Entry: PS60009

General information about the entry

Entry name [info] CYCLOTIDE_MOEBIUS
Accession [info] PS60009
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); APR-2006 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides Moebius subfamily signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 46 in 40 different sequences
Number of true positive hits 46 in 40 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.20 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 10
Version [info] 2

Cross-references [info]

True positive sequences
40 sequences

CYCM_CLITE  (P86899), CYCN_CLITE  (P86900), CYH3_VIOHE  (P85232), 
CYO12_VIOAR (P83835), CYO12_VIOOD (P83836), CYO15_VIOOD (P85178), 
CYO16_VIOOD (P85179), CYO21_VIOOD (P85184), CYO22_VIOOD (P85185), 
CYO23_VIOOD (P85186), CYO24_VIOOD (P85187), CYVA_VIOBI  (P85239), 
CYVB_VIOBI  (P85240), HYFLB_HYBFL (P84648), HYFLC_HYBFL (P84649), 
KAB10_OLDAF (P85128), KAB11_OLDAF (P85129), KAB13_OLDAF (P85131), 
KAB14_OLDAF (P85132), KAB15_OLDAF (P85133), KAB1_OLDAF  (P56254), 
KAB2_OLDAF  (P58454), KAB3_OLDAF  (P58455), KAB4_OLDAF  (P83938), 
KAB7_OLDAF  (P58457), KAB9_OLDAF  (P85127), KABS_OLDAF  (P58458), 
TRIC_VIOAR  (P0C589), VARA_VIOAR  (P58446), VARA_VIOBI  (P85525), 
VARA_VIOOD  (Q5USN7), VARB_VIOAR  (P58447), VARC_VIOAR  (P58448), 
VARD_VIOAR  (P58449), VARF_VIOAR  (P58451), VARG_VIOAR  (P58452), 
VARH_VIOAR  (P58453), VHL2_VIOHE  (P85231), VODM_VIOOD  (P83839), 
VODN_VIOOD  (P83838)
» more

False negative sequences
5 sequences

CYO14_VIOOD (P85177), CYVC_VIOBI  (P85241), CYVD_VIOBI  (P85242), 
» more

[Detailed view]
24 PDB

1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 2MN1; 2MW0; 3E4H; 4TTM; 4TTN; 4TTO
» more

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