Entry: PS60008

General information about the entry

Entry name [info] CYCLOTIDE_BRACELET
Accession [info] PS60008
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); OCT-2005 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides bracelet subfamily signature.
Pattern [info]
C-x(0,1)-[ES]-S-C-[AV]-[MFYW]-I-[PS]-x(0,1)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 70 in 70 different sequences
Number of true positive hits 70 in 70 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.89 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 11
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
70 sequences

CIRA_CHAPA  (P56871    ), CIRB_CHAPA  (P56879    ), CIRC_CHAPA  (P84641    ), 
CIRD_CHAPA  (P84642    ), CIRE_CHAPA  (P84643    ), CIRF_CHAPA  (P84644    ), 
CYC13_CLITE (C0HJS0    ), CYC14_CLITE (C0HJS1    ), CYC17_CLITE (P86849    ), 
CYCA_CLITE  (P86841    ), CYCA_PETHY  (B3EWH5    ), CYCB_CLITE  (P86842    ), 
CYCC_CLITE  (P86843    ), CYCD_CLITE  (P86844    ), CYCE_CLITE  (P86845    ), 
CYCF_CLITE  (P86846    ), CYCG_CLITE  (P86847    ), CYCH_CLITE  (P86848    ), 
CYCJ_CLITE  (P86850    ), CYCK_CLITE  (P86851    ), CYCL_CLITE  (P86852    ), 
CYCM_PETHY  (B3EWH7    ), CYCO_CLITE  (P86901    ), CYCP_CLITE  (P86902    ), 
CYCQ_CLITE  (P86904    ), CYCR_CLITE  (P86903    ), CYH1_VIOHE  (P58433    ), 
CYH2_VIOHE  (P85233    ), CYH4_VIOHE  (P85234    ), CYLA_PSYLO  (P56872    ), 
CYO10_VIOOD (P58442    ), CYO11_VIOOD (P58443    ), CYO13_VIOOD (Q5USN8    ), 
CYO17_VIOOD (P85180    ), CYO18_VIOOD (P85181    ), CYO19_VIOOD (P85182    ), 
CYO1_VIOOD  (P82230    ), CYO20_VIOOD (P85183    ), CYO2_VIOBI  (P85526    ), 
CYO2_VIOOD  (P58434    ), CYO3_VIOOD  (P58435    ), CYO4_VIOOD  (P58436    ), 
CYO5_VIOOD  (P58437    ), CYO6_VIOOD  (P58438    ), CYO7_VIOOD  (P58439    ), 
CYO8_VIOOD  (P58440    ), CYO9_VIOBI  (B1NRR2    ), CYO9_VIOOD  (P58441    ), 
CYVA_LEOCM  (P84637    ), CYVA_VIOCT  (P84635    ), CYVB_VIOCT  (P84636    ), 
CYVC_LEOCM  (P84639    ), CYVD_LEOCM  (P84640    ), CYVE_VIOBI  (B1NRQ8    ), 
CYVF_VIOBI  (P85244    ), CYVG_VIOBI  (P85245    ), CYVH_VIOBI  (P85246    ), 
CYVI_VIOBI  (B1NRQ9    ), CYVJ_VIOBI  (B1NRR0    ), CYVK_VIOBI  (B1NRR1    ), 
HYFLA_HYBFL (P84647    ), HYPAA_HYBPA (P58445    ), KAB16_OLDAF (P85134    ), 
KAB17_OLDAF (P85135    ), KAB5_OLDAF  (P58456    ), PABR1_PALRI (B3EWF1    ), 
VHL1_VIOHE  (P84522    ), VHR1_VIOHE  (P83937    ), VITA_VIOAR  (P83840    ), 
VITA_VIOBI  (B1NRR3    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

CYCK_PETHY  (B3EWH6    ), CYO25_VIOOD (P85188    ), KAB8_OLDAF  (P85175    )

		
PDB
[Detailed view]
8 PDB

1BH4; 1NBJ; 1VB8; 1ZA8; 2ERI; 2KCG; 2KNM; 2KUX

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