Entry: PS60008

General information about the entry

Entry name [info] CYCLOTIDE_BRACELET
Accession [info] PS60008
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); OCT-2005 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides bracelet subfamily signature.
Pattern [info]
C-x(0,1)-[ES]-S-C-[AV]-[MFYW]-I-[PS]-x(0,1)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 68 in 68 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.77 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 11
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
68 sequences

CIRA_CHAPA  (P56871), CIRB_CHAPA  (P56879), CIRC_CHAPA  (P84641), 
CIRD_CHAPA  (P84642), CIRE_CHAPA  (P84643), CIRF_CHAPA  (P84644), 
CYCA_CLITE  (P86841), CYCA_PETHY  (B3EWH5), CYCB_CLITE  (P86842), 
CYCC_CLITE  (P86843), CYCD_CLITE  (P86844), CYCE_CLITE  (P86845), 
CYCF_CLITE  (P86846), CYCG_CLITE  (P86847), CYCH_CLITE  (P86848), 
CYCI_CLITE  (P86849), CYCJ_CLITE  (P86850), CYCK_CLITE  (P86851), 
CYCL_CLITE  (P86852), CYCM_PETHY  (B3EWH7), CYCO_CLITE  (P86901), 
CYCP_CLITE  (P86902), CYCQ_CLITE  (P86904), CYCR_CLITE  (P86903), 
CYH1_VIOHE  (P58433), CYH2_VIOHE  (P85233), CYH4_VIOHE  (P85234), 
CYLA_PSYLO  (P56872), CYO10_VIOOD (P58442), CYO11_VIOOD (P58443), 
CYO13_VIOOD (Q5USN8), CYO17_VIOOD (P85180), CYO18_VIOOD (P85181), 
CYO19_VIOOD (P85182), CYO1_VIOOD  (P82230), CYO20_VIOOD (P85183), 
CYO2_VIOBI  (P85526), CYO2_VIOOD  (P58434), CYO3_VIOOD  (P58435), 
CYO4_VIOOD  (P58436), CYO5_VIOOD  (P58437), CYO6_VIOOD  (P58438), 
CYO7_VIOOD  (P58439), CYO8_VIOOD  (P58440), CYO9_VIOBI  (B1NRR2), 
CYO9_VIOOD  (P58441), CYVA_LEOCM  (P84637), CYVA_VIOCT  (P84635), 
CYVB_VIOCT  (P84636), CYVC_LEOCM  (P84639), CYVD_LEOCM  (P84640), 
CYVE_VIOBI  (B1NRQ8), CYVF_VIOBI  (P85244), CYVG_VIOBI  (P85245), 
CYVH_VIOBI  (P85246), CYVI_VIOBI  (B1NRQ9), CYVJ_VIOBI  (B1NRR0), 
CYVK_VIOBI  (B1NRR1), HYFLA_HYBFL (P84647), HYPAA_HYBPA (P58445), 
KAB16_OLDAF (P85134), KAB17_OLDAF (P85135), KAB5_OLDAF  (P58456), 
PABR1_PALRI (B3EWF1), VHL1_VIOHE  (P84522), VHR1_VIOHE  (P83937), 
VITA_VIOAR  (P83840), VITA_VIOBI  (B1NRR3)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CYCK_PETHY  (B3EWH6), CYO25_VIOOD (P85188), KAB8_OLDAF  (P85175)

		
PDB
[Detailed view]
8 PDB

1BH4; 1NBJ; 1VB8; 1ZA8; 2ERI; 2KCG; 2KNM; 2KUX

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