Entry: PS60008

Forthcoming changes to the profile format
General information about the entry

Entry name [info] CYCLOTIDE_BRACELET
Accession [info] PS60008
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); OCT-2005 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides bracelet subfamily signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.

Total number of hits 68 in 68 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.77 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 11
Version [info] 2

Cross-references [info]

True positive sequences
68 sequences

CIRA_CHAPA  (P56871), CIRB_CHAPA  (P56879), CIRC_CHAPA  (P84641), 
CIRD_CHAPA  (P84642), CIRE_CHAPA  (P84643), CIRF_CHAPA  (P84644), 
CYCA_CLITE  (P86841), CYCA_PETHY  (B3EWH5), CYCB_CLITE  (P86842), 
CYCC_CLITE  (P86843), CYCD_CLITE  (P86844), CYCE_CLITE  (P86845), 
CYCF_CLITE  (P86846), CYCG_CLITE  (P86847), CYCH_CLITE  (P86848), 
CYCI_CLITE  (P86849), CYCJ_CLITE  (P86850), CYCK_CLITE  (P86851), 
CYCL_CLITE  (P86852), CYCM_PETHY  (B3EWH7), CYCO_CLITE  (P86901), 
CYCP_CLITE  (P86902), CYCQ_CLITE  (P86904), CYCR_CLITE  (P86903), 
CYH1_VIOHE  (P58433), CYH2_VIOHE  (P85233), CYH4_VIOHE  (P85234), 
CYLA_PSYLO  (P56872), CYO10_VIOOD (P58442), CYO11_VIOOD (P58443), 
CYO13_VIOOD (Q5USN8), CYO17_VIOOD (P85180), CYO18_VIOOD (P85181), 
CYO19_VIOOD (P85182), CYO1_VIOOD  (P82230), CYO20_VIOOD (P85183), 
CYO2_VIOBI  (P85526), CYO2_VIOOD  (P58434), CYO3_VIOOD  (P58435), 
CYO4_VIOOD  (P58436), CYO5_VIOOD  (P58437), CYO6_VIOOD  (P58438), 
CYO7_VIOOD  (P58439), CYO8_VIOOD  (P58440), CYO9_VIOBI  (B1NRR2), 
CYO9_VIOOD  (P58441), CYVA_LEOCM  (P84637), CYVA_VIOCT  (P84635), 
CYVB_VIOCT  (P84636), CYVC_LEOCM  (P84639), CYVD_LEOCM  (P84640), 
CYVE_VIOBI  (B1NRQ8), CYVF_VIOBI  (P85244), CYVG_VIOBI  (P85245), 
KAB16_OLDAF (P85134), KAB17_OLDAF (P85135), KAB5_OLDAF  (P58456), 
PABR1_PALRI (B3EWF1), VHL1_VIOHE  (P84522), VHR1_VIOHE  (P83937), 
» More

False negative sequences
3 sequences

CYCK_PETHY  (B3EWH6), CYO25_VIOOD (P85188), KAB8_OLDAF  (P85175)


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission