Entry: PS51475

General information about the entry
Entry name PROTEASOME_A_2
Accession number PS51475
Entry type MATRIX
Date JAN-2010 (CREATED); JAN-2010 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00326
Associated ProRule PRU00808
Name and characterization of the entry
DescriptionProteasome A-type subunit profile.
Matrix / Profile
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=183;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=178;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.9153111; R2=0.0073357; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=898; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=625; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-24; D=-80; I=-80; I0=-24; B1=-300; E1=-300; MI=-255; MD=-255; IM=-255; DM=-255;

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-255; BD=-255;
/M:
/M: SY='S'; M=  -2, -48, -46, -46, -54,  37, -51,   0, -44, -11, -39, -19, -53, -14, -51,  55,  39, -20,  43, -50;
/M: SY='T'; M=  28,   0, -46, -44, -61, -48, -52, -40, -41, -31, -38, -13,   6, -42, -48,  -1,  89, -13, -68, -53;
/M: SY='A'; M=  59,  40, -50, -44, -59, -38, -53, -40, -42, -37,  -6, -40, -48, -41, -50,  45,  39,   1, -68, -53;
/M: SY='V'; M= -40, -46, -77, -70, -35, -78, -75,  55, -64,  30,   1, -74, -68, -63, -66, -59, -36,  66, -65, -46;
/M: SY='G'; M=  25, -59, -49, -57, -74,  94, -56, -74, -50, -76, -61, -37, -58, -55, -62, -29, -49, -64, -70, -68;
/M: SY='I'; M= -33, -47, -75, -70, -33, -78, -74,  68, -65,  29,  -4, -74, -69, -64, -67, -59, -38,  54, -64, -46;
/M: SY='K'; M= -32, -33, -46, -26, -64, -58, -37, -46,  72, -14, -24, -37, -51,  10,  71, -32, -25, -31, -67, -53;
/M: SY='C'; M=  30,  70, -49, -50, -27,  44, -54, -53, -47, -56, -48, -11, -53, -47, -54,  31,  42, -30, -15, -53;
/M: SY='K'; M=   6, -63, -34,  10, -71, -23, -23, -65,  78, -64, -51,  23,   3, -18,   3,  13,   0, -57, -71, -56;
/M: SY='D'; M= -35, -70,  85,  41, -75, -44, -36, -69, -32, -74, -63,  49, -50, -11, -44,  -9,  10, -67, -78, -66;
/M: SY='G'; M=  10,  60, -52, -56, -11,  76,  41, -40, -52, -63, -54, -35, -60, -51, -59,  -4, -31, -49, -59, -11;
/M: SY='V'; M=  26, -41, -70, -62, -44, -62, -72,  37, -58, -20, -21, -66, -61, -58, -62, -43, -14,  76, -69, -48;
/M: SY='V'; M= -28,  31, -77, -68, -41, -74, -77,  20, -63,   7, -18, -72, -65, -62, -65, -53, -32,  84, -67, -47;
/M: SY='L'; M= -47, -50, -79, -71,   4, -81, -70,  35, -65,  68,   5, -76, -71, -61, -63, -63, -44,  26, -54, -40;
/M: SY='A'; M=  60,  -9, -59, -54, -21,  33, -60,  14, -50, -22, -34, -53, -55, -51, -58, -28, -13,  31, -66, -50;
/M: SY='V'; M=  44,   3, -57, -51, -53, -17, -60, -17, -48, -27, -31, -48, -53, -48, -54,  17,  38,  55, -69, -51;
/M: SY='E'; M= -36, -74,  38,  84, -64, -60, -24, -55, -23,   1, -43, -32, -49,  48, -34, -35, -43, -41, -65, -57;
/M: SY='K'; M= -43,  -4, -39, -21, -73, -53,   1, -68,  95, -65, -51,   2, -46, -13,  30, -34, -40, -63, -71, -55;
/M: SY='R'; M= -44, -71, -48, -29, -61, -59, -24, -40,  67,  -3, -41, -37, -53, -10,  76,  -8, -41, -38, -67, -53;
/M: SY='V'; M=   8, -46, -51, -49, -32, -54, -34,  33, -15, -10, -28,  13, -13, -26, -50,  34,  -1,  48, -67, -48;
/I:         I=-25; MI=0; MD=-81; IM=0; DM=-81;
/M: SY='T'; M=   4, -49, -49, -42, -58, -37, -32,  -6, -20, -25, -37, -32,  54,  13,   3,   6,  60,  17, -67, -53;
/M: SY='S'; M=   2, -49,  40,  -7, -66, -19,   0, -64, -34, -57, -53,  -1,  -4,  -7, -43,  81, -10, -55, -73, -55;
/M: SY='K'; M= -29, -69, -10,  29, -72, -42, -41, -35,  74, -62, -51, -26,  46,  11,   9,  -7, -10, -47, -71, -58;
/M: SY='L'; M= -49, -51, -77, -69, -14, -80, -66,  -8, -63,  80,  37, -39, -71, -57, -60, -63, -46, -18, -52, -43;
/M: SY='M'; M= -10, -51, -60, -46, -24, -44, -46,  18, -45,  38,  58, -54, -61,  42, -48,  13, -28,   7, -49,  24;
/M: SY='D'; M= -25, -20,  68,  57, -66, -52, -41, -35, -16, -33, -31,  -3, -50,  -3, -17,  16, -17,  -3, -73, -60;
/M: SY='P'; M=   1, -59,  10,  22, -54, -32,  32, -36, -27, -58, -50, -17,  70,  16, -24,  21,   4, -11, -59,  17;
/I:         I=-21; MD=-68;
/M: SY='Q'; M= -19, -60,  29,  19, -68,  -4,  -9, -61,  -9, -55, -48,   9, -50,  50,  33,  43,  16, -36, -67, -55; D=-21;
/I:         I=-21; MI=0; MD=-68; IM=0; DM=-68;
/M: SY='S'; M=  -5, -49, -31, -43, -38, -39, -52, -57, -27, -61, -10, -21,  -6, -41, -49,  71,  50, -36, -75, -57; D=-21;
/I:         I=-21; MI=0; MD=-68; IM=0; DM=-68;
/M: SY='V'; M= -22, -54, -59, -64, -32, -48, -62,  39, -60, -10, -26,  29, -44, -59, -64,  -9, -10,  48, -71, -19; D=-21;
/I:         I=-21; DM=-68;
/M: SY='E'; M= -41, -69, -16,  66, -70, -40,   5, -63,  25, -63, -52,  -9,  -3,  13,  46,   1,  17, -34, -69, -54;
/M:
/M: SY='I'; M= -36, -49, -74, -70, -32, -78, -24,  76, -64,  25,  27, -73, -70, -62, -66, -59, -39,  39, -63, -45;
/M: SY='F'; M= -33,  21, -60, -22,  71, -43,  51,  -7, -40, -19, -13, -50, -66,   4, -51,  -2, -46,  -9, -27,  64;
/M: SY='K'; M= -19,  -7, -37,  19, -58, -54,  21, -42,  51, -14,  26,  14,  21,  28,  11,   1, -14, -26,  -7, -38;
/M: SY='I'; M= -30, -10, -75, -71, -32, -77, -74,  73, -65,  32, -12, -74, -69, -65, -67, -59, -32,  43, -63, -46;
/M: SY='D'; M= -37, -67,  92,  -7, -68, -34,   5, -66, -37, -72, -62,  31, -50, -32, -48,   4,  28, -64, -74, -18;
/M: SY='D'; M= -32, -72,  73,  35, -71, -51, -16, -70,  21, -70, -59,  14,  -3,  11,  26, -11,  -8, -66, -16, -40;
/M: SY='H'; M= -39, -72,   0, -32, -47, -34, 125, -71, -28, -69, -52,  44, -58, -23, -24, -16, -22, -72, -54,  17;
/M: SY='I'; M= -16, -13, -71, -67, -36, -72, -71,  71, -62,   4,  32, -69, -67, -60, -65, -34, -15,  51, -65, -46;
/M: SY='G'; M=  22,  15, -52, -58, -59,  85, -57, -45, -52, -51, -33, -41, -59, -55, -62, -24, -46,  -5, -66, -33;
/M: SY='C'; M=  15,  92, -73, -66, -42, -62, -67,  18, -60,  21,  63, -65, -64, -55, -63, -44, -24,  28, -59, -50;
/M: SY='A'; M=  69,  32, -55, -47, -57, -24, -56, -32, -45, -29, -37, -47, -49, -44, -52,  28,   9,  26, -69, -52;
/M: SY='F'; M=  -4, -13, -65, -59,  43, -63, -51,  30, -55,  -7,  42, -56, -28, -52, -58,   5,  21,  32, -44,  34;
/M: SY='A'; M=  66, -39, -44, -39, -61, -32, -48, -31, -38, -53, -44, -13, -45, -37, -46,  59,  31, -36, -71, -53;
/I:         I=-21; MI=0; MD=-65; IM=0; DM=-65;
/M:
/M: SY='L'; M= -48, -53, -68, -61,  -5, -73,  17,  22, -54,  62,  59, -15, -23, -49, -11, -37, -44, -19, -54, -40;
/M: SY='T'; M=  13, -45, -55, -53, -46,   5, -57,  28, -33,  -8,   7, -21, -56, -48, -53,  -7,  56,  34, -64, -13;
/M: SY='A'; M=  75, -43, -51, -43, -66,  -5, -54, -55, -41, -57, -49, -47,  63, -42, -52,  20, -32, -41, -71, -58;
/M:
/M: SY='A'; M=  73, -23, -52, -47, -20,  44, -50, -54, -44, -55, -47, -44, -49, -44, -53,  13, -20, -41, -62,  -1;
/M: SY='R'; M= -50, -77, -44, -23, -30, -60, -30, -71,  22, -61, -51,  27, -59,  -3, 100, -38, -43, -64, -66, -50;
/M: SY='V'; M=   8, -47, -55, -46, -10, -58,  -3,  37, -34, -15,   3, -21, -57,  27, -49,  13,  18,  47, -62, -43;
/M: SY='L'; M= -30, -51, -73, -60, -27, -78, -63,  17, -57,  74,   8, -71, -68,  16, -56, -59, -45,   1, -54, -45;
/M: SY='V'; M=   3,  13, -66, -61, -42, -64, -69,  57, -31, -16, -21, -61, -62, -57, -60,   4, -11,  61, -68, -48;
/M: SY='N'; M= -30, -67,  62,  17, -69, -46, -19, -68,  11, -47, -55,  62, -51,  27,  20,  11, -22, -64, -71, -41;
/M: SY='R'; M= -42, -70, -51, -14,  30, -63,  35, -27,  30, -49, -44, -33, -60,  13,  69, -42, -17, -45, -38,  58;
/M: SY='A'; M=  81, -39, -57, -46, -53, -10, -54, -38, -44,   3,  25, -51, -49, -42, -52,   1, -32, -23, -67, -52;
/M: SY='R'; M= -49, -78, -50, -27, -64, -63, -29, -70,  21, -54, -48, -36, -58,  38, 102, -40, -44, -63, -62, -14;
/M: SY='V'; M= -15, -53,  -9, -14, -46, -16, -28,   9,   5,   0,   6,  20, -56,  20,  -5,  17,   3,  28, -13,  -2;
/M: SY='E'; M= -29, -71, -16,  90, -24, -59,  -6,  -9, -22, -44, -46, -36, -49,  40, -34,  -8, -29, -21, -14, -50;
/M: SY='C'; M=  74,  85, -41, -48, -63, -25, -56, -49, -46, -51, -45, -47, -49, -45, -54,  14,   3, -35, -66, -55;
/M: SY='Q'; M=  23, -57, -41, -11, -57, -51,  -7, -16, -15,  -5,  20, -19, -50,  93, -18,   7,  -8, -26, -57, -49;
/M: SY='N'; M= -35, -57, -10,  20, -60, -46, -32, -13,  -7, -55, -29,  61, -52,  35,  20,  45,  -1, -10, -66, -23;
/I:         I=-25; MI=0; MD=-81; IM=0; DM=-81;
/M: SY='Y'; M= -52, -64, -49, -10,  42, -60,  86, -54, -48, -50, -46,  21, -65, -36, -45,  -8, -48, -57,  72,  86;
/M: SY='R'; M= -31, -70, -45,   3, -36, -59, -14, -60,  43, -17, -44, -14, -55,   8,  81, -15, -16, -56,  29,  -4;
/M: SY='Y'; M= -47, -57, -38, -34,  51, -69,   5, -13,  -2,  38, -11, -38, -65, -13, -17, -10, -30,  -3,  11,  56;
/M: SY='T'; M= -36, -52,  -7, -36, -32, -53, -43,  -5,  18, -17,  20,  29, -53,  11,  11,  21,  50,  13, -65, -32;
/M: SY='Y'; M= -53, -59, -70, -60,  47, -70,   9, -39, -58, -22, -39, -11, -71, -51, -54, -53, -51, -15,   9, 116;
/M: SY='G'; M= -30, -69,  46,  31, -75,  63, -23, -75,   0, -76, -61,  30, -54,  15, -19, -26, -30, -70, -71, -65;
/M: SY='E'; M= -33, -69,  27,  76, -45, -56, -30, -63, -15, -60,  -8, -21, -50,  15,  11,  11,  -7, -58, -51,  47;
/M: SY='P'; M=  -2, -64,  19,  18, -67, -55, -48, -61, -10, -39, -27,  -8,  99,  -3, -28, -29, -13, -45, -68, -20;
/M: SY='M'; M= -18, -49, -69, -63, -34, -70, -61,  61, -57,   6,  83, -43,  -5, -36, -60, -52, -25,  32, -60, -21;
/M: SY='P'; M= -26, -59, -14, -34, -71,  -2, -51, -63, -38, -43, -57,   3, 100, -41, -13,  21,  26, -56, -72, -63;
/M: SY='V'; M= -31,  54, -73, -68, -42, -33, -75,  37, -63,   6, -19, -67, -65, -62, -66, -50,  -3,  71, -65, -48;
/M: SY='E'; M= -23, -70,  39,  77, -72, -34, -37, -53,  26, -58, -55, -28, -13,   4,  -8,  13,  -8, -49, -71, -59;
/M: SY='Y'; M= -20, -56, -32,  -9, -27, -59,   9,  -8, -19, -10,  11,   0, -57,  45,  26,  10,  -4,  25, -46,  48;
/M: SY='L'; M= -34,   5, -77, -70, -16, -79, -70,  33, -64,  72,  -5, -74, -70, -60, -62, -60, -23,   2, -55, -44;
/M: SY='T'; M=  47,  23, -55, -50, -54, -30, -58, -14, -47, -28, -12, -27, -52, -46, -53,   9,  49,  44, -68, -51;
/M: SY='K'; M= -41, -69,  11,   8, -68, -54,   7, -62,  63, -43, -46,  -9, -48,  50,  46,   3,   5, -43, -66, -53;
/M: SY='R'; M=   1, -61, -25,   0, -20, -54,   3, -33,  27, -21, -44,   0, -14,  -9,  55,  18, -27, -35,  27,  42;
/M: SY='I'; M= -42, -47, -75, -69, -32, -77, -71,  56, -63,  35,  37, -72, -68, -60, -64, -57, -17,  53,  18, -44;
/M: SY='C'; M=  66,  87, -54, -47, -65,   8, -55, -52, -45, -53, -45, -45, -50,   1, -53,  18,   1, -39, -64, -56;
/M: SY='D'; M= -25, -66,  82,   7, -53,  -7, -38, -65, -27, -51, -19,  39, -51,   8, -14,  20, -10, -64, -75, -63;
/M: SY='Y'; M= -45, -55, -60, -37,  -9, -69,  20,  24,  31,  34,  15, -28, -62, -12, -39, -48, -10,  18, -45,  46;
/M: SY='K'; M=  25, -52, -47, -35, -39, -49,  -4,   2,  51, -24,  50,   4, -51,  14, -27,  13, -15,   9, -64, -27;
/M: SY='Q'; M= -42, -71, -36,  -8, -63, -60,  47, -47, -15, -10, -30, -31, -50, 115, -19, -35, -41, -44, -50, -43;
/M: SY='Q'; M=  17, -55, -47,  14, -51, -12, -43,   5,   8, -11,  25, -27, -55,  38,  31, -35,   0,  20, -61, -15;
/M: SY='Y'; M= -35,  25, -61, -54,  46, -64,  49, -47, -51, -40, -43,  -2, -22, -46, -22, -11, -30, -49, -14, 104;
/I:         I=-17; MD=-53;
/M: SY='T'; M= -30, -42, -44, -44, -62,  11, -52, -26, -41, -49, -39, -30, -48, -42, -47,  -5, 101, -31, -67, -54; D=-17;
/I:         I=-17; MD=-53;
/M: SY='Q'; M= -42, -20, -24,  22, -64, -61, -20, -56, -16,   1, -30, -34, -50, 113, -21, -35, -42, -54, -52, -50; D=-17;
/I:         I=-17; MD=-53;
/M: SY='Y'; M= -39, -28, -45,  -9,  16, -20,  50, -44, -35, -54, -47,  14, -59,  -7,  23,  43, -29, -28, -37,  70; D=-17;
/I:         I=-17; MD=-53;
/M: SY='G'; M=  27, -57, -28, -41, -51,  70, -45, -66, -44, -68, -58,   9, -39, -49, -57,  12, -43, -48,  24,  31; D=-17;
/I:         I=-17; MD=-53;
/M: SY='G'; M=  -3, -61,   6,   6, -56,  80, -48, -41, -45, -70, -59, -35, -58, -45, -33,   3, -46, -62,  47,   9; D=-17;
/I:         I=-17; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='M'; M=  -1, -49, -58, -46, -47, -38, -52, -14,  14,   0,  56, -49, -58, -36,  37,  19, -22,  47, -66, -49;
/M: SY='R'; M= -50, -80, -53, -32, -69, -64, -30, -72,   2, -61, -51, -37, -45, -15, 110, -41, -45, -64, -67, -52;
/M: SY='P'; M= -44, -67, -50, -46, -77, -61, -60, -68, -43, -45, -65, -57, 125, -47, -60, -24, -45, -62, -73, -69;
/M: SY='F'; M= -58, -63, -79, -72, 100, -76, -39, -29, -69,  12,   3, -69, -77, -65, -64, -61, -57, -39, -16,  66;
/M: SY='G'; M= -27, -65, -48, -60, -76, 101, -56, -81, -52, -83, -66, -35, -61, -58, -64, -32, -53, -74, -70, -72;
/M: SY='V'; M=  -3,  59, -71, -64, -45, -67, -73,  14, -60,  -5, -22, -64, -62, -59, -63, -37,  12,  75, -66, -49;
/M: SY='S'; M=  42,  -7, -44, -42, -61,  35, -50, -16, -41, -54, -18, -33, -48, -40, -50,  70, -23, -21, -70, -55;
/M: SY='L'; M=  -4,  19, -72, -65,  24, -69, -63,   9, -60,  59,  44, -66, -66, -55, -59, -34,   3,  -2, -51, -36;
/M: SY='L'; M= -35, -50, -75, -68,   1, -77, -67,  39, -63,  66,  27, -71, -69, -58, -61, -57,   2,  -2, -54, -41;
/M: SY='I'; M= -47, -52, -76, -71,  49, -78, -58,  66, -66,  16,   3, -73, -72, -65, -67, -60, -43,  32, -43,  30;
/M: SY='A'; M=  62, -12, -58, -53, -54,  41, -58,  14, -49, -25,  18, -50, -54, -48, -57, -26, -15,  11, -68, -54;
/M:
/M: SY='W'; M= -42, -53, -75, -66,  40, -73,   5,  31, -63, -12,   7, -67, -70, -56, -61, -58, -46,  35,  94,  72;
/I:         I=-18; MI=0; MD=-57; IM=0; DM=-57;
/M: D=-18;
/I:         I=-18; MI=0; MD=-57; IM=0; DM=-57;
/M: SY='E'; M= -24, -74,  26,  60, -31, -29,  25, -51,  16, -66, -55,  11, -31,  27,  22, -11, -32, -48, -67, -27; D=-18;
/I:         I=-18; DM=-57;
/M: SY='D'; M= -42, -65,  48,   0, -25,  17,  13, -13,  14, -31, -10,  25, -36,  -5,   0,   3,  -2, -51, -58,  24; D=-18;
/I:         I=-18; DM=-57;
/M: SY='G'; M= -30, -66, -30, -10, -75,  90, -53, -61, -28, -72, -62, -16, -60, -23, -23, -14, -41, -41, -71, -69; D=-18;
/I:         I=-18; MI=0; MD=-57; IM=0; DM=-57;
/M: SY='P'; M=  22, -14, -53, -48,   8, -22, -53, -61, -45, -60, -58, -41, 108, -48, -59, -29, -32, -54, -58,  10;
/M: SY='Q'; M= -35, -70, -39,   2, -59, -56,  72, -66,  17, -42, -27, -23, -53,  76,  54,  13, -39, -61, -56,  -6;
/M: SY='L'; M= -48, -50, -79, -71, -25, -82, -70,  24, -65,  76,  -3, -77, -71, -60, -62, -64, -45,  13, -55, -44;
/M: SY='Y'; M= -56, -61, -77, -65,  75, -74, -20, -26, -63, -15, -36, -65, -74, -57, -58, -57, -55, -43,  39, 108;
/M: SY='Q'; M= -33,  -4, -14,  36, -52, -59,  35, -51,  28, -24,  53, -35, -52,  78,  -2, -24, -30, -50, -53,   8;
/I:         I=-25; MI=-81; MD=-81; IM=-81;
/M: SY='T'; M= -26,  42, -51, -50, -16, -56, -56,   4, -47,  -9,  -2, -13, -54, -46, -52,  26,  73,  25, -63, -47; D=-25;
/I:         I=-25; DM=-81;
/M: SY='D'; M= -49,  27,  93,  50, -76, -52, -40, -67, -33, -72, -63,  -1, -50,   1, -47, -33, -27, -43, -77, -68;
/M: SY='P'; M= -44, -68, -50, -46, -80, -61, -60, -72, -42, -71, -69, -58, 127, -47, -61, -43, -46, -64, -73, -71;
/M: SY='S'; M=  32, -41, -36, -34, -63, -23, -44, -60, -34, -63, -50,  -7, -44, -33, -43,  92, -13, -49, -72, -54;
/M:
/M: SY='T'; M=   9, -49, -18, -25, -24, -25,   6,   8, -40, -24, -27,  45, -54,   4, -46,  16,  50,  -8, -56,  25;
/M: SY='Y'; M= -48, -18, -67, -60,  58, -67, -27, -19, -58,  -7, -36, -24,  -3, -54, -57,   8, -45,  -5, -18,  96;
/M: SY='Y'; M= -17, -12, -60, -56,  54, -17,   5,   7, -52, -12,   5,  -6, -64, -30, -27,   5,   0,   0,  55,  59;
/M: SY='E'; M=  17, -63,  12,  54, -73,  51, -43, -70, -22, -69, -57, -17,   6,   4,   1,  11, -31, -61, -70, -62;
/M: SY='W'; M= -56,  38, -77, -64,  28, -70,  20, -46, -62, -32,   7, -63, -71, -50, -59, -58, -55, -30, 125,  93;
/M: SY='K'; M= -44, -71, -17, -17,  11, -42,  22, -61,  83, -47, -47,   6, -49,  24,   7, -21, -41, -50,   8,   2;
/I:         I=-25; MI=-81; MD=-81; IM=-81;
/M: SY='A'; M=  85, -17, -53, -45, -64,  33, -54, -52, -43, -54, -46, -47, -47, -43, -52,  -9, -33, -37, -70, -56; D=-25;
/I:         I=-25; DM=-81;
/M: SY='T'; M=  10,  38, -46, -44, -22, -52, -49, -13,   7, -35,  -5,  26, -53, -14, -28, -15,  67,  17,  14, -47;
/M: SY='A'; M=  77,  25, -49, -42, -63, -17, -51, -51, -40, -54, -45, -41, -45, -39, -49,  48,  -4, -37, -70, -54;
/M: SY='I'; M=   0, -47, -67, -64, -36, -68, -68,  77, -59,  -3,  32, -64, -64, -58, -63, -33,  20,  27, -65, -47;
/M:
/M: SY='K'; M=  28, -36, -43, -29, -63,  -9, -43, -38,  46, -31, -12, -10,   0,   2,  32,  42, -25, -20, -69, -54;
/I:         I=-25; MI=0; MD=-81; IM=0; DM=-81;
/M: SY='G'; M=  -2, -64, -14, -30, -69,  56,   9, -71,  32, -58, -56,  48, -55, -31,  32,   0, -40, -64, -16, -57;
/M: SY='S'; M=   5, -56, -14,   0, -41, -18,   2, -61,  11, -60, -31, -17, -49,  34,  48,  58,  -6, -41, -63, -13;
/M: SY='Q'; M= -28, -65,  -5,  25, -60,  -9, -31, -30,  13, -29, -39,  14,   3,  84, -15,  -9,   2, -19, -57,  -6;
/M: SY='A'; M=  48, -48,   4,  26, -64,   6, -47, -39, -37, -43, -45,   5,   9, -21, -47,  28,  20,  -2, -71, -56;
/M: SY='A'; M=  77, -38, -58, -48, -55, -21, -37,   1, -46, -35, -24, -53, -49, -45, -53,  -8, -16,  31, -70, -51;
/M: SY='K'; M= -41,  -3, -27,  -8, -60, -50, -38, -11,  50, -34,  30,  -2, -53,  48,  49, -34,  22,  -8, -64, -52;
/M: SY='T'; M=  12, -50,  -1,  46, -66, -30, -41, -55, -17, -59, -47,  21, -46,  -5, -39,  36,  64, -42, -70, -56;
/M: SY='Y'; M= -39, -60, -49,  31,  67, -66, -11,  -5, -49, -15,  28,  -6, -65, -41, -53, -24, -30,  -8,  14,  70;
/M: SY='L'; M= -51, -52, -79, -71,  34, -81, -65,  20, -65,  72,  29, -76, -72, -60, -62, -64, -47, -17, -47, -32;
/M: SY='E'; M= -42, -80, -10,  99, -74, -59, -22, -70,  13, -58, -55, -33, -46,  29, -11, -25, -42, -54, -68, -58;
/M: SY='K'; M= -34, -74,   2,  32, -73, -53, -35, -68,  82, -65, -29,   5, -46,  27,  32, -20, -39, -62, -70, -57;
/M: SY='H'; M= -38, -68,   5,  33, -58, -41,  54, -38,  32,   3, -41,  48, -54,  13,  29, -30, -24, -41, -66, -46;
/I:         I=-17; MD=-53;
/M: SY='Y'; M= -43, -63, -79, -65,  43, -77, -27, -23, -63,  -9,  18, -68, -76, -17, -60, -59, -41, -15,  32, 100; D=-17;
/I:         I=-17; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='K'; M= -25, -68,  12,  20, -11, -37,  27, -35,  33, -22,   0,  13,  -4,  -9,  16,   6,  -5, -55, -68, -49; D=-17;
/I:         I=-17; DM=-53;
/M: SY='E'; M= -17, -64,  36,  55,  -7, -31, -42, -25,  11, -46, -52,  -3,  16, -21, -18,  32,  -4, -54, -68, -52; D=-17;
/I:         I=-17; DM=-53;
/M: SY='D'; M= -21, -68,  60,  34,  30,   7,  -1, -27, -20, -57, -53,   0,  -5, -24, -49,  -1, -18, -37, -59,  -6; D=-17;
/I:         I=-17; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='M'; M= -13,  27, -68, -23, -41, -44, -62,  -5, -58,  37,  77, -63, -22, -50, -61,   5, -20, -19, -62, -31; D=-17;
/I:         I=-17; DM=-53;
/M: SY='T'; M= -24, -50,  22,  14, -67, -19, -42, -53, -15, -61, -49,  32, -34, -31, -27,  50,  67, -47, -72, -57;
/M: SY='L'; M= -19,  30, -30,   6,  -5, -45, -53,   3, -14,  41,  16, -56,   0, -11,   3, -27, -23,   9,  14,  -8;
/M: SY='E'; M= -12, -33,  57,  62, -74, -43, -24, -69,  29, -68, -57,  12, -48,  12,  20, -19,  -9, -63, -72, -60;
/M: SY='E'; M= -23, -75,  55,  81, -74, -25, -35, -70,  -1, -57, -56, -26, -47,  37, -21, -11, -32, -65, -70, -61;
/M: SY='A'; M=  64,  15, -56, -50, -53,  17, -57, -21, -47,  13, -33, -48, -51, -46, -54, -10,  29, -13, -66, -53;
/M: SY='I'; M= -23, -48, -64, -13, -37, -72, -68,  68, -23,   7,  10, -66, -65, -38, -58, -39, -26,  52, -66, -47;
/M: SY='K'; M= -13, -65,  -1,  33, -59, -41,  43, -27,  57, -11,  14, -16, -50,  28,   6, -35,  -8, -19, -65, -47;
/M: SY='L'; M= -31, -55, -21,  19,  -6, -66,  48,   6, -31,  50,  13, -47, -60, -23, -48, -14,  22, -20, -56, -38;
/M: SY='A'; M=  78, -40, -55, -47, -60,  27, -56, -23, -45, -47, -41, -49, -49, -45, -54,  -8, -16,  13, -70, -55;
/M: SY='I'; M=   9, -48, -72, -66, -32, -49, -69,  57, -61,  50,   7, -70, -66, -59, -63, -36, -40,  24, -61, -46;
/M: SY='K'; M= -10, -17, -24,  11, -46, -54, -39, -33,  55,  -3, -20, -17, -51,   2,  53,  11,   3, -41, -65, -29;
/M: SY='A'; M=  65,  13, -57, -50, -34, -42, -10,  34, -47, -35, -32, -50, -52, -46, -54,  -7,  30,  10, -67, -48;
/M: SY='L'; M= -49, -50, -79, -71, -25, -82, -69,  39, -65,  73,  25, -77, -71, -60, -62, -64, -45,  -6, -55, -44;
/M: SY='Y'; M=   2, -57, -49, -36, -24, -25,  -3, -26,  36,   0,  14,  -9, -54,  24,  24,  23, -20, -26,  -8,  48;
/M: SY='E'; M=   7, -59,   5,  52, -65, -25, -39, -31,  34, -42,  -7, -32, -47,  39, -25,  36,   0, -25, -67, -55;
/I:         I=-22; MI=0; MD=-71; IM=0; DM=-71;
/M: SY='T'; M=  28, -40, -54, -50, -53, -14, -59, -15, -47, -29, -31, -44, -52, -47, -53,  20,  59,  53, -69, -51;
/M: SY='M'; M= -28, -52, -42, -54,   8, -66,  49,  -5, -50,  43,  60, -15, -64, -44, -18, -24,  15,  16, -54, -25;
/M: SY='E'; M= -23, -72,  56,  62, -76,   3, -39, -72,   0, -72, -58, -27,  21,  39, -33,  12, -40, -67, -72, -63;
/I:         I=-18; MI=0; MD=-59; IM=0; DM=-59;
/M: SY='S'; M=-110,-134,-124,-122,-145, -59,-128,-125, -74,-137,-128, -69,-135,-117, -51, -24, -70, -62,-154,-138; D=-18;
/I:         I=-18; DM=-59;
/M: SY='E'; M= -22, -76,  12,  42, -82,  20, -37, -19, -34, -73, -65, -16, -66, -41, -35, -13,  11, -51, -86, -74; D=-18;
/I:         I=-18; DM=-59;
/M: SY='E'; M= -26, -76,  42,  57, -79,  -9, -43, -62,  43, -74, -62, -19, -52,   1, -23,   6, -29, -68, -78, -66; D=-18;
/I:         I=-18; MI=0; MD=-59; IM=0; DM=-59;
/M: SY='L'; M= -15, -51, -60, -24,  34, -65, -57,   3, -36,  52,  26, -14, -15, -49, -55,   1,   3,   3, -51, -33;
/M: SY='T'; M= -15, -56,  17, -19, -68,   8, -39, -59,  45, -52, -50,  45, -49, -28,   3,  22,  49, -45, -72, -58;
/M: SY='P'; M=  30, -53,  24,   7, -61,  -4,  -2, -33,  -5, -38, -28, -13,  52, -10, -44,  36, -10, -21, -68, -24;
/M: SY='K'; M= -16, -63,  29,  38, -53, -15, -26, -62,  57, -64, -29,  29, -47,   1, -23,  15,  19, -45, -71, -57;
/I:         I=-24; MI=0; MD=-77; IM=0; DM=-77;
/M: SY='N'; M= -27, -64,  13,  38, -71,   6, -30, -68,  15, -54, -55,  80, -52,  12,  -7,  -4,   4, -63, -72, -59;
/M: SY='I'; M= -34,   2, -73, -68, -20, -76, -72,  57, -63,  34,   6, -70, -20, -61, -65, -54,  -4,  50, -62, -45;
/M: SY='E'; M= -39, -72,  13,  95, -74, -34, -34, -70, -21, -68, -56, -30, -46,  17, -34,  13,   3, -62, -69, -59;
/M: SY='I'; M= -42, -47, -74, -49,  -6, -77, -70,  57, -62,  29,  48, -72, -69, -59, -64, -58, -38,  54, -60, -42;
/M: SY='A'; M=  63, -29, -51, -48, -64,  57, -54, -50, -45, -45, -27, -41, -51, -45, -54,  21, -14, -13, -70, -58;
/I:         I=-23; MI=0; MD=-74; IM=0; DM=-74;
/M: SY='W'; M= -42, -24, -69, -61,   1, -52, -57,  41, -25, -18, -27, -62, -65, -54, -12, -27,  14,  50,  82,  22; D=-23;
/I:         I=-23; DM=-74;
/M: SY='V'; M=  -5,  14, -73, -65, -27, -70, -69,  45, -34,  14,  31, -69, -65, -57, -61, -51, -35,  65, -62, -26;
/I:         I=-23; E1=0; IE=-255; DE=-74;
Post-processing
COMPETES_SEQ_WITH: PS51476;
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 212 hits in 212 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 212 hits in 212 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 23
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 90.21 %
Comments
  • MATRIX_TYPE: protein_domain
  • Scaling database: UniProtKB/Swiss-Prot: reversed
  • Matrix author: N_Hulo
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
PSA1A_ARATH (P34066), PSA1B_ARATH (O23712), PSA1_BOVIN  (Q3T0X5), 
PSA1_CAEEL  (O44156), PSA1_CHICK  (O42265), PSA1_DICDI  (Q27562), 
PSA1_DROME  (P12881), PSA1_HALMA  (Q5V2X8), PSA1_HALVD  (Q9V2V6), 
PSA1_HUMAN  (P25786), PSA1_MACFA  (Q4R3H2), PSA1_MOUSE  (Q9R1P4), 
PSA1_ORYSJ  (P52428), PSA1_PONAB  (Q5REN2), PSA1_RAT    (P18420), 
PSA1_RHOER  (Q53080), PSA1_SCHPO  (O94517), PSA1_TRYBB  (Q9GU37), 
PSA1_TRYBR  (O96788), PSA1_TRYCR  (P92188), PSA1_YEAST  (P21243), 
PSA2A_ARATH (O23708), PSA2B_ARATH (Q8L4A7), PSA2_BOVIN  (Q3T0Y5), 
PSA2_CAEEL  (Q27488), PSA2_CARAU  (O73672), PSA2_DICDI  (Q54DM7), 
PSA2_DROME  (P40301), PSA2_HALMA  (Q5V1D4), PSA2_HALVD  (Q9V2V5), 
PSA2_HUMAN  (P25787), PSA2_MOUSE  (P49722), PSA2_NEUCR  (Q8X077), 
PSA2_ORYSI  (A2YVR7), PSA2_ORYSJ  (Q10KF0), PSA2_RAT    (P17220), 
PSA2_RHOER  (Q53084), PSA2_SCHPO  (O94579), PSA2_TRYBB  (Q9U793), 
PSA2_XENLA  (P24495), PSA2_YEAST  (P23639), PSA3_ACACA  (P90513), 
PSA3_ARATH  (O23715), PSA3_BOVIN  (Q58DU5), PSA3_CAEEL  (Q09583), 
PSA3_DICDI  (Q27563), PSA3_DROME  (Q9V5C6), PSA3_ENCCU  (Q8SRU7), 
PSA3_HUMAN  (P25788), PSA3_MOUSE  (O70435), PSA3_ORYSJ  (Q9LSU0), 
PSA3_RAT    (P18422), PSA3_SCHPO  (Q09682), PSA3_SPIOL  (O24362), 
PSA3_YEAST  (P23638), PSA4A_ORYSI (A2Y9X7), PSA4A_ORYSJ (P0C1G8), 
PSA4B_ORYSI (P0C8Y9), PSA4B_ORYSJ (Q5VRG3), PSA4L_DROME (Q9VA12), 
PSA4_ARATH  (O81148), PSA4_BOVIN  (Q3ZCK9), PSA4_CAEEL  (Q9N599), 
PSA4_DICDI  (P34119), PSA4_DROME  (P18053), PSA4_HUMAN  (P25789), 
PSA4_MACFA  (Q4R932), PSA4_MOUSE  (Q9R1P0), PSA4_PETHY  (O82530), 
PSA4_RAT    (P21670), PSA4_SCHPO  (Q10329), PSA4_SPIOL  (P52427), 
PSA4_YEAST  (P40303), PSA5A_ARATH (O81149), PSA5B_ARATH (Q42134), 
PSA5_BOVIN  (Q5E987), PSA5_CAEEL  (Q95008), PSA5_DICDI  (Q55G04), 
PSA5_DROME  (Q95083), PSA5_ENCCU  (Q8SRU3), PSA5_ENTHI  (Q94561), 
PSA5_HUMAN  (P28066), PSA5_MOUSE  (Q9Z2U1), PSA5_ORYSJ  (Q9LSU1), 
PSA5_RAT    (P34064), PSA5_SCHPO  (Q9UT97), PSA5_SOYBN  (Q9M4T8), 
PSA5_TRYBB  (Q9XZG5), PSA5_YEAST  (P32379), PSA6A_ARATH (O81146), 
PSA6B_ARATH (O81147), PSA6_BOVIN  (Q2YDE4), PSA6_CAEEL  (O17586), 
PSA6_DICDI  (Q54XM7), PSA6_DROME  (Q9XZJ4), PSA6_ENCCU  (Q8SQS5), 
PSA6_HUMAN  (P60900), PSA6_MOUSE  (Q9QUM9), PSA6_ORYSJ  (Q9LSU3), 
PSA6_RAT    (P60901), PSA6_SCHPO  (O14250), PSA6_SOYBN  (O48551), 
PSA6_TOBAC  (Q9XG77), PSA6_YEAST  (P40302), PSA71_DROME (P22769), 
PSA71_DROVI (O16811), PSA72_DROME (Q24178), PSA73_DROME (Q27575), 
PSA73_DROVI (O16812), PSA7A_ARATH (P30186), PSA7A_ORYSI (A2YXU2), 
PSA7A_ORYSJ (Q6YT00), PSA7A_XENLA (Q9PVY6), PSA7B_ARATH (O24616), 
PSA7B_ORYSI (A2Z3I9), PSA7B_ORYSJ (Q0J006), PSA7B_XENLA (Q9PVQ1), 
PSA7L_HUMAN (Q8TAA3), PSA7L_MACFA (Q4R7D9), PSA7L_MOUSE (Q9CWH6), 
PSA7_BOVIN  (Q3ZBG0), PSA7_CAEEL  (Q95005), PSA7_CARAU  (Q9PTW9), 
PSA7_CHICK  (O13268), PSA7_CICAR  (Q9SXU1), PSA7_DICDI  (P34120), 
PSA7_ENCCU  (Q8SQP9), PSA7_HUMAN  (O14818), PSA7_MOUSE  (Q9Z2U0), 
PSA7_PONAB  (Q5RDH8), PSA7_RAT    (P48004), PSA7_SCHPO  (O59770), 
PSA7_SOLLC  (O24030), PSA7_TRYBB  (Q9NDA2), PSA7_YEAST  (P21242), 
PSA_ACIC1   (A0LU51), PSA_AERPE   (Q9YC01), PSA_ARCFU   (O29760), 
PSA_FRAAA   (Q0RLT6), PSA_GEOOG   (D2S6E3), PSA_HALS3   (B0R2T2), 
PSA_HALSA   (P57697), PSA_HALWD   (Q18K08), PSA_KINRD   (A6W971), 
PSA_KRIFD   (D2Q4H5), PSA_METAC   (Q8TPX5), PSA_METB6   (A7I9C7), 
PSA_METBF   (Q469M6), PSA_METJA   (Q60177), PSA_METKA   (Q8TYB7), 
PSA_METM5   (A4FZT6), PSA_METM6   (A9A846), PSA_METM7   (A6VIP0), 
PSA_METMA   (Q8PTU1), PSA_METMJ   (A3CW55), PSA_METMP   (Q6M0L9), 
PSA_METPE   (B8GEZ3), PSA_METS3   (A5UJS2), PSA_METS5   (A4YCU9), 
PSA_METTE   (Q59565), PSA_METTH   (O26782), PSA_METVS   (A6URN9), 
PSA_MYCA1   (A0QFB6), PSA_MYCA9   (B1MAI3), PSA_MYCBO   (Q7TZ14), 
PSA_MYCBP   (A1KKF2), PSA_MYCBT   (C1AQ25), PSA_MYCGI   (A4TB55), 
PSA_MYCLB   (B8ZRF4), PSA_MYCLE   (Q9S375), PSA_MYCMM   (B2HFV5), 
PSA_MYCPA   (Q73YW9), PSA_MYCS2   (A0QZ46), PSA_MYCTA   (A5U4D5), 
PSA_MYCTF   (A5WP83), PSA_MYCTK   (C6DPV2), PSA_MYCTU   (O33244), 
PSA_MYCUA   (A0PQT2), PSA_MYCVP   (A1TAP3), PSA_NATPD   (Q3IPJ1), 
PSA_NOCSJ   (A1SK14), PSA_PICTO   (Q6L0W3), PSA_PYRAB   (Q9V122), 
PSA_PYRAE   (Q8ZVM1), PSA_PYRFU   (Q8U0L6), PSA_PYRHO   (O59219), 
PSA_PYRKO   (Q5JIU9), PSA_RHOE4   (C0ZZU6), PSA_RHOOB   (C1ASP6), 
PSA_RHOSR   (Q0SIG0), PSA_SACEN   (A4FBY2), PSA_SACVD   (C7MWV6), 
PSA_STRAW   (Q828I7), PSA_STRCO   (Q7AKQ6), PSA_STRGG   (B1W307), 
PSA_STRRD   (D2ATV0), PSA_STRSW   (C9Z4D1), PSA_SULAC   (Q4JB24), 
PSA_SULIA   (C3N5R0), PSA_SULIK   (C4KHD9), PSA_SULIL   (C3MQ43), 
PSA_SULIM   (C3MVG1), PSA_SULIN   (C3NHC6), PSA_SULIY   (C3NEC6), 
PSA_SULSO   (Q9UXC6), PSA_SULTO   (Q975G5), PSA_THEAC   (P25156), 
PSA_THEGJ   (C5A2C2), PSA_THEK1   (O24733), PSA_THEON   (B6YSH9), 
PSA_THESM   (C6A459), PSA_THEVO   (Q97BZ8)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
PSA_ACIFD   (C7LYP8), PSA_ACTMD   (C6WID9), PSA_ARTAT   (A1R6Q8), 
PSA_ARTCA   (B8H8L7), PSA_ARTS2   (A0JWY7), PSA_CATAD   (C7PVV3), 
PSA_FRASC   (Q2J9Q4), PSA_FRASN   (A8LH53), PSA_GORB4   (D0LDT2), 
PSA_JONDD   (C7R404), PSA_MYCSJ   (A3Q192), PSA_MYCSK   (A1UHS6), 
PSA_MYCSS   (Q1B798), PSA_NAKMY   (C8XAQ3), PSA_NOCFA   (Q5YUX3), 
PSA_RENSM   (A9WSI0), PSA_SALAI   (A8M2A4), PSA_SALTO   (A4X745), 
PSA_SANKS   (D1BHT8), PSA_STANL   (D3Q556), PSA_THECD   (D1A2T0), 
PSA_THEFY   (Q47NZ5), PSA_XYLCX   (D1BS27)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1FNT; 1G0U; 1G65; 1IRU; 1J2P; 1J2Q; 1JD2; 1PMA; 1Q5Q; 1Q5R; 1RYP; 1VSY; 1YA7; 1YAR; 1YAU; 1Z7Q; 2F16; 2FAK; 2GPL; 2H6J; 2KU1; 2KU2; 2Z5C; 2ZCY; 3BDM; 3C91; 3C92; 3D29; 3DY3; 3DY4; 3E47; 3GPJ; 3GPT; 3GPW; 3H4P; 3HYE; 3IPM; 3JRM; 3JSE; 3JTL; 3L5Q; 3MG0; 3MG4; 3MG6; 3MG7; 3MG8; 3NZJ; 3NZW; 3NZX; 3OEU; 3OEV; 3OKJ; 3SDI; 3SDK; 3SHJ; 3TDD; 3UN4; 3UN8; 3UNB; 3UNE; 3UNF; 3UNH; 4B4T; 4FZC; 4FZG; 4G4S; 4GK7; 4INR; 4INT; 4INU;

View entry in original PROSITE format
View entry in raw text format (no links)


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