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| Entry: PS51475 |
| General information about the entry | |
|---|---|
| Entry name | PROTEASOME_A_2 |
| Accession number | PS51475 |
| Entry type | MATRIX |
| Date | JAN-2010 (CREATED); JAN-2010 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00326 |
| Associated ProRule | PRU00808 |
| Name and characterization of the entry | |
| Description | Proteasome A-type subunit profile. |
| Matrix / Profile | /GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=183;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=178;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.9153111; R2=0.0073357; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=898; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=625; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-24; D=-80; I=-80; I0=-24; B1=-300; E1=-300; MI=-255; MD=-255; IM=-255; DM=-255;
A C D E F G H I K L M N P Q R S T V W Y
/I: B1=0; BI=-255; BD=-255;
/M:
/M: SY='S'; M= -2, -48, -46, -46, -54, 37, -51, 0, -44, -11, -39, -19, -53, -14, -51, 55, 39, -20, 43, -50;
/M: SY='T'; M= 28, 0, -46, -44, -61, -48, -52, -40, -41, -31, -38, -13, 6, -42, -48, -1, 89, -13, -68, -53;
/M: SY='A'; M= 59, 40, -50, -44, -59, -38, -53, -40, -42, -37, -6, -40, -48, -41, -50, 45, 39, 1, -68, -53;
/M: SY='V'; M= -40, -46, -77, -70, -35, -78, -75, 55, -64, 30, 1, -74, -68, -63, -66, -59, -36, 66, -65, -46;
/M: SY='G'; M= 25, -59, -49, -57, -74, 94, -56, -74, -50, -76, -61, -37, -58, -55, -62, -29, -49, -64, -70, -68;
/M: SY='I'; M= -33, -47, -75, -70, -33, -78, -74, 68, -65, 29, -4, -74, -69, -64, -67, -59, -38, 54, -64, -46;
/M: SY='K'; M= -32, -33, -46, -26, -64, -58, -37, -46, 72, -14, -24, -37, -51, 10, 71, -32, -25, -31, -67, -53;
/M: SY='C'; M= 30, 70, -49, -50, -27, 44, -54, -53, -47, -56, -48, -11, -53, -47, -54, 31, 42, -30, -15, -53;
/M: SY='K'; M= 6, -63, -34, 10, -71, -23, -23, -65, 78, -64, -51, 23, 3, -18, 3, 13, 0, -57, -71, -56;
/M: SY='D'; M= -35, -70, 85, 41, -75, -44, -36, -69, -32, -74, -63, 49, -50, -11, -44, -9, 10, -67, -78, -66;
/M: SY='G'; M= 10, 60, -52, -56, -11, 76, 41, -40, -52, -63, -54, -35, -60, -51, -59, -4, -31, -49, -59, -11;
/M: SY='V'; M= 26, -41, -70, -62, -44, -62, -72, 37, -58, -20, -21, -66, -61, -58, -62, -43, -14, 76, -69, -48;
/M: SY='V'; M= -28, 31, -77, -68, -41, -74, -77, 20, -63, 7, -18, -72, -65, -62, -65, -53, -32, 84, -67, -47;
/M: SY='L'; M= -47, -50, -79, -71, 4, -81, -70, 35, -65, 68, 5, -76, -71, -61, -63, -63, -44, 26, -54, -40;
/M: SY='A'; M= 60, -9, -59, -54, -21, 33, -60, 14, -50, -22, -34, -53, -55, -51, -58, -28, -13, 31, -66, -50;
/M: SY='V'; M= 44, 3, -57, -51, -53, -17, -60, -17, -48, -27, -31, -48, -53, -48, -54, 17, 38, 55, -69, -51;
/M: SY='E'; M= -36, -74, 38, 84, -64, -60, -24, -55, -23, 1, -43, -32, -49, 48, -34, -35, -43, -41, -65, -57;
/M: SY='K'; M= -43, -4, -39, -21, -73, -53, 1, -68, 95, -65, -51, 2, -46, -13, 30, -34, -40, -63, -71, -55;
/M: SY='R'; M= -44, -71, -48, -29, -61, -59, -24, -40, 67, -3, -41, -37, -53, -10, 76, -8, -41, -38, -67, -53;
/M: SY='V'; M= 8, -46, -51, -49, -32, -54, -34, 33, -15, -10, -28, 13, -13, -26, -50, 34, -1, 48, -67, -48;
/I: I=-25; MI=0; MD=-81; IM=0; DM=-81;
/M: SY='T'; M= 4, -49, -49, -42, -58, -37, -32, -6, -20, -25, -37, -32, 54, 13, 3, 6, 60, 17, -67, -53;
/M: SY='S'; M= 2, -49, 40, -7, -66, -19, 0, -64, -34, -57, -53, -1, -4, -7, -43, 81, -10, -55, -73, -55;
/M: SY='K'; M= -29, -69, -10, 29, -72, -42, -41, -35, 74, -62, -51, -26, 46, 11, 9, -7, -10, -47, -71, -58;
/M: SY='L'; M= -49, -51, -77, -69, -14, -80, -66, -8, -63, 80, 37, -39, -71, -57, -60, -63, -46, -18, -52, -43;
/M: SY='M'; M= -10, -51, -60, -46, -24, -44, -46, 18, -45, 38, 58, -54, -61, 42, -48, 13, -28, 7, -49, 24;
/M: SY='D'; M= -25, -20, 68, 57, -66, -52, -41, -35, -16, -33, -31, -3, -50, -3, -17, 16, -17, -3, -73, -60;
/M: SY='P'; M= 1, -59, 10, 22, -54, -32, 32, -36, -27, -58, -50, -17, 70, 16, -24, 21, 4, -11, -59, 17;
/I: I=-21; MD=-68;
/M: SY='Q'; M= -19, -60, 29, 19, -68, -4, -9, -61, -9, -55, -48, 9, -50, 50, 33, 43, 16, -36, -67, -55; D=-21;
/I: I=-21; MI=0; MD=-68; IM=0; DM=-68;
/M: SY='S'; M= -5, -49, -31, -43, -38, -39, -52, -57, -27, -61, -10, -21, -6, -41, -49, 71, 50, -36, -75, -57; D=-21;
/I: I=-21; MI=0; MD=-68; IM=0; DM=-68;
/M: SY='V'; M= -22, -54, -59, -64, -32, -48, -62, 39, -60, -10, -26, 29, -44, -59, -64, -9, -10, 48, -71, -19; D=-21;
/I: I=-21; DM=-68;
/M: SY='E'; M= -41, -69, -16, 66, -70, -40, 5, -63, 25, -63, -52, -9, -3, 13, 46, 1, 17, -34, -69, -54;
/M:
/M: SY='I'; M= -36, -49, -74, -70, -32, -78, -24, 76, -64, 25, 27, -73, -70, -62, -66, -59, -39, 39, -63, -45;
/M: SY='F'; M= -33, 21, -60, -22, 71, -43, 51, -7, -40, -19, -13, -50, -66, 4, -51, -2, -46, -9, -27, 64;
/M: SY='K'; M= -19, -7, -37, 19, -58, -54, 21, -42, 51, -14, 26, 14, 21, 28, 11, 1, -14, -26, -7, -38;
/M: SY='I'; M= -30, -10, -75, -71, -32, -77, -74, 73, -65, 32, -12, -74, -69, -65, -67, -59, -32, 43, -63, -46;
/M: SY='D'; M= -37, -67, 92, -7, -68, -34, 5, -66, -37, -72, -62, 31, -50, -32, -48, 4, 28, -64, -74, -18;
/M: SY='D'; M= -32, -72, 73, 35, -71, -51, -16, -70, 21, -70, -59, 14, -3, 11, 26, -11, -8, -66, -16, -40;
/M: SY='H'; M= -39, -72, 0, -32, -47, -34, 125, -71, -28, -69, -52, 44, -58, -23, -24, -16, -22, -72, -54, 17;
/M: SY='I'; M= -16, -13, -71, -67, -36, -72, -71, 71, -62, 4, 32, -69, -67, -60, -65, -34, -15, 51, -65, -46;
/M: SY='G'; M= 22, 15, -52, -58, -59, 85, -57, -45, -52, -51, -33, -41, -59, -55, -62, -24, -46, -5, -66, -33;
/M: SY='C'; M= 15, 92, -73, -66, -42, -62, -67, 18, -60, 21, 63, -65, -64, -55, -63, -44, -24, 28, -59, -50;
/M: SY='A'; M= 69, 32, -55, -47, -57, -24, -56, -32, -45, -29, -37, -47, -49, -44, -52, 28, 9, 26, -69, -52;
/M: SY='F'; M= -4, -13, -65, -59, 43, -63, -51, 30, -55, -7, 42, -56, -28, -52, -58, 5, 21, 32, -44, 34;
/M: SY='A'; M= 66, -39, -44, -39, -61, -32, -48, -31, -38, -53, -44, -13, -45, -37, -46, 59, 31, -36, -71, -53;
/I: I=-21; MI=0; MD=-65; IM=0; DM=-65;
/M:
/M: SY='L'; M= -48, -53, -68, -61, -5, -73, 17, 22, -54, 62, 59, -15, -23, -49, -11, -37, -44, -19, -54, -40;
/M: SY='T'; M= 13, -45, -55, -53, -46, 5, -57, 28, -33, -8, 7, -21, -56, -48, -53, -7, 56, 34, -64, -13;
/M: SY='A'; M= 75, -43, -51, -43, -66, -5, -54, -55, -41, -57, -49, -47, 63, -42, -52, 20, -32, -41, -71, -58;
/M:
/M: SY='A'; M= 73, -23, -52, -47, -20, 44, -50, -54, -44, -55, -47, -44, -49, -44, -53, 13, -20, -41, -62, -1;
/M: SY='R'; M= -50, -77, -44, -23, -30, -60, -30, -71, 22, -61, -51, 27, -59, -3, 100, -38, -43, -64, -66, -50;
/M: SY='V'; M= 8, -47, -55, -46, -10, -58, -3, 37, -34, -15, 3, -21, -57, 27, -49, 13, 18, 47, -62, -43;
/M: SY='L'; M= -30, -51, -73, -60, -27, -78, -63, 17, -57, 74, 8, -71, -68, 16, -56, -59, -45, 1, -54, -45;
/M: SY='V'; M= 3, 13, -66, -61, -42, -64, -69, 57, -31, -16, -21, -61, -62, -57, -60, 4, -11, 61, -68, -48;
/M: SY='N'; M= -30, -67, 62, 17, -69, -46, -19, -68, 11, -47, -55, 62, -51, 27, 20, 11, -22, -64, -71, -41;
/M: SY='R'; M= -42, -70, -51, -14, 30, -63, 35, -27, 30, -49, -44, -33, -60, 13, 69, -42, -17, -45, -38, 58;
/M: SY='A'; M= 81, -39, -57, -46, -53, -10, -54, -38, -44, 3, 25, -51, -49, -42, -52, 1, -32, -23, -67, -52;
/M: SY='R'; M= -49, -78, -50, -27, -64, -63, -29, -70, 21, -54, -48, -36, -58, 38, 102, -40, -44, -63, -62, -14;
/M: SY='V'; M= -15, -53, -9, -14, -46, -16, -28, 9, 5, 0, 6, 20, -56, 20, -5, 17, 3, 28, -13, -2;
/M: SY='E'; M= -29, -71, -16, 90, -24, -59, -6, -9, -22, -44, -46, -36, -49, 40, -34, -8, -29, -21, -14, -50;
/M: SY='C'; M= 74, 85, -41, -48, -63, -25, -56, -49, -46, -51, -45, -47, -49, -45, -54, 14, 3, -35, -66, -55;
/M: SY='Q'; M= 23, -57, -41, -11, -57, -51, -7, -16, -15, -5, 20, -19, -50, 93, -18, 7, -8, -26, -57, -49;
/M: SY='N'; M= -35, -57, -10, 20, -60, -46, -32, -13, -7, -55, -29, 61, -52, 35, 20, 45, -1, -10, -66, -23;
/I: I=-25; MI=0; MD=-81; IM=0; DM=-81;
/M: SY='Y'; M= -52, -64, -49, -10, 42, -60, 86, -54, -48, -50, -46, 21, -65, -36, -45, -8, -48, -57, 72, 86;
/M: SY='R'; M= -31, -70, -45, 3, -36, -59, -14, -60, 43, -17, -44, -14, -55, 8, 81, -15, -16, -56, 29, -4;
/M: SY='Y'; M= -47, -57, -38, -34, 51, -69, 5, -13, -2, 38, -11, -38, -65, -13, -17, -10, -30, -3, 11, 56;
/M: SY='T'; M= -36, -52, -7, -36, -32, -53, -43, -5, 18, -17, 20, 29, -53, 11, 11, 21, 50, 13, -65, -32;
/M: SY='Y'; M= -53, -59, -70, -60, 47, -70, 9, -39, -58, -22, -39, -11, -71, -51, -54, -53, -51, -15, 9, 116;
/M: SY='G'; M= -30, -69, 46, 31, -75, 63, -23, -75, 0, -76, -61, 30, -54, 15, -19, -26, -30, -70, -71, -65;
/M: SY='E'; M= -33, -69, 27, 76, -45, -56, -30, -63, -15, -60, -8, -21, -50, 15, 11, 11, -7, -58, -51, 47;
/M: SY='P'; M= -2, -64, 19, 18, -67, -55, -48, -61, -10, -39, -27, -8, 99, -3, -28, -29, -13, -45, -68, -20;
/M: SY='M'; M= -18, -49, -69, -63, -34, -70, -61, 61, -57, 6, 83, -43, -5, -36, -60, -52, -25, 32, -60, -21;
/M: SY='P'; M= -26, -59, -14, -34, -71, -2, -51, -63, -38, -43, -57, 3, 100, -41, -13, 21, 26, -56, -72, -63;
/M: SY='V'; M= -31, 54, -73, -68, -42, -33, -75, 37, -63, 6, -19, -67, -65, -62, -66, -50, -3, 71, -65, -48;
/M: SY='E'; M= -23, -70, 39, 77, -72, -34, -37, -53, 26, -58, -55, -28, -13, 4, -8, 13, -8, -49, -71, -59;
/M: SY='Y'; M= -20, -56, -32, -9, -27, -59, 9, -8, -19, -10, 11, 0, -57, 45, 26, 10, -4, 25, -46, 48;
/M: SY='L'; M= -34, 5, -77, -70, -16, -79, -70, 33, -64, 72, -5, -74, -70, -60, -62, -60, -23, 2, -55, -44;
/M: SY='T'; M= 47, 23, -55, -50, -54, -30, -58, -14, -47, -28, -12, -27, -52, -46, -53, 9, 49, 44, -68, -51;
/M: SY='K'; M= -41, -69, 11, 8, -68, -54, 7, -62, 63, -43, -46, -9, -48, 50, 46, 3, 5, -43, -66, -53;
/M: SY='R'; M= 1, -61, -25, 0, -20, -54, 3, -33, 27, -21, -44, 0, -14, -9, 55, 18, -27, -35, 27, 42;
/M: SY='I'; M= -42, -47, -75, -69, -32, -77, -71, 56, -63, 35, 37, -72, -68, -60, -64, -57, -17, 53, 18, -44;
/M: SY='C'; M= 66, 87, -54, -47, -65, 8, -55, -52, -45, -53, -45, -45, -50, 1, -53, 18, 1, -39, -64, -56;
/M: SY='D'; M= -25, -66, 82, 7, -53, -7, -38, -65, -27, -51, -19, 39, -51, 8, -14, 20, -10, -64, -75, -63;
/M: SY='Y'; M= -45, -55, -60, -37, -9, -69, 20, 24, 31, 34, 15, -28, -62, -12, -39, -48, -10, 18, -45, 46;
/M: SY='K'; M= 25, -52, -47, -35, -39, -49, -4, 2, 51, -24, 50, 4, -51, 14, -27, 13, -15, 9, -64, -27;
/M: SY='Q'; M= -42, -71, -36, -8, -63, -60, 47, -47, -15, -10, -30, -31, -50, 115, -19, -35, -41, -44, -50, -43;
/M: SY='Q'; M= 17, -55, -47, 14, -51, -12, -43, 5, 8, -11, 25, -27, -55, 38, 31, -35, 0, 20, -61, -15;
/M: SY='Y'; M= -35, 25, -61, -54, 46, -64, 49, -47, -51, -40, -43, -2, -22, -46, -22, -11, -30, -49, -14, 104;
/I: I=-17; MD=-53;
/M: SY='T'; M= -30, -42, -44, -44, -62, 11, -52, -26, -41, -49, -39, -30, -48, -42, -47, -5, 101, -31, -67, -54; D=-17;
/I: I=-17; MD=-53;
/M: SY='Q'; M= -42, -20, -24, 22, -64, -61, -20, -56, -16, 1, -30, -34, -50, 113, -21, -35, -42, -54, -52, -50; D=-17;
/I: I=-17; MD=-53;
/M: SY='Y'; M= -39, -28, -45, -9, 16, -20, 50, -44, -35, -54, -47, 14, -59, -7, 23, 43, -29, -28, -37, 70; D=-17;
/I: I=-17; MD=-53;
/M: SY='G'; M= 27, -57, -28, -41, -51, 70, -45, -66, -44, -68, -58, 9, -39, -49, -57, 12, -43, -48, 24, 31; D=-17;
/I: I=-17; MD=-53;
/M: SY='G'; M= -3, -61, 6, 6, -56, 80, -48, -41, -45, -70, -59, -35, -58, -45, -33, 3, -46, -62, 47, 9; D=-17;
/I: I=-17; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='M'; M= -1, -49, -58, -46, -47, -38, -52, -14, 14, 0, 56, -49, -58, -36, 37, 19, -22, 47, -66, -49;
/M: SY='R'; M= -50, -80, -53, -32, -69, -64, -30, -72, 2, -61, -51, -37, -45, -15, 110, -41, -45, -64, -67, -52;
/M: SY='P'; M= -44, -67, -50, -46, -77, -61, -60, -68, -43, -45, -65, -57, 125, -47, -60, -24, -45, -62, -73, -69;
/M: SY='F'; M= -58, -63, -79, -72, 100, -76, -39, -29, -69, 12, 3, -69, -77, -65, -64, -61, -57, -39, -16, 66;
/M: SY='G'; M= -27, -65, -48, -60, -76, 101, -56, -81, -52, -83, -66, -35, -61, -58, -64, -32, -53, -74, -70, -72;
/M: SY='V'; M= -3, 59, -71, -64, -45, -67, -73, 14, -60, -5, -22, -64, -62, -59, -63, -37, 12, 75, -66, -49;
/M: SY='S'; M= 42, -7, -44, -42, -61, 35, -50, -16, -41, -54, -18, -33, -48, -40, -50, 70, -23, -21, -70, -55;
/M: SY='L'; M= -4, 19, -72, -65, 24, -69, -63, 9, -60, 59, 44, -66, -66, -55, -59, -34, 3, -2, -51, -36;
/M: SY='L'; M= -35, -50, -75, -68, 1, -77, -67, 39, -63, 66, 27, -71, -69, -58, -61, -57, 2, -2, -54, -41;
/M: SY='I'; M= -47, -52, -76, -71, 49, -78, -58, 66, -66, 16, 3, -73, -72, -65, -67, -60, -43, 32, -43, 30;
/M: SY='A'; M= 62, -12, -58, -53, -54, 41, -58, 14, -49, -25, 18, -50, -54, -48, -57, -26, -15, 11, -68, -54;
/M:
/M: SY='W'; M= -42, -53, -75, -66, 40, -73, 5, 31, -63, -12, 7, -67, -70, -56, -61, -58, -46, 35, 94, 72;
/I: I=-18; MI=0; MD=-57; IM=0; DM=-57;
/M: D=-18;
/I: I=-18; MI=0; MD=-57; IM=0; DM=-57;
/M: SY='E'; M= -24, -74, 26, 60, -31, -29, 25, -51, 16, -66, -55, 11, -31, 27, 22, -11, -32, -48, -67, -27; D=-18;
/I: I=-18; DM=-57;
/M: SY='D'; M= -42, -65, 48, 0, -25, 17, 13, -13, 14, -31, -10, 25, -36, -5, 0, 3, -2, -51, -58, 24; D=-18;
/I: I=-18; DM=-57;
/M: SY='G'; M= -30, -66, -30, -10, -75, 90, -53, -61, -28, -72, -62, -16, -60, -23, -23, -14, -41, -41, -71, -69; D=-18;
/I: I=-18; MI=0; MD=-57; IM=0; DM=-57;
/M: SY='P'; M= 22, -14, -53, -48, 8, -22, -53, -61, -45, -60, -58, -41, 108, -48, -59, -29, -32, -54, -58, 10;
/M: SY='Q'; M= -35, -70, -39, 2, -59, -56, 72, -66, 17, -42, -27, -23, -53, 76, 54, 13, -39, -61, -56, -6;
/M: SY='L'; M= -48, -50, -79, -71, -25, -82, -70, 24, -65, 76, -3, -77, -71, -60, -62, -64, -45, 13, -55, -44;
/M: SY='Y'; M= -56, -61, -77, -65, 75, -74, -20, -26, -63, -15, -36, -65, -74, -57, -58, -57, -55, -43, 39, 108;
/M: SY='Q'; M= -33, -4, -14, 36, -52, -59, 35, -51, 28, -24, 53, -35, -52, 78, -2, -24, -30, -50, -53, 8;
/I: I=-25; MI=-81; MD=-81; IM=-81;
/M: SY='T'; M= -26, 42, -51, -50, -16, -56, -56, 4, -47, -9, -2, -13, -54, -46, -52, 26, 73, 25, -63, -47; D=-25;
/I: I=-25; DM=-81;
/M: SY='D'; M= -49, 27, 93, 50, -76, -52, -40, -67, -33, -72, -63, -1, -50, 1, -47, -33, -27, -43, -77, -68;
/M: SY='P'; M= -44, -68, -50, -46, -80, -61, -60, -72, -42, -71, -69, -58, 127, -47, -61, -43, -46, -64, -73, -71;
/M: SY='S'; M= 32, -41, -36, -34, -63, -23, -44, -60, -34, -63, -50, -7, -44, -33, -43, 92, -13, -49, -72, -54;
/M:
/M: SY='T'; M= 9, -49, -18, -25, -24, -25, 6, 8, -40, -24, -27, 45, -54, 4, -46, 16, 50, -8, -56, 25;
/M: SY='Y'; M= -48, -18, -67, -60, 58, -67, -27, -19, -58, -7, -36, -24, -3, -54, -57, 8, -45, -5, -18, 96;
/M: SY='Y'; M= -17, -12, -60, -56, 54, -17, 5, 7, -52, -12, 5, -6, -64, -30, -27, 5, 0, 0, 55, 59;
/M: SY='E'; M= 17, -63, 12, 54, -73, 51, -43, -70, -22, -69, -57, -17, 6, 4, 1, 11, -31, -61, -70, -62;
/M: SY='W'; M= -56, 38, -77, -64, 28, -70, 20, -46, -62, -32, 7, -63, -71, -50, -59, -58, -55, -30, 125, 93;
/M: SY='K'; M= -44, -71, -17, -17, 11, -42, 22, -61, 83, -47, -47, 6, -49, 24, 7, -21, -41, -50, 8, 2;
/I: I=-25; MI=-81; MD=-81; IM=-81;
/M: SY='A'; M= 85, -17, -53, -45, -64, 33, -54, -52, -43, -54, -46, -47, -47, -43, -52, -9, -33, -37, -70, -56; D=-25;
/I: I=-25; DM=-81;
/M: SY='T'; M= 10, 38, -46, -44, -22, -52, -49, -13, 7, -35, -5, 26, -53, -14, -28, -15, 67, 17, 14, -47;
/M: SY='A'; M= 77, 25, -49, -42, -63, -17, -51, -51, -40, -54, -45, -41, -45, -39, -49, 48, -4, -37, -70, -54;
/M: SY='I'; M= 0, -47, -67, -64, -36, -68, -68, 77, -59, -3, 32, -64, -64, -58, -63, -33, 20, 27, -65, -47;
/M:
/M: SY='K'; M= 28, -36, -43, -29, -63, -9, -43, -38, 46, -31, -12, -10, 0, 2, 32, 42, -25, -20, -69, -54;
/I: I=-25; MI=0; MD=-81; IM=0; DM=-81;
/M: SY='G'; M= -2, -64, -14, -30, -69, 56, 9, -71, 32, -58, -56, 48, -55, -31, 32, 0, -40, -64, -16, -57;
/M: SY='S'; M= 5, -56, -14, 0, -41, -18, 2, -61, 11, -60, -31, -17, -49, 34, 48, 58, -6, -41, -63, -13;
/M: SY='Q'; M= -28, -65, -5, 25, -60, -9, -31, -30, 13, -29, -39, 14, 3, 84, -15, -9, 2, -19, -57, -6;
/M: SY='A'; M= 48, -48, 4, 26, -64, 6, -47, -39, -37, -43, -45, 5, 9, -21, -47, 28, 20, -2, -71, -56;
/M: SY='A'; M= 77, -38, -58, -48, -55, -21, -37, 1, -46, -35, -24, -53, -49, -45, -53, -8, -16, 31, -70, -51;
/M: SY='K'; M= -41, -3, -27, -8, -60, -50, -38, -11, 50, -34, 30, -2, -53, 48, 49, -34, 22, -8, -64, -52;
/M: SY='T'; M= 12, -50, -1, 46, -66, -30, -41, -55, -17, -59, -47, 21, -46, -5, -39, 36, 64, -42, -70, -56;
/M: SY='Y'; M= -39, -60, -49, 31, 67, -66, -11, -5, -49, -15, 28, -6, -65, -41, -53, -24, -30, -8, 14, 70;
/M: SY='L'; M= -51, -52, -79, -71, 34, -81, -65, 20, -65, 72, 29, -76, -72, -60, -62, -64, -47, -17, -47, -32;
/M: SY='E'; M= -42, -80, -10, 99, -74, -59, -22, -70, 13, -58, -55, -33, -46, 29, -11, -25, -42, -54, -68, -58;
/M: SY='K'; M= -34, -74, 2, 32, -73, -53, -35, -68, 82, -65, -29, 5, -46, 27, 32, -20, -39, -62, -70, -57;
/M: SY='H'; M= -38, -68, 5, 33, -58, -41, 54, -38, 32, 3, -41, 48, -54, 13, 29, -30, -24, -41, -66, -46;
/I: I=-17; MD=-53;
/M: SY='Y'; M= -43, -63, -79, -65, 43, -77, -27, -23, -63, -9, 18, -68, -76, -17, -60, -59, -41, -15, 32, 100; D=-17;
/I: I=-17; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='K'; M= -25, -68, 12, 20, -11, -37, 27, -35, 33, -22, 0, 13, -4, -9, 16, 6, -5, -55, -68, -49; D=-17;
/I: I=-17; DM=-53;
/M: SY='E'; M= -17, -64, 36, 55, -7, -31, -42, -25, 11, -46, -52, -3, 16, -21, -18, 32, -4, -54, -68, -52; D=-17;
/I: I=-17; DM=-53;
/M: SY='D'; M= -21, -68, 60, 34, 30, 7, -1, -27, -20, -57, -53, 0, -5, -24, -49, -1, -18, -37, -59, -6; D=-17;
/I: I=-17; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='M'; M= -13, 27, -68, -23, -41, -44, -62, -5, -58, 37, 77, -63, -22, -50, -61, 5, -20, -19, -62, -31; D=-17;
/I: I=-17; DM=-53;
/M: SY='T'; M= -24, -50, 22, 14, -67, -19, -42, -53, -15, -61, -49, 32, -34, -31, -27, 50, 67, -47, -72, -57;
/M: SY='L'; M= -19, 30, -30, 6, -5, -45, -53, 3, -14, 41, 16, -56, 0, -11, 3, -27, -23, 9, 14, -8;
/M: SY='E'; M= -12, -33, 57, 62, -74, -43, -24, -69, 29, -68, -57, 12, -48, 12, 20, -19, -9, -63, -72, -60;
/M: SY='E'; M= -23, -75, 55, 81, -74, -25, -35, -70, -1, -57, -56, -26, -47, 37, -21, -11, -32, -65, -70, -61;
/M: SY='A'; M= 64, 15, -56, -50, -53, 17, -57, -21, -47, 13, -33, -48, -51, -46, -54, -10, 29, -13, -66, -53;
/M: SY='I'; M= -23, -48, -64, -13, -37, -72, -68, 68, -23, 7, 10, -66, -65, -38, -58, -39, -26, 52, -66, -47;
/M: SY='K'; M= -13, -65, -1, 33, -59, -41, 43, -27, 57, -11, 14, -16, -50, 28, 6, -35, -8, -19, -65, -47;
/M: SY='L'; M= -31, -55, -21, 19, -6, -66, 48, 6, -31, 50, 13, -47, -60, -23, -48, -14, 22, -20, -56, -38;
/M: SY='A'; M= 78, -40, -55, -47, -60, 27, -56, -23, -45, -47, -41, -49, -49, -45, -54, -8, -16, 13, -70, -55;
/M: SY='I'; M= 9, -48, -72, -66, -32, -49, -69, 57, -61, 50, 7, -70, -66, -59, -63, -36, -40, 24, -61, -46;
/M: SY='K'; M= -10, -17, -24, 11, -46, -54, -39, -33, 55, -3, -20, -17, -51, 2, 53, 11, 3, -41, -65, -29;
/M: SY='A'; M= 65, 13, -57, -50, -34, -42, -10, 34, -47, -35, -32, -50, -52, -46, -54, -7, 30, 10, -67, -48;
/M: SY='L'; M= -49, -50, -79, -71, -25, -82, -69, 39, -65, 73, 25, -77, -71, -60, -62, -64, -45, -6, -55, -44;
/M: SY='Y'; M= 2, -57, -49, -36, -24, -25, -3, -26, 36, 0, 14, -9, -54, 24, 24, 23, -20, -26, -8, 48;
/M: SY='E'; M= 7, -59, 5, 52, -65, -25, -39, -31, 34, -42, -7, -32, -47, 39, -25, 36, 0, -25, -67, -55;
/I: I=-22; MI=0; MD=-71; IM=0; DM=-71;
/M: SY='T'; M= 28, -40, -54, -50, -53, -14, -59, -15, -47, -29, -31, -44, -52, -47, -53, 20, 59, 53, -69, -51;
/M: SY='M'; M= -28, -52, -42, -54, 8, -66, 49, -5, -50, 43, 60, -15, -64, -44, -18, -24, 15, 16, -54, -25;
/M: SY='E'; M= -23, -72, 56, 62, -76, 3, -39, -72, 0, -72, -58, -27, 21, 39, -33, 12, -40, -67, -72, -63;
/I: I=-18; MI=0; MD=-59; IM=0; DM=-59;
/M: SY='S'; M=-110,-134,-124,-122,-145, -59,-128,-125, -74,-137,-128, -69,-135,-117, -51, -24, -70, -62,-154,-138; D=-18;
/I: I=-18; DM=-59;
/M: SY='E'; M= -22, -76, 12, 42, -82, 20, -37, -19, -34, -73, -65, -16, -66, -41, -35, -13, 11, -51, -86, -74; D=-18;
/I: I=-18; DM=-59;
/M: SY='E'; M= -26, -76, 42, 57, -79, -9, -43, -62, 43, -74, -62, -19, -52, 1, -23, 6, -29, -68, -78, -66; D=-18;
/I: I=-18; MI=0; MD=-59; IM=0; DM=-59;
/M: SY='L'; M= -15, -51, -60, -24, 34, -65, -57, 3, -36, 52, 26, -14, -15, -49, -55, 1, 3, 3, -51, -33;
/M: SY='T'; M= -15, -56, 17, -19, -68, 8, -39, -59, 45, -52, -50, 45, -49, -28, 3, 22, 49, -45, -72, -58;
/M: SY='P'; M= 30, -53, 24, 7, -61, -4, -2, -33, -5, -38, -28, -13, 52, -10, -44, 36, -10, -21, -68, -24;
/M: SY='K'; M= -16, -63, 29, 38, -53, -15, -26, -62, 57, -64, -29, 29, -47, 1, -23, 15, 19, -45, -71, -57;
/I: I=-24; MI=0; MD=-77; IM=0; DM=-77;
/M: SY='N'; M= -27, -64, 13, 38, -71, 6, -30, -68, 15, -54, -55, 80, -52, 12, -7, -4, 4, -63, -72, -59;
/M: SY='I'; M= -34, 2, -73, -68, -20, -76, -72, 57, -63, 34, 6, -70, -20, -61, -65, -54, -4, 50, -62, -45;
/M: SY='E'; M= -39, -72, 13, 95, -74, -34, -34, -70, -21, -68, -56, -30, -46, 17, -34, 13, 3, -62, -69, -59;
/M: SY='I'; M= -42, -47, -74, -49, -6, -77, -70, 57, -62, 29, 48, -72, -69, -59, -64, -58, -38, 54, -60, -42;
/M: SY='A'; M= 63, -29, -51, -48, -64, 57, -54, -50, -45, -45, -27, -41, -51, -45, -54, 21, -14, -13, -70, -58;
/I: I=-23; MI=0; MD=-74; IM=0; DM=-74;
/M: SY='W'; M= -42, -24, -69, -61, 1, -52, -57, 41, -25, -18, -27, -62, -65, -54, -12, -27, 14, 50, 82, 22; D=-23;
/I: I=-23; DM=-74;
/M: SY='V'; M= -5, 14, -73, -65, -27, -70, -69, 45, -34, 14, 31, -69, -65, -57, -61, -51, -35, 65, -62, -26;
/I: I=-23; E1=0; IE=-255; DE=-74;
|
| Post-processing | |
| COMPETES_SEQ_WITH: PS51476; | |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:PSA1A_ARATH (P34066), PSA1B_ARATH (O23712), PSA1_BOVIN (Q3T0X5), PSA1_CAEEL (O44156), PSA1_CHICK (O42265), PSA1_DICDI (Q27562), PSA1_DROME (P12881), PSA1_HALMA (Q5V2X8), PSA1_HALVD (Q9V2V6), PSA1_HUMAN (P25786), PSA1_MACFA (Q4R3H2), PSA1_MOUSE (Q9R1P4), PSA1_ORYSJ (P52428), PSA1_PONAB (Q5REN2), PSA1_RAT (P18420), PSA1_RHOER (Q53080), PSA1_SCHPO (O94517), PSA1_TRYBB (Q9GU37), PSA1_TRYBR (O96788), PSA1_TRYCR (P92188), PSA1_YEAST (P21243), PSA2A_ARATH (O23708), PSA2B_ARATH (Q8L4A7), PSA2_BOVIN (Q3T0Y5), PSA2_CAEEL (Q27488), PSA2_CARAU (O73672), PSA2_DICDI (Q54DM7), PSA2_DROME (P40301), PSA2_HALMA (Q5V1D4), PSA2_HALVD (Q9V2V5), PSA2_HUMAN (P25787), PSA2_MOUSE (P49722), PSA2_NEUCR (Q8X077), PSA2_ORYSI (A2YVR7), PSA2_ORYSJ (Q10KF0), PSA2_RAT (P17220), PSA2_RHOER (Q53084), PSA2_SCHPO (O94579), PSA2_TRYBB (Q9U793), PSA2_XENLA (P24495), PSA2_YEAST (P23639), PSA3_ACACA (P90513), PSA3_ARATH (O23715), PSA3_BOVIN (Q58DU5), PSA3_CAEEL (Q09583), PSA3_DICDI (Q27563), PSA3_DROME (Q9V5C6), PSA3_ENCCU (Q8SRU7), PSA3_HUMAN (P25788), PSA3_MOUSE (O70435), PSA3_ORYSJ (Q9LSU0), PSA3_RAT (P18422), PSA3_SCHPO (Q09682), PSA3_SPIOL (O24362), PSA3_YEAST (P23638), PSA4A_ORYSI (A2Y9X7), PSA4A_ORYSJ (P0C1G8), PSA4B_ORYSI (P0C8Y9), PSA4B_ORYSJ (Q5VRG3), PSA4L_DROME (Q9VA12), PSA4_ARATH (O81148), PSA4_BOVIN (Q3ZCK9), PSA4_CAEEL (Q9N599), PSA4_DICDI (P34119), PSA4_DROME (P18053), PSA4_HUMAN (P25789), PSA4_MACFA (Q4R932), PSA4_MOUSE (Q9R1P0), PSA4_PETHY (O82530), PSA4_RAT (P21670), PSA4_SCHPO (Q10329), PSA4_SPIOL (P52427), PSA4_YEAST (P40303), PSA5A_ARATH (O81149), PSA5B_ARATH (Q42134), PSA5_BOVIN (Q5E987), PSA5_CAEEL (Q95008), PSA5_DICDI (Q55G04), PSA5_DROME (Q95083), PSA5_ENCCU (Q8SRU3), PSA5_ENTHI (Q94561), PSA5_HUMAN (P28066), PSA5_MOUSE (Q9Z2U1), PSA5_ORYSJ (Q9LSU1), PSA5_RAT (P34064), PSA5_SCHPO (Q9UT97), PSA5_SOYBN (Q9M4T8), PSA5_TRYBB (Q9XZG5), PSA5_YEAST (P32379), PSA6A_ARATH (O81146), PSA6B_ARATH (O81147), PSA6_BOVIN (Q2YDE4), PSA6_CAEEL (O17586), PSA6_DICDI (Q54XM7), PSA6_DROME (Q9XZJ4), PSA6_ENCCU (Q8SQS5), PSA6_HUMAN (P60900), PSA6_MOUSE (Q9QUM9), PSA6_ORYSJ (Q9LSU3), PSA6_RAT (P60901), PSA6_SCHPO (O14250), PSA6_SOYBN (O48551), PSA6_TOBAC (Q9XG77), PSA6_YEAST (P40302), PSA71_DROME (P22769), PSA71_DROVI (O16811), PSA72_DROME (Q24178), PSA73_DROME (Q27575), PSA73_DROVI (O16812), PSA7A_ARATH (P30186), PSA7A_ORYSI (A2YXU2), PSA7A_ORYSJ (Q6YT00), PSA7A_XENLA (Q9PVY6), PSA7B_ARATH (O24616), PSA7B_ORYSI (A2Z3I9), PSA7B_ORYSJ (Q0J006), PSA7B_XENLA (Q9PVQ1), PSA7L_HUMAN (Q8TAA3), PSA7L_MACFA (Q4R7D9), PSA7L_MOUSE (Q9CWH6), PSA7_BOVIN (Q3ZBG0), PSA7_CAEEL (Q95005), PSA7_CARAU (Q9PTW9), PSA7_CHICK (O13268), PSA7_CICAR (Q9SXU1), PSA7_DICDI (P34120), PSA7_ENCCU (Q8SQP9), PSA7_HUMAN (O14818), PSA7_MOUSE (Q9Z2U0), PSA7_PONAB (Q5RDH8), PSA7_RAT (P48004), PSA7_SCHPO (O59770), PSA7_SOLLC (O24030), PSA7_TRYBB (Q9NDA2), PSA7_YEAST (P21242), PSA_ACIC1 (A0LU51), PSA_AERPE (Q9YC01), PSA_ARCFU (O29760), PSA_FRAAA (Q0RLT6), PSA_GEOOG (D2S6E3), PSA_HALS3 (B0R2T2), PSA_HALSA (P57697), PSA_HALWD (Q18K08), PSA_KINRD (A6W971), PSA_KRIFD (D2Q4H5), PSA_METAC (Q8TPX5), PSA_METB6 (A7I9C7), PSA_METBF (Q469M6), PSA_METJA (Q60177), PSA_METKA (Q8TYB7), PSA_METM5 (A4FZT6), PSA_METM6 (A9A846), PSA_METM7 (A6VIP0), PSA_METMA (Q8PTU1), PSA_METMJ (A3CW55), PSA_METMP (Q6M0L9), PSA_METPE (B8GEZ3), PSA_METS3 (A5UJS2), PSA_METS5 (A4YCU9), PSA_METTE (Q59565), PSA_METTH (O26782), PSA_METVS (A6URN9), PSA_MYCA1 (A0QFB6), PSA_MYCA9 (B1MAI3), PSA_MYCBO (Q7TZ14), PSA_MYCBP (A1KKF2), PSA_MYCBT (C1AQ25), PSA_MYCGI (A4TB55), PSA_MYCLB (B8ZRF4), PSA_MYCLE (Q9S375), PSA_MYCMM (B2HFV5), PSA_MYCPA (Q73YW9), PSA_MYCS2 (A0QZ46), PSA_MYCTA (A5U4D5), PSA_MYCTF (A5WP83), PSA_MYCTK (C6DPV2), PSA_MYCTU (O33244), PSA_MYCUA (A0PQT2), PSA_MYCVP (A1TAP3), PSA_NATPD (Q3IPJ1), PSA_NOCSJ (A1SK14), PSA_PICTO (Q6L0W3), PSA_PYRAB (Q9V122), PSA_PYRAE (Q8ZVM1), PSA_PYRFU (Q8U0L6), PSA_PYRHO (O59219), PSA_PYRKO (Q5JIU9), PSA_RHOE4 (C0ZZU6), PSA_RHOOB (C1ASP6), PSA_RHOSR (Q0SIG0), PSA_SACEN (A4FBY2), PSA_SACVD (C7MWV6), PSA_STRAW (Q828I7), PSA_STRCO (Q7AKQ6), PSA_STRGG (B1W307), PSA_STRRD (D2ATV0), PSA_STRSW (C9Z4D1), PSA_SULAC (Q4JB24), PSA_SULIA (C3N5R0), PSA_SULIK (C4KHD9), PSA_SULIL (C3MQ43), PSA_SULIM (C3MVG1), PSA_SULIN (C3NHC6), PSA_SULIY (C3NEC6), PSA_SULSO (Q9UXC6), PSA_SULTO (Q975G5), PSA_THEAC (P25156), PSA_THEGJ (C5A2C2), PSA_THEK1 (O24733), PSA_THEON (B6YSH9), PSA_THESM (C6A459), PSA_THEVO (Q97BZ8)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): PSA_ACIFD (C7LYP8), PSA_ACTMD (C6WID9), PSA_ARTAT (A1R6Q8), PSA_ARTCA (B8H8L7), PSA_ARTS2 (A0JWY7), PSA_CATAD (C7PVV3), PSA_FRASC (Q2J9Q4), PSA_FRASN (A8LH53), PSA_GORB4 (D0LDT2), PSA_JONDD (C7R404), PSA_MYCSJ (A3Q192), PSA_MYCSK (A1UHS6), PSA_MYCSS (Q1B798), PSA_NAKMY (C8XAQ3), PSA_NOCFA (Q5YUX3), PSA_RENSM (A9WSI0), PSA_SALAI (A8M2A4), PSA_SALTO (A4X745), PSA_SANKS (D1BHT8), PSA_STANL (D3Q556), PSA_THECD (D1A2T0), PSA_THEFY (Q47NZ5), PSA_XYLCX (D1BS27)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
|
| PDB [Detailed view] |
1FNT; 1G0U; 1G65; 1IRU; 1J2P; 1J2Q; 1JD2; 1PMA; 1Q5Q; 1Q5R; 1RYP; 1VSY; 1YA7; 1YAR; 1YAU; 1Z7Q; 2F16; 2FAK; 2GPL; 2H6J; 2KU1; 2KU2; 2Z5C; 2ZCY; 3BDM; 3C91; 3C92; 3D29; 3DY3; 3DY4; 3E47; 3GPJ; 3GPT; 3GPW; 3H4P; 3HYE; 3IPM; 3JRM; 3JSE; 3JTL; 3L5Q; 3MG0; 3MG4; 3MG6; 3MG7; 3MG8; 3NZJ; 3NZW; 3NZX; 3OEU; 3OEV; 3OKJ; 3SDI; 3SDK; 3SHJ; 3TDD; 3UN4; 3UN8; 3UNB; 3UNE; 3UNF; 3UNH; 4B4T; 4FZC; 4FZG; 4G4S; 4GK7; 4INR; 4INT; 4INU; |
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