Entry: PS60009

General information about the entry

Entry name [info] CYCLOTIDE_MOEBIUS
Accession [info] PS60009
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); APR-2006 (DATA UPDATE); MAR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides Moebius subfamily signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_05 which contains 548'454 sequence entries.

Total number of hits 46 in 40 different sequences
Number of true positive hits 46 in 40 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.20 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 10
Version [info] 2

Cross-references [info]

True positive sequences
40 sequences

CYCM_CLITE  (P86899), CYCN_CLITE  (P86900), CYH3_VIOHE  (P85232), 
CYO12_VIOAR (P83835), CYO12_VIOOD (P83836), CYO15_VIOOD (P85178), 
CYO16_VIOOD (P85179), CYO21_VIOOD (P85184), CYO22_VIOOD (P85185), 
CYO23_VIOOD (P85186), CYO24_VIOOD (P85187), CYVA_VIOBI  (P85239), 
CYVB_VIOBI  (P85240), HYFLB_HYBFL (P84648), HYFLC_HYBFL (P84649), 
KAB10_OLDAF (P85128), KAB11_OLDAF (P85129), KAB13_OLDAF (P85131), 
KAB14_OLDAF (P85132), KAB15_OLDAF (P85133), KAB1_OLDAF  (P56254), 
KAB2_OLDAF  (P58454), KAB3_OLDAF  (P58455), KAB4_OLDAF  (P83938), 
KAB7_OLDAF  (P58457), KAB9_OLDAF  (P85127), KABS_OLDAF  (P58458), 
TRIC_VIOAR  (P0C589), VARA_VIOAR  (P58446), VARA_VIOBI  (P85525), 
VARA_VIOOD  (Q5USN7), VARB_VIOAR  (P58447), VARC_VIOAR  (P58448), 
VARD_VIOAR  (P58449), VARF_VIOAR  (P58451), VARG_VIOAR  (P58452), 
VARH_VIOAR  (P58453), VHL2_VIOHE  (P85231), VODM_VIOOD  (P83839), 
VODN_VIOOD  (P83838)
» More

False negative sequences
5 sequences

CYO14_VIOOD (P85177), CYVC_VIOBI  (P85241), CYVD_VIOBI  (P85242), 
» More

[Detailed view]
22 PDB

1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 3E4H; 4TTM; 4TTN; 4TTO
» More

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