristic 0.5%'; /CUT_OFF: LEVEL=0; SCORE=556; H_SCORE=2513; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=308; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-56; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='G'; M= -63, -88, -76, -88, -91, 86, -82, -95, -82, -31, -83, -8, -82, -79, -88, -63, -79, -92, -87, -88; /M: SY='F'; M= -85, -85, -97, -94, 95, -95, -22, -3, -89, -26, -60, -88, -97, -94, -87, -85, -78, -22, -56, 35; /M: SY='L'; M= -20, -82, -91, -87, -7, -92, -79, 6, -85, 47, -50, -87, -91, -82, -85, -78, 5, 14, -78, 30; /M: SY='F'; M= -81, -85, -97, -91, 68, -98, -83, 24, -85, 38, -52, -90, -95, -87, -8, -86, -76, -20, -71, -51; /M: SY='T'; M= 5, -76, -79, -78, -74, -83, 20, -50, -76, -64, -63, -71, -80, -78, -81, -60, 63, 56, -99, -74; /M: SY='R'; M= -76, -90, -76, -65, -75, -88, -68, -73, 46, -12, -10, -70, -85, -58, 72, -74, -73, -7, -82, 9; /M: SY='H'; M= -79, -92, -64, -63, -79, -81, 135, -96, -67, -79, -65, -54, -80, 9, -62, -69, -78, -96,-111, -49; /M: SY='S'; M= -53, -75, -67, -68, -15, -62, -70, -82, -68, -85, -80, -56, -75, -61, -73, 93, 0, -75, -90, -73; /M: SY='Q'; M= -70, -96, -66, -45,-100, -78, -59, -86, -51, -82, -69, -62, 3, 118, -52, -60, -72, -88, -83, -72; /M: SY='T'; M= -43, -74, -15, -69, -2, -73, -74, -74, -68, -77, -74, -34, -73, -69, -39, 46, 81, -67, -92, -72; /M: SY='T'; M= -67, -80, 41, 14, -80, -81, -75, -17, -66, -72, -71, -61, -75, -67, -17, -16, 65, 19, -99, -77; /M: SY='Q'; M= 6, -84, -21, 34, -82, -6, 16, -78, -25, -79, -73, 2, -76, 44, -29, -41, 10, -11, -87, 1; /M: SY='V'; M= -47, -85, -40, 20, -72, -30, -83, 44, -76, -51, -60, 3, 29, -74, -82, -73, -66, 45, -92, -76; /M: SY='P'; M= -77,-101, -78, -67, -92, -80, -80, -80, -74, -30, -77, -84, 114, -77, -86, -75, -70, -86, -89, -92; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='Q'; M= -33, -81, -26, 29, -84, -73, -43, -77, -59, -54, 12, -60, -19, 56, -17, 43, 35, -57, -89, -74; /M: SY='C'; M= -71, 144, -91, -91, -81, -86, -91, -88, -87, -79, -79, -77,-102, -94, -93, -73, -71, -75,-111, -92; /M: SY='P'; M= -54, -99, -74, -18, -95, -77, -78, -83, -71, -93, -79, -81, 115, -73, -83, -47, -68, -87, -88, -92; /M: SY='P'; M= 35, -82, -45, 34, -70, -16, -45, -6, -67, -33, 25, -11, 40, -5, -61, -44, -52, -38, -87, -77; /M: SY='G'; M= -62, -84, 14, -18, -85, 75, -72, -92, -72, -90, -82, 18, -77, -70, -79, -34, 3, -87, -84, -6; /M: SY='M'; M= -17, -75, -72, -71, -63, -76, 30, -62, -68, -39, 74, -63, -74, -31, -48, 3, 69, -61, -79, 36; /M: SY='N'; M= -38, -79, 7, -43, -76, -74, -68, -34, -22, -1, -65, 37, 29, 4, -13, 10, 32, -3, -91, -74; /M: SY='K'; M= -73, -87, -70, -22, 13, -81, -46, -46, 49, -17, 3, -66, 35, 40, 40, -68, -34, -74, -78, -66; /M: SY='L'; M= -73, -78, -91, -84, -51, -93, 12, -10, -84, 73, 10, -88, -90, -78, -82, -83, -70, 9, -82, -61; /M: SY='W'; M= -81,-100, -94, -81, 6, -83, -78, -75, -22, -72, -72, -90, -87, -3, -75, -82, -85, -85, 149, 69; /M: SY='T'; M= -65, -79, 46, 31, -53, -76, 3, -67, -63, -32, -39, -7, -73, -62, -40, 6, 49, 11, -96, -73; /M: SY='G'; M= -60, -87, -75, -86, -90, 91, -81, -96, -80, -41, -82, -61, -79, -78, -87, -60, -78, -91, -84, -87; /M: SY='Y'; M= -82, -44, -82, -84, 31, -89, -51, -67, -74, -62, -61, -82, -94, -73, -17, -77, -76, -71, -40, 116; /M: SY='S'; M= -51, -74, -66, -67, -84, -59, -69, -84, -67, -88, -81, -54, -74, -59, -71, 98, -46, -76, -93, -76; /I: I=-30; MD=-77; /M: SY='L'; M= -80, -84, -95, -88, -11, -97, -77, -27, -88, 68, -45, -94, -12, -83, -86, -88, -76, -37, -75, 31; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='L'; M= -46, -80, -94, -87, -56, -94, -82, -44, -88, 70, -44, -92, -94, -82, -86, -27, -72, 13, -86, -67; /M: SY='Y'; M= -79, -89, -84, -83, 43, -17, -59, -67, -78, -62, 41, -79, -91, -8, -77, -38, -20, -71, -51, 95; /M: SY='V'; M= -43, -81, -87, -87, -16, 0, -86, 2, -84, 20, -37, 2, -90, -83, -86, -47, -67, 57, -90, -71; /M: SY='Q'; M= -70, -91, 5, 45, -93, 1, -67, -42, -59, -81, -24, -28, -76, 78, -64, -64, -5, -30, -90, -79; /M: SY='G'; M= -25, -88, -77, -87, -95, 89, -83,-101, -82, -97, -87, -63, -80, -79, -89, -61, -79, -94, -86, -90; /M: SY='N'; M= -29, -82, -11, -61, -86, -68, 34, -76, -60, -82, -72, 84, -54, 58, -64, -31, -62, 0, -98, -74; /M: SY='E'; M= -69, -88, 56, 71, -94, -3, -65, -94, -18, -90, -85, -25, -71, -41, -65, 3, -67, -88, -95, -82; /M: SY='R'; M= -75, -90, 15, -59, -74, -84, -10, -76, 33, -37, -69, -64, -82, 20, 68, -70, -71, -9, -80, 27; /M: SY='A'; M= 66, -74, -76, -72, -81, -6, -77, -73, -73, -9, -69, -69, -29, -69, -77, 33, -30, -65, -87, -79; /M: SY='H'; M= -74, -86, -68, -68, -32, -82, 124, -71, -71, -71, -62, -58, -81, -63, -67, -29, -19, 24,-106, -52; /M: SY='G'; M= -62, -81, -62, -76, -89, 65, -20, -91, -70, -92, -82, 65, -79, -69, -77, 10, -2, -87, -92, -83; /M: SY='Q'; M= -69, -92, -67, -48, -91, -78, -58, -77, -53, -71, 54, -62, -77, 115, -53, -61, -72, -80, -82, -69; /M: SY='D'; M= -78, -91, 109, -32, -98, -74, -63, -96, -65, -95, -94, -45, -77, -64, -73, -66, -67, -93,-113, -81; /M: SY='L'; M= -77, -79, -94, -86, -51, -96, -78, -42, -88, 81, -38, -94, -61, -81, -85, -87, -73, -50, -81, -64; /M: SY='G'; M= -59, -87, -74, -86, -93, 93, -81,-101, -80, -96, -85, -60, -78, -77, -87, -59, -78, -94, -84, -88; /M: SY='T'; M= -25, -80, -4, -64, -17, -78, -14, -69, -44, 8, -64, -63, -78, 54, -34, 4, 56, -68, -85, -15; /M: SY='A'; M= 64, -79, -79, -70, -81, -67, -79, -71, -74, 1, -67, -77, 62, -72, -80, -19, -64, -66, -86, -81; /M: SY='G'; M= -58, -85, -73, -84, -92, 89, -80, -99, -78, -95, -85, -60, -78, -75, -85, 9, -73, -92, -85, -87; /M: SY='S'; M= -51, -74, -66, -67, -84, -59, -69, -84, -67, -88, -81, -54, -74, -58, -71, 98, -46, -76, -93, -76; /M: SY='C'; M= -72, 143, -92, -92, -82, -87, -92, -89, -88, -80, -80, -78,-103, -95, -94, -74, -72, -77,-112, -93; /M: SY='L'; M= -75, -79, -94, -86, -53, -95, -78, -15, -86, 71, 53, -91, -92, -79, -84, -86, -72, -3, -83, -63; /M: SY='P'; M= -40, -91, -72, -59, -89, -78, -68, -82, 15, -82, 22, -67, 64, 49, 45, 5, -54, -82, -86, -77; /M: SY='R'; M= -72, -88, -72, -61, -83, -82, -25, -52, 41, -79, 7, -64, -81, -53, 82, 4, -69, -29, -86, -72; /M: SY='F'; M= -86, -82, -97, -93, 110, -93, -75, -59, -88, -51, -61, -87, -96, -98, -85, -84, -77, -64, -50, 16; /M: SY='S'; M= -58, -76, -65, -69, -80, -65, 8, -80, -67, -83, -77, 18, -74, -63, -72, 75, 48, -74, 44, -72; /M: SY='T'; M= -63, -74, -70, -72, -75, -78, -78, -22, -69, -27, -14, -61, 6, -72, -77, -6, 93, -60, -95, -75; /M: SY='M'; M= -22, -79, -91, -82, -60, -85, 10, -33, -77, 15, 122, -80, -82, -69, -75, -79, -70, -53, -85, -61; /M: SY='P'; M= -75,-100, -76, -65, -95, -77, -79, -84, -73, -94, -81, -81, 115, -75, -85, -16, -67, -88, -90, -92; /M: SY='F'; M= -79, -82, -92, -89, 89, -91, -70, -31, -83, -52, 41, -83, -91, -87, -82, -79, -11, -8, -55, 52; /M: SY='M'; M= 12, -77, -87, -81, -60, -84, -77, -12, -80, 51, 61, -81, -85, -75, -81, -36, 13, -19, -85, -67; /I: I=-24; MD=-61; /M: SY='F'; M= -48, -7, -85, -82, 70, -88, -68, -64, -77, -30, -64, -14, -93, 5, -20, -34, -37, -14, -59, 64; D=-24; /I: I=-24; MD=-61; /M: SY='C'; M= -74, 141, -93, -94, -84, -89, -93, -91, -89, -81, -82, -80,-104, -97, -96, -76, -74, -78,-114, -95; D=-24; /I: I=-24; MI=0; MD=-61; IM=0; DM=-61; /M: SY='N'; M= -72, -82, 34, 11, -90, -18, -58, -89, -19, -93, -82, 92, -1, -60, -67, -58, -40, -89,-102, -82; /M: SY='I'; M= -53, -86, -87, -80, -17, -91, -82, 67, -75, 0, 9, -80, 11, 1, 3, -24, -49, -5, -83, -67; /I: I=-30; MD=-77; /M: SY='N'; M= -74, -83, 12, -67, 7, -6, 20, -83, -65, -84, 4, 88, -2, -23, -72, -61, -33, -85, -95, -72; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='N'; M= -68, -82, 29, 3, -88, 8, -61, -84, -61, -85, 14, 74, -78, 25, -68, -1, -4, -83, -97, -79; /M: SY='V'; M= -20, -77, -81, -77, -70, -86, -85, -14, 7, -58, -58, -13, -83, -76, -18, -68, 15, 73, -95, -73; /M: SY='C'; M= -22, 141, -90, -90, -82, -85, -90, -88, -86, -79, -79, -77,-100, -93, -92, -72, -71, -75,-109, -92; /M: SY='N'; M= -74, -85, -22, -18, -80, -70, 74, -85, -60, -85, -73, 82, -2, 27, -33, -47, -65, -49, -95, 3; /M: SY='Y'; M= -78, -86, -86, -86, 65, -88, -62, 2, -81, -46, -59, -82, -92, -80, -79, -13, -72, -9, -49, 92; /M: SY='A'; M= 78, -72, -73, -70, -83, -61, -75, -74, -71, -29, -70, 14, -77, -68, -76, 7, -60, -64, -87, -80; /M: SY='S'; M= -59, -79, -68, -11, -81, -68, -66, -77, -60, -75, 54, -60, -75, 23, 19, 75, -25, -74, -89, -73; /M: SY='R'; M= -77, -92, -71, -62, -86, -85, -62, -92, -36, -86, -75, 8, -85, -52, 102, -70, -36, -86, -88, -74; /M: SY='N'; M= -73, -80, -48, -64, -85, -64, 45, -87, -18, -91, -77, 105, -82, 5, -63, -56, -60, -89,-102, -43; /M: SY='D'; M= -75, -91, 99, 18, -97, -1, -65, -97, -64, -94, -92, -48, -76, -62, -73, -65, -69, -92,-107, -82; /M: SY='Y'; M= -78, -91, 11, -19, -53, -85, -56, -79, 31, -75, -69, -68, -84, -59, 49, -72, -73, -80, -59, 89; /M: SY='S'; M= -50, -72, -63, -64, -82, -59, -67, -81, -63, -84, -78, -34, -72, -57, -23, 96, 0, -73, -90, -74; /M: SY='Y'; M= -81, -88, -84, -85, 43, -89, -53, -32, -78, -2, -56, -83, -93, -75, -75, -78, -75, -65, -42, 110; /M: SY='W'; M= -84,-108,-112, -89, -50, -83,-110, -80, -82, -34, -80,-105, -89, -81, -85, -92, -96, -94, 167, -37; /M: SY='L'; M= -76, -79, -16, -82, -51, -94, -77, -42, -86, 81, -39, -89, -93, -79, -84, -85, -72, -50, -81, -63; /M: SY='S'; M= 21, -73, -11, -65, -84, -36, -70, -81, -67, -84, -77, -56, -73, -61, -72, 83, 13, -72, -91, -77; /M: SY='T'; M= -60, -71, -66, -69, -77, -75, -76, -69, -66, -74, -70, -55, -69, -69, -74, 19, 101, -61, -97, -75; /M: SY='P'; M= 15, -81, 11, -67, -79, -45, -73, -68, -71, 3, -67, 21, 63, -71, -78, -17, 22, -19, -91, -79; /M: SY='E'; M= 49, -80, -60, 52, -84, -58, -70, -21, -17, -76, -71, -2, -73, -4, -8, -59, -24, -15, -88, -78; /M: SY='P'; M= -25, -93, -13, -62, -86, -77, -74, -76, -37, -9, -54, -75, 98, 31, -76, -69, -18, -79, -87, -83; /M: SY='M'; M= -73, -84, -10, -76, -62, -88, 12, 35, -68, -2, 92, -75, -31, -68, 26, -77, -70, -13, -82, -2; /M: SY='P'; M= -71, -92, -75, -66, -85, -76, -75, -76, -37, -21, 5, -31, 101, -71, -16, 7, -24, -79, -88, -84; /I: I=-24; MD=-61; /M: SY='M'; M= -90,-103, -86, 15, -94, -99, -83, -80, -83, -77, 80, 5, 10, 11, -87, -89, -87, -39,-107, -90; D=-24; /I: I=-24; MI=0; MD=-61; IM=0; DM=-61; /M: SY='M'; M= -78, -87, -98, -89, -70, -92, -73, -55, -84, -6, 118, -86, -89, -29, -82, -19, -76, -62, -92, -69; D=-24; /I: I=-24; DM=-61; /M: SY='M'; M= 36, -78, -72, 0, -75, -73, -68, -21, -4, -60, 88, -18, -75, 21, -66, -20, 1, -61, -85, -70; /M: SY='P'; M= -28, -99, -76, -65, -94, -76, -79, -81, -72, -90, -19, -82, 116, -75, -84, -72, -68, -85, -88, -91; /M: SY='I'; M= -29, -80, -92, -87, -59, -92, -87, 61, -85, 26, 17, -86, -86, -81, -86, -42, -65, 44, -86, -67; /M: SY='P'; M= -23, -82, -66, -7, -81, -48, -68, -79, 13, -80, 3, -32, 40, 37, -6, 36, 31, -76, -48, -76; /M: SY='G'; M= -19, -84, -5, 34, -86, 55, -73, -24, -68, -80, -75, 4, -30, -1, -75, -17, -68, 0, -88, -81; /M: SY='R'; M= -35, -84, -12, 33, -84, -47, 3, -53, -23, -82, -74, 9, -74, 35, 44, 9, 24, -78, -89, -37; /M: SY='E'; M= 25, -83, 30, 42, -81, -43, -64, -45, -61, -30, -72, 22, -75, 40, -66, -16, -65, -75, -86, -1; /M: SY='I'; M= -71, -82, -88, -84, -59, -92, -85, 68, -17, 30, -7, -81, -84, -78, -81, -22, -5, 6, -84, -66; /M: SY='E'; M= -1, -89, 0, 56, -91, -80, -67, -88, 14, -83, 5, -66, -5, 23, 29, -32, -70, -83, -90, -79; /M: SY='P'; M= -75, -97, 17, -3, -95, -28, -74, -89, 7, -93, -82, -29, 89, 21, -71, -59, -71, -90, 6, -85; /M: SY='Y'; M= -82, -93, -80, -78, 16, -88, 34, -72, -69, -67, -63, -77, -92, 7, 9, -76, -77, -76, -48, 107; /M: SY='I'; M= -77, -89, -98, -96, -7,-102, -97, 94, -91, -44, -48, -88, -86, -88, -94, -85, -70, -21, -83, -65; /M: SY='S'; M= -13, -76, -69, -69, -84, -47, -71, -82, -69, -84, 8, -34, -76, -61, -73, 91, -43, -75, -93, -77; /M: SY='R'; M= -78, -95, -75, -62, -88, -88, -64, -94, -5, -87, -76, -67, -86, -51, 103, -72, -77, -88, -87, -74; /M: SY='C'; M= -70, 142, -90, -90, -80, -86, -90, -82, -86, -76, -77, -77,-101, -94, -92, -73, -70, -25,-110, -90; /M: SY='T'; M= 21, -73, -75, -74, -74, -72, -80, -1, -73, -65, -64, -66, -76, -71, -78, 41, 50, 38, -92, -74; /M: SY='V'; M= -62, -76, -88, -21, -64, -93, -92, -30, -82, -50, -21, -86, -87, -83, -84, -75, -60, 91, -97, -71; /M: SY='C'; M= -71, 142, -90, -91, -79, -87, -90, -24, -86, -76, -76, -77,-100, -93, -93, -74, -70, -71,-109, -90; /M: SY='E'; M= -69, -90, -42, 99, -93, -85, -63, -93, -12, -86, -81, -65, -65, 1, -58, -66, -70, -86, -89, -82; /M: SY='A'; M= 61, -73, -75, -73, -82, 19, -79, -68, -73, -75, -70, -67, -76, -70, -78, 20, 9, 10, -88, -79; /M: SY='P'; M= -73, -94, -72, -64, -90, -77, 17, -46, -18, -88, -76, -12, 102, -70, -19, -29, 5, -82, -90, -83; /M: SY='T'; M= 49, -72, -70, -69, -82, -17, -75, -75, -69, -78, -73, -61, -49, -67, -75, 45, 58, -65, -90, -78; /M: SY='H'; M= -72, -87, -71, -67, -75, -80, 55, 32, -63, -66, 19, 26, 23, 44, 9, -19, -67, -8, 33, -66; /M: SY='V'; M= 37, -75, -84, -79, -66, -78, -83, 10, -78, -28, -57, -78, -45, -77, -81, -11, -19, 60, -86, 0; /M: SY='I'; M= -75, -85, -97, -93, 20, -98, -90, 75, -88, -9, 35, -88, -87, -86, -90, -84, -70, 20, -81, -62; /M: SY='A'; M= 83, -75, -81, -74, -86, -64, -82, -76, -76, -34, -72, -76, -80, -73, -81, -55, -41, -64, -89, -83; /M: SY='V'; M= -72, -83, -99, -94, 19,-100, -96, 11, -91, -8, -23, -94, -95, -93, -92, -84, -70, 71, -91, -68; /M: SY='H'; M= -82, -93, -65, -66, -80, -83, 136, -98, -70, -81, -66, -55, -82, -59, -64, -71, -80, -98,-116, -49; /M: SY='S'; M= -53, -76, -68, -69, -86, -61, -71, -86, -69, -90, -83, -56, -76, -61, -73, 96, -48, -78, -95, -78; /M: SY='Q'; M= -71, -97, -66, -46,-102, -79, -59, -88, -52, -83, -70, -62, -79, 119, -52, -61, -74, -90, -84, -73; /M: SY='T'; M= -65, -80, 50, -64, -86, -12, -75, -78, -70, -83, -79, -56, -76, -70, -77, 35, 66, -27,-101, -80; /M: SY='T'; M= -71, -83, -77, 1, -71, -88, -77, 31, -69, 4, 36, -73, -81, 0, 9, -12, 41, -23, -90, -72; /M: SY='T'; M= -20, -82, 23, -9, -83, -74, 31, -69, -66, -34, -74, 12, -77, 26, -71, 34, 37, -77, -96, -33; /M: SY='I'; M= -76, -87, -15, -89, -61, -99, -92, 78, -89, 14, -48, -86, -88, -86, -91, -84, -70, 17, -88, -69; /M: SY='P'; M= -77,-102, -78, -66, -97, -80, -80, -85, -73, -94, -81, -82, 111, 6, -84, -73, -17, -89, -91, -93; /M: SY='P'; M= -46, -92, 22, 18, -93, -78, 25, -85, -35, -88, -79, 1, 63, 36, -71, -19, -2, -45, -96, -81; /M: SY='C'; M= -73, 141, -93, -93, -84, -89, -93, -90, -89, -81, -81, -79,-104, -97, -96, -76, -73, -78,-113, -94; /M: SY='P'; M= -79,-103, -80, -68, -19, -81, -82, -85, -76, -93, -82, -86, 114, -79, -88, -76, -72, -90, -89, -90; /M: SY='N'; M= -4, -85, -13, -45, -87, 16, 27, -81, -67, -36, -75, 32, 6, 26, -16, 19, -65, -24, -94, -78; /M: SY='G'; M= -45, -86, -65, -82, -92, 79, -80, -95, -37, -94, -84, -15, -79, -76, -50, -33, 18, -89, -88, -87; /M: SY='W'; M= -88,-113,-116, -92, -53, -86,-116, -86, -84, -83, -86,-109, -91, -84, -88, -95,-100,-101, 167, -39; /M: SY='R'; M= -61, -86, 24, 25, -82, -56, -23, 12, -60, -51, -72, -18, -79, -62, 35, 16, 13, -21, -95, -77; /M: SY='S'; M= -60, -82, -61, 37, -89, 12, -71, -88, -66, -89, -83, -4, -22, -60, -73, 66, -8, -56, -94, -82; /M: SY='L'; M= -79, -81, -97, -88, -53, -97, -79, -44, -89, 76, 34, -95, -95, -82, -86, -89, -75, -52, -83, -65; /M: SY='W'; M= -88,-113,-115, -92, -52, -86,-113, -85, -84, -83, -86,-108, -92, -84, -88, -94,-100,-100, 166, -16; /M: SY='I'; M= -70, -83, -79, -42, -72, -87, -84, 63, 16, -61, -61, -70, -78, -42, -74, -5, 53, -48, -90, -74; /M: SY='G'; M= -61, -89, -77, -88, -95, 91, -83,-103, -82, -98, -87, -62, -80, -79, -89, -61, -80, -96, -86, -90; /M: SY='Y'; M= -82, -89, -88, -88, 55, -92, -59, -54, -82, -60, -61, -86, -96, -80, -79, -80, -76, 3, -46, 103; /M: SY='S'; M= -53, -76, -68, -69, -86, -61, -71, -86, -69, -90, -83, -56, -76, -61, -73, 96, -48, -78, -95, -78; /M: SY='F'; M= -86, -84, -98, -94, 101, -95, -76, -59, -90, -3, -60, -89, -98, -96, -87, -86, -79, -65, -54, 30; /M: SY='L'; M= -47, -82, -95, -89, -25, -96, -82, 30, -87, 49, 38, -90, -91, -83, -86, -84, -41, 17, -82, -2; /M: SY='M'; M= -74, -82, -94, -83, -63, -88, -67, -48, -78, 1, 127, -82, -84, -6, -76, -82, -72, -55, -86, -63; /M: SY='H'; M= -83, -95, -72, -71, 2, -87, 117, -92, -74, -80, -70, -63, -87, 8, -70, -41, -20, -92, -94, 21; /M: SY='T'; M= -68, -77, -72, -76, -83, -83, -83, -75, -73, -79, -76, -26, -75, -77, -81, -51, 98, -67,-104, -81; /M: SY='S'; M= 35, -82, -78, -79, -90, 32, -81, -86, -78, -56, -21, -68, -82, -73, -83, 47, -13, -78, -94, -85; /I: I=-28; MD=-71; /M: SY='A'; M= 60, -84, 9, -77, -92, -27, -88, -74, -82, -82, -79, -78, -45, -80, -87, -33, -71, 13, -99, -89; D=-28; /I: I=-28; MI=-71; MD=-71; IM=-71; DM=-71; /M: SY='G'; M= -70, -95, -78, -89,-101, 77, -84,-107, -84,-104, -92, 16, -88, -9, -91, -67, -84,-102, -94, -95; D=-28; /I: I=-28; DM=-71; /M: SY='A'; M= 38, -86, 20, -73, -94, 2, 36, -89, -78, -90, -83, -10, -85, -74, -69, 13, -18, -48,-102, -83; /M: SY='E'; M= -74, -97, -41, 63,-100, 27, 21,-102, -67, -95, -88, -70, -79, 26, -74, -15, -79, -96, -97, -86; /M: SY='G'; M= -54, -94, -82, -94,-101, 85, -89,-108, -88,-104, -93, -68, -86, -85, -95, -67, -86,-102, -92, -96; /M: SY='G'; M= -27, -88, -81, -86, -13, 54, -86, -49, -83, -89, -84, -69, -85, -81, -89, 23, 27, -48, -93, -84; /M: SY='G'; M= -67, -95, -82, -94,-101, 85, -89,-109, -88,-104, -93, -68, -86, -85, -95, -54, -86,-102, -92, -96; /M: SY='Q'; M= -77,-102, -73, -52,-106, -85, -65, -92, -58, -87, -13, -68, -85, 112, -58, -67, -80, -94, -90, -78; /M: SY='S'; M= 33, -85, -32, -74, -92, -16, -78, -87, -76, -46, -31, 12, -34, 6, -80, 46, -65, -80, -98, -86; /M: SY='L'; M= -85, -87,-102, -94, -59,-104, -86, -50, -96, 73, -46,-102, -61, -89, -93, -95, -81, -58, -89, -71; /M: SY='S'; M= 20, -85, -79, -3, -87, -21, -82, -66, -77, -78, 24, -74, -84, -4, -81, 36, -11, 11, -98, -84; /M: SY='S'; M= -46, -83, -74, -76, -93, -7, -78, -93, -76, -96, -89, -63, -82, -68, -80, 86, -56, -85, -99, -85; /M: SY='P'; M= -80,-105, -84, -74,-101, -84, -87, -89, -80, -99, -87, -87, 103, -82, -92, -5, -33, -58, -98, -98; /M: SY='G'; M= -67, -95, -82, -94,-101, 85, -89,-109, -88,-104, -93, -68, -86, -85, -95, -67, -86,-102, -92, -96; /M: SY='S'; M= -59, -82, -74, -75, -92, -67, -77, -92, -75, -95, -89, -62, -82, -66, -79, 91, -53, -84,-100, -84; /M: SY='C'; M= -79, 136, -99, -99, -89, -95, -99, -96, -95, -87, -87, -85,-110,-103,-101, -82, -79, -84,-119,-100; /M: SY='L'; M= -85, -87,-102, -94, -59,-103, -85, -50, -95, 71, 23,-101,-101, -88, -92, -95, -81, -58, -89, -71; /M: SY='E'; M= -81,-102, -53, 87,-105, -96, -74,-105, -62, -97, -92, -77, -77, 13, -71, -77, -82, -98,-100, -93; /M: SY='D'; M= -86,-102, 67, 47,-104, -89, 42,-106, -53,-100, -94, -32, -84, -25, -77, -77, -80,-102,-113, -86; /M: SY='F'; M= -97, -92,-109,-104, 101,-104, -88, -70,-100, -61, -72, -98,-107,-110, -97, -95, -88, -75, -61, -24; /M: SY='R'; M= -88,-104, -84, -72, -97, -98, -73,-104, -44, -96, -85, -77, -96, -61, 96, -82, -87, -97, -97, -83; /M: SY='A'; M= 57, -85, -85, -81, -87, -73, -84, -85, -45, -88, -83, -78, -88, -77, -84, 32, -51, -45, -92, 7; /M: SY='T'; M= 7, -87, -79, -78, -91, -82, -36, -20, -77, -84, -80, 2, -85, 23, -82, 14, 51, -35,-103, -86; /M: SY='P'; M= -87,-113, -88, -76,-107, -89, -91, -95, -84,-105, -91, -94, 107, -87, -96, -84, -80,-100,-100,-104; /M: SY='F'; M= -90, -91,-107,-103, 90,-104, -90, -62, -98, -61, -70, -98,-105,-107, -96, -93, -84, 18, -67, -13; /M: SY='I'; M= -86, -97,-107,-104, -69,-111,-105, 80,-100, -6, -55, -98, -96, -96,-102, -95, -80, -19, -95, -77; /M: SY='E'; M= -80,-102, -53, 89,-104, -34, -75,-106, -63, -98, -94, -77, -77, -56, -73, -77, -82, -98,-101, -95; /M: SY='C'; M= -82, 133,-102,-102, -92, -98,-102, -99, -98, -90, -90, -88,-113,-106,-104, -85, -82, -87,-122,-103; /M: SY='H'; M= -84, -96, -67, -74, -95, -30, 93,-102, -73, -96, -82, 61, -91, 18, -74, -30, -78,-102,-115, -73; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='G'; M= -3, -95, -81, -47,-102, 65, -87,-105, -81,-103, -93, 1, -29, -82, -12, -70, -84, -98, -97, -96; /M: SY='R'; M= -85,-101, -48, -70, -96, -55, 26, -93, 18, -92, -82, -74, -93, 17, 69, -80, -83, -21, -99, -81; /M: SY='G'; M= -70, -98, -85, -97,-104, 82, -92,-112, -90,-107, -96, -71, -89, -88, -71, -70, -89,-105, -95, -99; /M: SY='T'; M= -77, -88, -79, -78, -89, -90, 36, -83, -48, -83, 18, -35, -84, -8, -5, -41, 73, -78,-107, -80; /M: SY='C'; M= -82, 133,-102,-102, -92, -98,-102, -99, -98, -90, -90, -88,-113,-106,-104, -85, -82, -87,-122,-103; /M: SY='H'; M= -84, -95, -67, -76, -91, -80, 97,-101, -75, -96, -82, 66, -92, -70, -76, -9, -76,-102, 7, -70; /M: SY='Y'; M= -93,-101, -93, -95, 36, -99, 6, -77, -88, -72, -71, -92,-104, -85, -85, -88, -87, -82, -52, 102; /M: SY='Y'; M= -93,-101, -21, -93, 45, -99, -67, -78, -89, -73, -74, -92,-104, -88, -87, -89, -88, -83, 51, 94; /M: SY='A'; M= 40, -89, 10, 14, -99, -25, -83, -94, -78, -95, -89, -73, -34, -73, -84, 29, -51, -84,-101, -92; /M: SY='N'; M= -32, -89, 8, -76, -95, -43, -75, -88, -75, -95, -87, 69, -10, -76, -83, -24, 31, -32,-112, -91; /M: SY='S'; M= -10, -91, -78, -13, -91, -83, -80, -21, 17, -39, -8, -20, -86, 21, -72, 31, -13, -46, -99, -85; /M: SY='Y'; M= -34, -95, -87, -87, -8, -34, 8, -80, -14, -36, -74, -82, -95, -81, -81, -77, 24, -80, -67, 81; /M: SY='S'; M= -63, -85, -78, -80, -93, -34, -82, -87, -79, -94, -89, -67, -86, -72, -84, 81, -37, -19,-104, -87; /M: SY='F'; M= -96, -94,-106,-103, 94,-103, -82, -71, -97, -63, -71, -97,-107,-105, -94, -94, -88, -76, -59, 40; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='W'; M= -96,-120,-121,-101, -59, -95,-114, -93, -92, -90, -92,-115,-100, -92, -95,-102,-107,-106, 154, 14; /M: SY='L'; M= -87, -90,-105, -97, -62,-106, -87, -53, -97, 66, 40,-103,-103, -90, -94, -97, -84, -61, -92, -74; /M: SY='T'; M= 31, -85, -86, -83, -87, -84, -89, -25, -79, -80, -77, -78, -87, -81, -8, -14, 49, 2,-100, -38; /M: SY='T'; M= -19, -85, -83, -84, -86, -85, -89, -1, -82, -78, -77, -40, -86, -81, -88, 34, 53, 9,-105, -85; /M: SY='I'; M= -83, -92, -39, -97, -68,-107, -97, 41, -97, 35, -56, -98,-100, -94, -98, -93, -79, 27, -97, -78; /M: SY='E'; M= -83, -99, 46, 50,-102, -49, -73,-100, -51, -98, -15, 30, -17, -66, -29, -75, -48, -97,-108, -92; /M: SY='P'; M= -27,-100, 31, 33,-101, -59, -18, -91, -46, -95, -60, -50, 45, -20, -40, -35, -78, -22,-105, -92; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='H'; M= -80, -95, -20, -8, -89, -39, 54, -16, -66, -13, -76, 8, -89, 29, -42, 13, -32, -83,-103, -79; /M: SY='Q'; M= -57, -97, 21, 2, -67, -85, -72, -97, -18, -96, -87, 26, -87, 59, 3, -29, -8, -95,-102, -86; /M: SY='Q'; M= -83, -99, -34, -26, 20, -93, -75, -77, -74, -71, 71, -80, -1, 73, -75, -80, -82, -66, -89, -71; /M: SY='F'; M= -76, -93,-102, -97, 90, -77, -88, -73, -92, -67, -75, -92,-102, -24, -55, -8, -84, -55, 33, -46; /I: I=-30; MD=-77; /M: SY='Q'; M= -54, -99, -75, 17,-103, -49, -78, -98, -28, -97, -88, -6, -90, 47, 21, 10, -21, -53,-103, -90; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='K'; M= -28, -97, -19, -45, -94, -53, -81, -28, 40, -72, 17, -76, -90, 11, 15, -16, -62, -23, -98, -85; /M: SY='P'; M= -88,-112, -88, -78,-107, -90, -92, -95, -85,-105, -92, -93, 103, -88, -97, -84, -21, -99,-102,-104; /M: SY='E'; M= -62, -97, -77, 25, -91, -93, -10, -10, -18, -70, 5, -34, -89, 19, 10, -7, -25, -4,-101, -85; /M: SY='Q'; M= -43,-101, -83, -72, -41, -6, -52, -97, -45, -98, -87, -77, 51, 57, -20, 14, -78, -96, -97, -89; /M: SY='Q'; M= -69,-101, 7, 20, -5, -32, -76, -96, -70, -61, -85, -73, -28, 67, -42, 0, -80, -95, -96, -82; /M: SY='T'; M= -74, -84, -82, -85, -87, -92, -92, -40, -81, -81, -79, -72, -83, -86, -89, -61, 87, -4,-110, -87; /M: SY='L'; M= -53, -92,-105, -98, -64,-105, -89, -2, -97, 52, 22,-101,-102, -91, -96, -94, -55, -15, -91, -5; /M: SY='K'; M= -84, -99, -77, -34,-101, -92, -81,-100, 82,-100, -88, -71, -12, -63, -49, -78, -35, -96, -95, -89; /M: SY='A'; M= 56, -87, -82, -1, -97, -54, -87, -87, -42, -90, -84, -80, -87, -29, -39, 2, -57, -30, -99, -92; /M: SY='G'; M= -20, -96, 15, -38,-103, 57, -87,-105, -46,-104, -96, -29, -89, -81, -90, 2, -81, -81,-101, -96; /M: SY='Q'; M= -84,-100, 2, 31, -41, -40, -45, -97, -70, -44, -87, 32, -36, 47, -33, -32, -80, -97,-103, -88; /I: I=-21; MD=-53; /M: SY='L'; M= -26, -94,-100, -95, -44, -22, -93, -2, -93, 41, -63, -94,-100, -27, -54, -86, 5, -67, -97, -82; D=-21; /I: I=-21; MI=0; MD=-53; IM=0; DM=-53; /M: SY='R'; M= -95,-108, -88, 13, -93,-108, -22, -90, -14, 12, -80, -91,-101, -15, 41, -93, -93, -92,-105, -90; D=-21; /I: I=-21; DM=-53; /M: SY='S'; M= -46, -93, -5, -29,-101, -83, -81, -97, 7, -99, -92, 9, -88, -1, -61, 41, 19, -91,-107, -91; D=-21; /I: I=-21; DM=-53; /M: SY='R'; M= -89,-104, -85, -79, -96, -97, 19, -8, 15, -92, -84, 2, -97, -70, 61, -41, -85, -56,-104, -86; D=-21; /I: I=-21; DM=-53; /M: SY='V'; M= -82, -95,-108,-103, -76,-111,-108, 46,-100, -23, -63,-101,-101,-100,-103, -93, -35, 51,-105, -84; /M: SY='S'; M= -66, -89, -81, -82, -99, -75, -84, -72, -82,-101, -95, -69, -89, -74, -86, 83, -61, -90,-107, -91; /M: SY='R'; M= -92,-108, -88, -75,-101,-101, -78,-107, -5,-100, -89, -81, -99, -65, 88, -86, -90,-101,-100, -88; /M: SY='C'; M= -87, 127,-107,-107, -98,-103,-107,-104,-103, -95, -95, -93,-118,-111,-110, -90, -87, -92,-127,-108; /M: SY='Q'; M= -24,-104, -85, -69,-106, -94, -80, -47, -67, -94, -85, -79, -94, 80, 20, -38, -7, -68,-101, -89; /M: SY='V'; M= -79, -93,-110,-104, -80,-111,-112, -23,-101, -66, -69,-105,-105,-104,-103, -93, -77, 75,-114, -88; /M: SY='C'; M= -66, 126,-107,-107, -98,-103,-107,-105,-103, -95, -95, -94,-118,-111,-110, -90, -88, -92,-127,-108; /M: SY='M'; M= -89,-100,-100, -27, -83,-105, -86, 4, -84, -29, 87, -95, -98, -20, 6, -94, -56, -30,-102, -82; /M: SY='K'; M= -92,-107, -87, -74,-100,-100, -85,-104, 61,-100, -15, -80, -95, -69, 42, -87, -88,-101, 32, -87; /M: SY='H'; M= -75,-102, -84, -86, -93, -95, 37, -8, -20, -90, -62, 33,-100, -30, 21, -25, -64, -14,-108, -24; /M: SY='P'; M= -50,-107, -37, -91,-106, -16, -96, -99, -53, -40, -95, -16, 12, -15, -13, -4, -8, -47,-114,-102; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 20 in 20 different sequences |
| Number of true positive hits | 20 in 20 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | Collagen IV NC1 |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
20 sequences
CO4A1_BOVIN (Q7SIB2), CO4A1_CAEEL (P17139), CO4A1_DROME (P08120), CO4A1_HUMAN (P02462), CO4A1_MOUSE (P02463), CO4A2_ASCSU (P27393), CO4A2_BOVIN (Q7SIB3), CO4A2_CAEEL (P17140), CO4A2_HUMAN (P08572), CO4A2_MOUSE (P08122), CO4A3_BOVIN (Q28084), CO4A3_HUMAN (Q01955), CO4A3_MOUSE (Q9QZS0), CO4A4_BOVIN (Q29442), CO4A4_HUMAN (P53420), CO4A4_MOUSE (Q9QZR9), CO4A4_RABIT (P55787), CO4A5_CANLF (Q28247), CO4A5_HUMAN (P29400), CO4A6_HUMAN (Q14031)» more
|
| PDB [Detailed view] |
14 PDB
1LI1; 1M3D; 1T60; 1T61; 5NAX; 5NAY; 5NAZ; 5NB0; 5NB1; 5NB2; 6MPX; 6WKU; 8TXN; 8TYS » more |