Entry: PS60009

General information about the entry

Entry name [info] CYCLOTIDE_MOEBIUS
Accession [info] PS60009
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides Moebius subfamily signature.
Pattern [info]
C-[GA]-E-[ST]-C-[FTV]-[GLTI]-G-[TSK]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 47 in 41 different sequences
Number of true positive hits 47 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.45 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 10
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

CYC18_CLITE (C0HJS5    ), CYCM_CLITE  (P86899    ), CYCN_CLITE  (P86900    ), 
CYH3_VIOHE  (P85232    ), CYO12_VIOAR (P83835    ), CYO12_VIOOD (P83836    ), 
CYO15_VIOOD (P85178    ), CYO16_VIOOD (P85179    ), CYO21_VIOOD (P85184    ), 
CYO22_VIOOD (P85185    ), CYO23_VIOOD (P85186    ), CYO24_VIOOD (P85187    ), 
CYVA_VIOBI  (P85239    ), CYVB_VIOBI  (P85240    ), HYFLB_HYBFL (P84648    ), 
HYFLC_HYBFL (P84649    ), KAB10_OLDAF (P85128    ), KAB11_OLDAF (P85129    ), 
KAB13_OLDAF (P85131    ), KAB14_OLDAF (P85132    ), KAB15_OLDAF (P85133    ), 
KAB1_OLDAF  (P56254    ), KAB2_OLDAF  (P58454    ), KAB3_OLDAF  (P58455    ), 
KAB4_OLDAF  (P83938    ), KAB7_OLDAF  (P58457    ), KAB9_OLDAF  (P85127    ), 
KABS_OLDAF  (P58458    ), TRIC_VIOAR  (P0C589    ), VARA_VIOAR  (P58446    ), 
VARA_VIOBI  (P85525    ), VARA_VIOOD  (Q5USN7    ), VARB_VIOAR  (P58447    ), 
VARC_VIOAR  (P58448    ), VARD_VIOAR  (P58449    ), VARF_VIOAR  (P58451    ), 
VARG_VIOAR  (P58452    ), VARH_VIOAR  (P58453    ), VHL2_VIOHE  (P85231    ), 
VODM_VIOOD  (P83839    ), VODN_VIOOD  (P83838    )
» more

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

CYC15_CLITE (C0HJS2    ), CYC19_CLITE (C0HJS6    ), CYC20_CLITE (C0HJS7    ), 
CYO14_VIOOD (P85177    ), CYVC_VIOBI  (P85241    ), CYVD_VIOBI  (P85242    ), 
KAB12_OLDAF (P85130    ), VIOLA_VIOOD (Q2HY54    )
» more

PDB
[Detailed view]
24 PDB

1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 2MN1; 2MW0; 3E4H; 4TTM; 4TTN; 4TTO
» more

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