Entry: PS51549

Forthcoming changes to the profile format
General information about the entry

Entry name [info] DM13
Accession [info] PS51549
Entry type [info] MATRIX
Date [info] OCT-2011 (CREATED); OCT-2013 (DATA UPDATE); OCT-2011 (INFO UPDATE).
PROSITE Doc. [info] PDOC51549
Associated ProRule [info] PRU00882

Name and characterization of the entry

Description [info] DM13 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=107;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=102;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4172571; R2=0.0087599; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=6507.97805; R2=29.25247; TEXT='HScore';
/CUT_OFF: LEVEL=0; SCORE=809; N_SCORE=9.5; H_SCORE=26809; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=467; N_SCORE=6.5; H_SCORE=20140; MODE=1; TEXT='?';
/DEFAULT: M0=-27; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-255; BD=-255;
/M: SY='G'; M=   7, -74, -64, -68, -76,  83, -16, -23, -40, -57, -66,  -7, -15,   4, -40, -28, -37,  -1, -76, -72;
/M: SY='T'; M= -22, -71,  19,   3, -48,  13, -20, -21,   5, -68, -63,  -8, -20,  22,  -7,  37,  44,   7, -82, -66;
/M: SY='F'; M= -29, -71, -81, -47, 100, -80, -66,   3, -45,   3, -47, -74, -82, -77, -72, -22, -62,   7, -48,  36;
/I:         I=-18; MD=-45;
/M: SY='K'; M= -25, -89,  -6,   6, -84, -31, -21,  -4,  17, -40,  -5, -39, -25, -12,   4,  -4, -12,  -9, -94, -79; D=-18;
/I:         I=-18; MI=0; MD=-45; IM=0; DM=-45;
/M: SY='G'; M=   8, -91, -80, -12, -92,  43, -82, -91, -80, -30, -18, -74, -87,  18, -84,  13, -77, -86, -93, -34; D=-18;
/I:         I=-18; DM=-45;
/M: SY='D'; M= -37, -93,  33, -11, -44, -35, -24, -82,   4, -16,  -4, -38,  17, -37,  -4, -13, -42, -48, -95, -25; D=-18;
/I:         I=-18; DM=-45;
/M: SY='F'; M= -74, -83,  -4, -79,  58, -10, -77, -27, -47,  24, -61, -27, -38, -80, -45,  -1,   7, -42, -76, -57; D=-18;
/I:         I=-18; DM=-45;
/M: SY='S'; M= -12, -69, -32, -61, -31,  29, -64, -28,  -3, -64, -24,  15, -69, -29,  15,  50,  20,  33, -80, -65;
/M: SY='M'; M=  -7, -20,  36,   6,  -6,  -1, -59, -44,  -2, -16,  40,  12, -30,  21, -23,  30,  27, -62, -79, -62;
/M: SY='F'; M=  21, -71, -20, -23,  28,   9, -13, -11,  -5,   3, -55,   7,  -7, -14,  -9,  22, -21,  -2, -70,   1;
/M: SY='H'; M=  11, -74,   5,  29,   4,  -3,  60, -27,  -3, -14, -10,   5, -68,  36, -14, -40,  -2, -34, -73,  11;
/M: SY='H'; M= -20, -77, -14, -21, -67,   6, 121, -78,  -6, -70, -58,   9, -69, -28,  -3, -34,  -1, -44, -85,  15;
/M: SY='W'; M= -15, -76,   6,   1, -70,   8, -22,  -7,  -8, -49, -60, -10,  10,  53,  12,  -3,   8,  19,  63, -62;
/M: SY='T'; M=  -2, -68, -70, -69, -60,  10, -22,  26, -39,  -4, -50, -61, -70, -66, -42,   3,  55,  47,  34, -61;
/M: SY='S'; M=  -6, -69, -35,  11, -16, -28, -11, -38,  10, -71, -65, -24, -65,  11,  26,  72,  14, -29, -78, -63;
/M: SY='G'; M= -33, -76, -13, -49, -82,  99,  -8, -89, -68, -85, -75, -49, -68, -65, -75, -19, -66, -83, -75, -76;
/M: SY='T'; M= -41, -73,   8,  16, -32, -50, -59, -28,  22, -70, -21, -15,  29,  24,  34,  25,  50, -44, -80, -65;
/M: SY='V'; M=  33, -68, -79, -74,  10, -43, -21,  45, -73,   2, -43, -73, -76, -72, -75, -62, -55,  69, -76, -57;
/M: SY='Y'; M= -34, -72, -40,  27,  -7, -44, -10, -38,  -6, -33, -58, -34, -68,   5,  19,  28,  43,   7, -66,  56;
/M: SY='I'; M=   1, -71, -83, -78, -23, -82, -79,  71, -76,  32,  -7, -76, -77, -73, -77, -46, -56,  52, -76, -57;
/M: SY='V'; M= -27, -71, -35, -11, -21, -34, -24,  34,   0,  21, -45, -67, -73, -64, -37, -21,  12,  54, -73,  19;
/M: SY='D'; M= -31, -75,  80, -21, -43, -27, -53, -78,   2, -78, -72,  61, -68,  16,  13,   0,   2, -57, -89, -68;
/M: SY='D'; M=  -5,  -5,  64,  15, -74,   1, -56, -69,  -2, -34, -22,  51, -67, -26, -34,  11,   7, -18, -85, -31;
/M: SY='C'; M=   6,  67, -36,  18, -74,  19, -59, -77,  35, -75, -67,  35,   6, -12,  18, -11,  -4, -71, -78,  -7;
/I:         I=-21; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='T'; M= -16, -68, -65, -26, -11, -71,  -9,   8, -26,  -7, -55, -57, -68, -62, -30,  29,  74,  14, -79,   0; D=-21;
/I:         I=-21; DM=-53;
/M: SY='L'; M= -14, -71, -77, -13,  45, -81, -69,  28, -51,  61, -38, -75, -78, -25, -44, -69, -21,   7, -66, -15;
/M: SY='R'; M= -37, -75, -67,   8,  30, -78,   3,  -3,   9,  36,   7, -65, -74,  26,  44, -64, -22,  -4, -67,   5;
/M: SY='I'; M= -62, -72, -28, -20,  30, -25, -73,  58, -13,  39, -41, -71, -76, -69, -71, -17, -35,  31, -71, -52;
/M: SY='E'; M= -24, -73,  22,  41,   1,   6,  -7, -42,  -9, -52, -65,  -6,  28,  -1, -19,  23,  38, -37, -79, -64;
/M: SY='N'; M= -17, -74,  52,  15, -81,  34, -53, -81,  -5, -81, -72,  74, -68,   2,  14, -13, -55, -78, -85, -71;
/M: SY='F'; M= -55, -71, -84, -78, 110, -81, -68, -25, -42,   4, -48, -74, -83, -34, -73, -46, -22,  -7, -47,  -7;
/M: SY='S'; M=  11, -68,  22,  -1,   0, -60,  -6, -67,   9, -69, -65,  11, -66, -52,   7,  57,  38, -16, -79, -24;
/I:         I=-26; MD=-65;
/M: SY='Y'; M= -66, -74, -42, -73,  55, -78, -58, -29, -44, -10,  20, -68, -79, -41, -69,  -2,  37,   4, -52,  82; D=-26;
/I:         I=-26; MD=-65;
/M: SY='D'; M= -50, -77,  75, -31, -79, -27, -60, -45,   2, -16, -26,   9, -70,  14, -42,  36,  17, -71, -90, -70; D=-26;
/I:         I=-26; MD=-65;
/M: SY='G'; M= -20,-100, -31, -57,-104,  57, -12,-105, -87, -71, -93, -41,  -8,  -7, -94, -74, -26,-100,-101, -96; D=-26;
/I:         I=-26; MI=-65; IM=-65; DM=-65;
/M: SY='N'; M= -17, -74,  25,  13, -78,  25,   2, -74,   9, -38, -67,  41,  28,  25, -57,  35, -11, -50, -82, -69;
/M: SY='G'; M=  26, -73,  -7, -65, -79,  81, -18, -29, -39, -77, -69,  -2, -68,   0, -69,   6, -60, -47, -77, -73;
/I:         I=-28; MI=0; MD=-71; IM=0; DM=-71;
/M: SY='P'; M= -63, -87, -27, -54, -82, -68, -68, -45, -23, -56, -67, -68, 117,   1, -70, -10, -29, -25, -79, -78;
/M: SY='D'; M=   0, -76, 104,  -9, -84, -44, -14, -80, -55, -80, -77,  17, -67, -22, -62,  -2, -25, -50, -96, -69;
/M: SY='V'; M=  34, -68, -76, -71, -51, -16, -70, -11, -71,  43, -13, -72,  -4, -68, -72, -60, -10,  50, -72,  23;
/M: SY='Y'; M= -68, -18, -66, -37,  47, -76,  48, -65,  33, -59, -18, -61, -76,   4,  47, -64, -65, -49,  40,  84;
/M: SY='F'; M= -66, -73, -87, -81,  81, -84, -76,  35, -77,  17,  -6, -79, -81, -79, -77, -73, -62,  45,  76, -36;
/M: SY='W'; M= -22, -82, -80, -74,  15, -50, -62, -15, -67, -13,  21, -17, -78, -66, -31, -68, -16, -24, 133,  83;
/M: SY='L'; M=   8, -17, -77, -72, -14,  -4, -70, -37, -71,  61, -40, -71, -77, -68, -35,   6, -18,  38, -75, -58;
/M: SY='G'; M=  29, -70,   8, -63, -71,  63,  21, -74, -63, -74, -67, -50, -67, -60, -68,  32,  32, -47, -75,  14;
/M: SY='K'; M= -12, -74,  21, -24, -74, -42, -11, -12,  54, -50, -63,  16,  32, -30,  24,   1,  31, -28, -80, -67;
/M: SY='G'; M=  -3, -73,  45,  11, -80,  51, -21, -78,   4, -78, -70,  22, -36,  13, -59,  24,   1, -46, -82, -70;
/M: SY='P'; M=  -1, -73,  18, -16,  11,  18,   6, -69,   1, -34, -64,  22,  42,  -8, -26,  24,  25, -38, -78, -63;
/M: SY='D'; M=   0, -72,  39,   6,  -6, -65, -60, -22,   6, -65, -62,  21,  -8,  11,  18,  25,  11,  22, -81, -63;
/M: SY='P'; M= -24, -80,  16,   0,   9, -50, -63,  -5, -38, -19, -13, -33,  87,  -1, -31, -27, -58,   4, -71,  18;
/M: SY='N'; M=  -1, -72,  27,  -7, -71, -21,  -8, -16,   5, -48, -64,  36,  31, -53,   2,  35,  34, -44, -80,  -8;
/M: SY='N'; M=  -3, -74,  36,   4, -74,  -2,   1, -17,  12, -31, -64,  45,  13,  30,   1,  21, -24, -67, -80, -26;
/M: SY='Y'; M= -27, -74,  34,  15,   9,  21, -59, -12,  -6, -12,   0,   0, -35,   4, -62,   6,   0, -12,  -4,  38;
/M: SY='G'; M= -21, -72, -14,   1, -70,  50, -21, -15, -11, -51, -63, -52, -67,  -3,   9,  31,  34,   0,  -5, -13;
/I:         I=-13; MI=0; MD=-33; IM=0; DM=-33;
/M: SY='I'; M= -66, -99, -33, -96,   7, -65, -97,  27, -59,   5, -69, -32, -10, -95, -40, -91, -28,  -3, -98, -79; D=-13;
/I:         I=-13; DM=-33;
/M: SY='R'; M= -13, -95, -48, -19, -20, -93, -82, -13,  15, -14, -73, -83,  -5, -74,  25, -52, -79, -10, -89,   3; D=-13;
/I:         I=-13; DM=-33;
/M: SY='V'; M= -47, -94,  -6, -29, -22, -38, -85,   4, -12, -14, -16, -44, -14, -34, -10, -83, -78,  23, -93, -10; D=-13;
/I:         I=-13; DM=-33;
/M: SY='P'; M= -51, -92,   7,  -1, -90, -29, -10, -47,   8, -88, -79, -21,  51,  11,  16,  15, -68, -45, -91, -36; D=-13;
/I:         I=-13; DM=-33;
/M: SY='D'; M= -50, -87,  53,   9, -86,  23,  -7, -86,  -2, -55, -80,  27, -78, -21, -70, -28,  -8, -45, -94, -16; D=-13;
/I:         I=-13; DM=-33;
/M: SY='E'; M= -17, -82,  10,  49,   9, -27, -63, -50,  -7, -78, -73,  20, -19,   9, -16,   5,  -4, -76, -80,   1; D=-13;
/I:         I=-13; DM=-33;
/M: SY='Y'; M=   1, -81, -68, -18, -17,  11,  18, -49, -40, -71,  -2,   8,   1,  11, -36,   2,  -3, -47,  -2,  65; D=-13;
/I:         I=-13; DM=-33;
/M: SY='G'; M= -14, -78, -12, -43,  21,  36, -75,   9, -35,   9, -57, -34, -15, -33, -38, -65, -17,  20, -76, -18; D=-13;
/I:         I=-13; DM=-33;
/M: SY='E'; M= -23, -75,  30,  32, -71,   2, -56, -32,  19, -47,  15,  21,   2,   1,  17,  27, -14, -34, -77,  -2;
/M: SY='L'; M= -26,  -4, -15,  -4,  -8, -58, -18,  40, -68,  44,  -9, -36, -40, -65, -33,  -4,   4,  23, -75, -18;
/M: SY='G'; M=  26,  12, -41,   5, -78,  62, -64, -40, -15, -73, -66,  17, -16,  28, -64,  -7, -13, -13, -78, -72;
/M: SY='P'; M=  -1, -80,   8,  12, -78, -67, -63, -39,  23, -57,  -2, -27,  89, -26,  19, -16, -28, -22, -79, -72;
/M: SY='L'; M= -28, -70, -78, -48, -18, -56, -67,  17, -73,  72,  33, -16, -50, -29, -72, -70, -25,   4, -71, -17;
/M: SY='K'; M= -21, -76,  -2,   2, -74,   5, -17, -35,  59, -18, -61,  -2, -12,  33,  36, -17,  -7, -29, -77, -65;
/I:         I=-20; MI=0; MD=-50; IM=0; DM=-50;
/M: SY='Y'; M= -22, -84, -37, -25,  -9,  10,  -4, -40,  -8, -35, -64, -13, -81,  -5, -38,  11, -66, -71, -57,  88; D=-20;
/I:         I=-20; DM=-50;
/M: SY='N'; M= -30, -73,  25, -40,  27,  -5,  -5, -16,  -6, -27, -62,  61, -31,   5,  -5,  11,  10, -15, -78, -31; D=-20;
/I:         I=-20; DM=-50;
/M: SY='N'; M= -39, -73,   7, -13,  19,  24,   5, -22,  25, -71, -66,  58, -69,   3, -10,  27,   9, -69, -78, -61; D=-20;
/I:         I=-20; DM=-50;
/M: SY='G'; M=   1, -76,  -8,  54, -39,  64, -62, -81,  27, -78, -70, -52, -64,  -2, -32, -34,  -8, -75, -76, -71;
/M: SY='N'; M= -33, -72,  61,   6, -35, -15, -54, -74,  -1, -46, -69,  63, -67, -51,  16,  10,  38, -70, -87, -67;
/M: SY='Q'; M= -62, -75, -72, -58,  46, -78, -63,  32, -34,  19,  18, -66, -75,  82, -31, -62, -33,  25, -67, -49;
/M: SY='T'; M= -58, -70, -35,   6, -18, -73, -64,  19, -34, -35,  -5,  23, -69, -35,  28, -23,  55,  44, -78,  -2;
/M: SY='Y'; M= -42, -74, -34, -74,  39, -81, -58,  23, -39,  38, -42, -74, -80, -68, -36, -69, -34,  24, -51,  84;
/M: SY='T'; M=  16, -72,  13,  21, -74, -66,  25, -44,  11, -53, -63,  -7,   1,  -6,  39,   5,  45, -16, -82, -65;
/M: SY='L'; M= -64, -71, -85, -79, -44, -87, -74,  56, -78,  72, -32, -81, -81, -73, -77, -75, -60,  26, -74, -55;
/I:         I=-26; MD=-65;
/M: SY='P'; M= -32, -89, -11, -20, -84, -70, -69, -73, -21, -29, -69, -36, 113, -27, -72, -35, -33, -77, -82, -81; D=-26;
/I:         I=-26; MI=0; MD=-65; IM=0; DM=-65;
/M: SY='D'; M=  20, -73,  33,  31, -78,  32, -59, -75,  10, -39, -35,  12,   8,  12, -16,  13,  -4, -70, -80, -70;
/M: SY='D'; M= -32, -73,  49,  -4, -32,  48, -59, -76,   4, -54, -70,  47, -11, -55, -37,  24,   1, -41, -82, -69;
/M: SY='L'; M= -14, -71, -31, -67,   1, -57,  10,  30,  -4,  37, -43, -67, -17,  -5, -38, -38,  16,  34,  -1,   2;
/M: SY='D'; M=  -9, -70,  62, -31, -74, -41, -58, -43,   8, -45, -11,  41, -66, -53,  -2,  21,  57, -42, -87, -67;
/M: SY='W'; M= -46, -75, -44, -71,   6, -79, -75,  35, -33,  36, -13, -75,  20, -22, -36, -46,  -5,  34,  94, -50;
/M: SY='D'; M=   9, -72,  54,  21,   7, -50, -14, -45,   7, -71, -67,  17,  -6, -26, -20,  31,  21, -67, -76,   9;
/M: SY='D'; M= -20, -76,  82,  21, -79,   0,  10, -76,  19, -39, -27,   9, -66, -21,  -5, -11,  -6, -53, -88, -67;
/M: SY='Y'; M= -35, -76, -77, -74,  40, -81, -21,  50, -70,  -6, -10, -73, -32,  -3, -70, -68, -61,  26,  -6,  87;
/M: SY='D'; M= -11, -75,  46, -25, -30,   6, -57, -76,  44, -77, -68,  41,  12,  13,  24, -14,  15, -73, -81, -67;
/M: SY='W'; M= -12, -74, -66, -14,  -4, -50,  35, -60, -37, -44, -61,  -4, -71, -59, -65,  46,  22,  13, 116,  27;
/M: SY='V'; M= -28, -69, -84, -79,  54, -84, -77,  40, -77,  35, -39, -78, -80, -77, -77, -70, -58,  64, -68, -47;
/M: SY='S'; M=  38, -66, -66, -63, -63, -28, -65, -19, -63,   0, -20, -58, -69,  -4, -66,  66, -12,  33, -77, -10;
/M: SY='I'; M= -37, -72, -83, -80, -19, -31, -83,  76, -76,  -5,  -5, -76, -76, -75, -79, -69, -56,  67, -78, -58;
/M: SY='W'; M= -74, -13, -90, -78,  46, -75,   4, -66, -71, -62, -65, -45, -81, -71, -73, -77, -79, -76, 160,  56;
/M: SY='C'; M= -60, 140,  28, -68, -74, -39, -72, -79, -69, -72, -70,  -2, -84, -73, -42,   3, -34, -68, -98, -78;
/M: SY='E'; M= -63, -79,  25,  52, -11, -74, -56, -18,  32, -21,  -8, -56,   5,  27,  36, -39, -26, -18, -72,  10;
/M: SY='Q'; M=  23, -75,   5,  12, -75, -66, -58, -12,  42, -45, -22,  -3,   6,  46,  35, -30,   1, -26, -78, -66;
/M: SY='F'; M=   9, -70, -71, -19,  95, -72, -18, -54, -67, -50, -54, -14, -76, -70, -30, -16,  26, -32, -50,  45;
/M: SY='N'; M=  12, -70,   3,   0, -76,  15, -16, -74,  11, -34, -66,  58, -67,  14,   5,  43,  -3, -69, -82, -68;
/M: SY='V'; M=  14, -69, -64,  21, -63, -71,  32,  -6, -16, -34, -15, -27, -71, -21,  -9,  14, -32,  68, -83, -62;
/M: SY='N'; M= -31, -69,  45, -57,  25, -35, -59, -24, -60,   8, -58,  55, -17, -59, -66,  34,  34, -22, -78, -30;
/M: SY='F'; M= -73, -72, -85, -81, 108, -83,  -8,   5, -77,   7,  32, -76, -83, -81, -74, -74, -66, -49, -46,  16;
/M: SY='G'; M=  19, -73, -65, -73, -80,  94, -71, -50, -68, -80, -71, -52, -68, -66, -75, -15, -38, -41, -75, -76;
/M: SY='H'; M=  11, -73,  26,   6,  -1, -43,  85, -25, -59, -45, -59, -29, -37, -33, -61,  39,  -3, -16,   3,  30;
/M: SY='A'; M=  65, -65, -75, -69, -31,  -7, -76,  13, -68, -35, -50, -68, -72, -67, -41, -53, -53,  63, -79, -65;
/M: SY='P'; M= -18, -76, -11,  27, -19, -25, -60,   1,  12,  -9, -57, -60,  45,  12,  15,   7, -11,  -4, -70,  27;
/M: SY='L'; M= -68, -73, -34, -76,  50, -84, -68,  49, -74,  60,  -3, -76, -32, -72, -43, -73, -28, -38, -61,  25;
/M: SY='P'; M= -40, -77,  18,  -2, -45, -25, -58, -73,  12, -75,  -2,  28,  72,  12,  13,  23,  10, -72, -78, -11;
/I:         E1=0; IE=-255; DE=-255;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 4 in 2 different sequences
Number of true positive hits 4 in 2 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Feature key [info] DOMAIN
Feature description [info] DM13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
2 sequences

SKEL1_DROME (Q9VGY6), SKEL2_DROME (Q9GPJ1)

			
		

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