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Entry: PS60009

General information about the entry

Entry name [info] CYCLOTIDE_MOEBIUS
Accession [info] PS60009
Entry type [info] PATTERN
Date [info] 01-DEC-2004 CREATED; 01-APR-2006 DATA UPDATE; 25-OCT-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides Moebius subfamily signature.
Pattern [info]
C-[GA]-E-[ST]-C-[FTV]-[GLTI]-G-[TSK]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_10 which contains 556'006 sequence entries.


Total number of hits 63 in 57 different sequences
Number of true positive hits 63 in 57 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 16
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 79.75 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 10
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
57 sequences

CYC18_CLITE (C0HJS5    ), CYCM_CLITE  (P86899    ), CYCN_CLITE  (P86900    ), 
CYH3_VIOHE  (P85232    ), CYMBA_MELOB (C0HKJ7    ), CYMC2_MELCT (C0HK36    ), 
CYMC3_MELCT (C0HK37    ), CYMC7_MELCT (C0HK41    ), CYMEA_MELDN (C0HKI4    ), 
CYMEB_MELDN (C0HKI5    ), CYMNA_MELAG (C0HKI3    ), CYO12_VIOAR (P83835    ), 
CYO12_VIOOD (P83836    ), CYO15_VIOOD (P85178    ), CYO16_VIOOD (P85179    ), 
CYO21_VIOOD (P85184    ), CYO22_VIOOD (P85185    ), CYO23_VIOOD (P85186    ), 
CYO24_VIOOD (P85187    ), CYPLA_PSYBR (C0HL24    ), CYPLA_PSYLE (C0HL27    ), 
CYPLB_PSYBR (C0HL25    ), CYPLB_PSYLE (C0HL28    ), CYPLC_PSYLE (C0HL29    ), 
CYPLD_PSYBR (C0HL26    ), CYPLD_PSYLE (C0HL30    ), CYPLE_PSYLE (C0HL31    ), 
CYVA_VIOBI  (P85239    ), CYVB_VIOBI  (P85240    ), CYVNA_VIOIN (C0HKK1    ), 
HYFLB_HYBFL (P84648    ), HYFLC_HYBFL (P84649    ), KAB10_OLDAF (P85128    ), 
KAB11_OLDAF (P85129    ), KAB13_OLDAF (P85131    ), KAB14_OLDAF (P85132    ), 
KAB15_OLDAF (P85133    ), KAB1_OLDAF  (P56254    ), KAB2_OLDAF  (P58454    ), 
KAB3_OLDAF  (P58455    ), KAB4_OLDAF  (P83938    ), KAB7_OLDAF  (P58457    ), 
KAB9_OLDAF  (P85127    ), KABS_OLDAF  (P58458    ), TRIC_VIOAR  (P0C589    ), 
VARA_VIOAR  (P58446    ), VARA_VIOBI  (P85525    ), VARA_VIOOD  (Q5USN7    ), 
VARB_VIOAR  (P58447    ), VARC_VIOAR  (P58448    ), VARD_VIOAR  (P58449    ), 
VARF_VIOAR  (P58451    ), VARG_VIOAR  (P58452    ), VARH_VIOAR  (P58453    ), 
VHL2_VIOHE  (P85231    ), VODM_VIOOD  (P83839    ), VODN_VIOOD  (P83838    )
» more

UniProtKB/Swiss-Prot
False negative sequences
16 sequences

CYC15_CLITE (C0HJS2    ), CYC19_CLITE (C0HJS6    ), CYC20_CLITE (C0HJS7    ), 
CYGPC_GLOPU (C0HL37    ), CYML1_MELLF (C0HK28    ), CYML2_MELLF (C0HK29    ), 
CYML3_MELLF (C0HK30    ), CYML4_MELLF (C0HK31    ), CYML5_MELLF (C0HK32    ), 
CYML6_MELLF (C0HK33    ), CYML7_MELLF (C0HK34    ), CYO14_VIOOD (P85177    ), 
CYVC_VIOBI  (P85241    ), CYVD_VIOBI  (P85242    ), KAB12_OLDAF (P85130    ), 
VIOLA_VIOOD (Q2HY54    )
» more

PDB
[Detailed view]
24 PDB

1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 2MN1; 2MW0; 3E4H; 4TTM; 4TTN; 4TTO
» more

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