Entry: PS60009

Forthcoming changes to the profile format
General information about the entry

Entry name [info] CYCLOTIDE_MOEBIUS
Accession [info] PS60009
Entry type [info] PATTERN
Date [info] DEC-2004 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides Moebius subfamily signature.
Pattern [info]
C-[GA]-E-[ST]-C-[FTV]-[GLTI]-G-[TSK]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 46 in 40 different sequences
Number of true positive hits 46 in 40 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 90.20 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 10
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
40 sequences

CYCM_CLITE  (P86899), CYCN_CLITE  (P86900), CYH3_VIOHE  (P85232), 
CYO12_VIOAR (P83835), CYO12_VIOOD (P83836), CYO15_VIOOD (P85178), 
CYO16_VIOOD (P85179), CYO21_VIOOD (P85184), CYO22_VIOOD (P85185), 
CYO23_VIOOD (P85186), CYO24_VIOOD (P85187), CYVA_VIOBI  (P85239), 
CYVB_VIOBI  (P85240), HYFLB_HYBFL (P84648), HYFLC_HYBFL (P84649), 
KAB10_OLDAF (P85128), KAB11_OLDAF (P85129), KAB13_OLDAF (P85131), 
KAB14_OLDAF (P85132), KAB15_OLDAF (P85133), KAB1_OLDAF  (P56254), 
KAB2_OLDAF  (P58454), KAB3_OLDAF  (P58455), KAB4_OLDAF  (P83938), 
KAB7_OLDAF  (P58457), KAB9_OLDAF  (P85127), KABS_OLDAF  (P58458), 
TRIC_VIOAR  (P0C589), VARA_VIOAR  (P58446), VARA_VIOBI  (P85525), 
VARA_VIOOD  (Q5USN7), VARB_VIOAR  (P58447), VARC_VIOAR  (P58448), 
VARD_VIOAR  (P58449), VARF_VIOAR  (P58451), VARG_VIOAR  (P58452), 
VARH_VIOAR  (P58453), VHL2_VIOHE  (P85231), VODM_VIOOD  (P83839), 
VODN_VIOOD  (P83838)
» More

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

CYO14_VIOOD (P85177), CYVC_VIOBI  (P85241), CYVD_VIOBI  (P85242), 
KAB12_OLDAF (P85130), VIOLA_VIOOD (Q2HY54)
» More

PDB
[Detailed view]
19 PDB

1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 3E4H
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission