PROSITE entry PS60008
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General information about the entry
Entry name [info] | CYCLOTIDE_BRACELET |
Accession [info] | PS60008 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-2004 CREATED;
01-OCT-2005 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC51052 |
Name and characterization of the entry
Description [info] | Cyclotides bracelet subfamily signature. |
Pattern [info] |
C-x(0,1)-[ES]-S-C-[AV]-[MFYW]-I-[PS]-x(0,1)-C. |
Numerical results [info]
Total number of hits | 123 in 122 different sequences |
Number of true positive hits | 123 in 122 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 8 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 93.89 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 2 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 5 |
Site [info] | disulfide at position 11 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
122 sequences
CIRA_CHACT (C0HKH8), CIRA_CHAPA (P56871), CIRB_CHAPA (P56879), CIRC_CHAPA (P84641), CIRD_CHAPA (P84642), CIRE_CHAPA (P84643), CIRF_CHAPA (P84644), CYC10_CLITE (C0HKG2), CYC11_CHACT (C0HKH6), CYC11_CLITE (C0HKG3), CYC12_CLITE (G1CWH8), CYC13_CHACT (I0B6G2), CYC13_CLITE (C0HJS0), CYC14_CLITE (C0HJS1), CYC17_CLITE (P86849), CYC1_CLITE (G1CWH0), CYC2_CHACT (I0B6F2), CYC3_CHACT (C0HKH3), CYC4_CLITE (G1CWH3), CYC5_CHACT (C0HKH2), CYC5_CLITE (G1CWH4), CYC6_CHACT (C0HKH1), CYC6_CLITE (C0HKF9), CYC7_CHACT (I0B6F4), CYC7_CLITE (G1CWH5), CYC8_CHACT (I0B6F5), CYC8_CLITE (G1CWH6), CYC9_CHACT (C0HKH0), CYC9_CLITE (C0HKG0), CYCA_CLITE (P86841), CYCA_PETHY (B3EWH5), CYCB_CLITE (P86842), CYCC_CLITE (P86843), CYCD_CLITE (P86844), CYCE_CLITE (P86845), CYCF_CLITE (P86846), CYCG_CLITE (P86847), CYCH_CLITE (P86848), CYCJ_CLITE (P86850), CYCK_CLITE (P86851), CYCL_CLITE (P86852), CYCM_PETHY (B3EWH7), CYCO_CLITE (P86901), CYCP_CLITE (P86902), CYCQ_CLITE (P86904), CYCR_CLITE (P86903), CYH1_VIOHE (P58433), CYH2_VIOHE (P85233), CYH4_VIOHE (P85234), CYHED_PIGEN (C0HLN8), CYHEE_PIGEN (C0HLN9), CYHEF_PIGEN (C0HLP0), CYHEG_PIGEN (C0HLP1), CYHEH_PIGEN (C0HLP2), CYHEI_PIGEN (C0HLP3), CYHEJ_PIGEN (C0HLP4), CYHEL_PIGEN (C0HLP6), CYHEM_PIGEN (C0HLP7), CYLA_PSYLO (P56872), CYM45_MELRA (A9P3S1), CYMC1_MELCT (C0HK35), CYMC4_MELCT (C0HK38), CYMC5_MELCT (C0HK39), CYMC6_MELCT (C0HK40), CYMEE_MELDN (C0HKI7), CYMEG_MELDN (C0HKI9), CYMEI_MELDN (C0HKJ1), CYMEJ_MELDN (C0HKJ2), CYMEK_MELDN (C0HKJ3), CYMEL_MELDN (C0HKJ4), CYMEM_MELDN (C0HKJ5), CYMEN_MELDN (C0HKJ6), CYMR1_MELRA (C0HL32), CYMR2_MELRA (C0HL33), CYMR3_MELRA (C0HL34), CYO10_VIOOD (P58442), CYO11_VIOOD (P58443), CYO13_VIOOD (Q5USN8), CYO17_PSYBR (C0HL23), CYO17_VIOOD (P85180), CYO18_VIOOD (P85181), CYO19_VIOOD (P85182), CYO1_VIOOD (P82230), CYO20_VIOOD (P85183), CYO2_PIGEN (C0HLP8), CYO2_VIOBI (P85526), CYO2_VIOOD (P58434), CYO3_VIOOD (P58435), CYO4_VIOOD (P58436), CYO5_VIOOD (P58437), CYO6_VIOOD (P58438), CYO7_VIOOD (P58439), CYO8_VIOOD (P58440), CYO9_VIOBI (B1NRR2), CYO9_VIOOD (P58441), CYPLA_PALGU (C0HKJ9), CYVA_LEOCM (P84637), CYVA_VIOCT (P84635), CYVB_VIOCT (P84636), CYVC_LEOCM (P84639), CYVD_LEOCM (P84640), CYVE_VIOBI (B1NRQ8), CYVF_VIOBI (P85244), CYVG_VIOBI (P85245), CYVH_VIOBI (P85246), CYVIA_VIODI (C0HKK0), CYVI_VIOBI (B1NRQ9), CYVJ_VIOBI (B1NRR0), CYVK_VIOBI (B1NRR1), CYVUA_VIOPU (C0HKK3), CYVUB_VIOPU (C0HKK4), CYVUC_VIOPU (C0HKK5), HYFLA_HYBFL (P84647), HYPAA_POMPR (P58445), KAB16_OLDAF (P85134), KAB17_OLDAF (P85135), KAB5_OLDAF (P58456), PABR1_PALRI (B3EWF1), VHL1_VIOHE (P84522), VHR1_VIOHE (P83937), VITA_VIOAR (P83840), VITA_VIOBI (B1NRR3)» more
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UniProtKB/Swiss-Prot False negative sequences |
8 sequences
CYCK_PETHY (B3EWH6), CYGPA_GLOPU (C0HL35), CYGPB_GLOPU (C0HL36), CYO25_VIOOD (P85188), CYV1_VIOOD (C0HL14), CYV2_VIOOD (C0HL15), CYV3_VIOOD (C0HL16), KAB8_OLDAF (P85175)» more |
PDB [Detailed view] |
12 PDB
1BH4; 1NBJ; 1VB8; 1ZA8; 2ERI; 2KCG; 2KNM; 2KUX; 7RIH; 7RMQ; 7RN3; 7S55 |