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PROSITE entry PS60009


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General information about the entry

Entry name [info] CYCLOTIDE_MOEBIUS
Accession [info] PS60009
Entry type [info] PATTERN
Date [info] 01-DEC-2004 CREATED;
01-APR-2006 DATA UPDATE;
27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51052

Name and characterization of the entry

Description [info] Cyclotides Moebius subfamily signature.
Pattern [info]
C-[GA]-E-[ST]-C-[FTV]-[GLTI]-G-[TSK]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.


Total number of hits 64 in 58 different sequences
Number of true positive hits 64 in 58 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 16
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 80.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 10
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

CYC18_CLITE (C0HJS5), CYC3_CLITE  (C0HKG1), CYCM_CLITE  (P86899), 
CYCN_CLITE  (P86900), CYH3_VIOHE  (P85232), CYMBA_MELOB (C0HKJ7), 
CYMC2_MELCT (C0HK36), CYMC3_MELCT (C0HK37), CYMC7_MELCT (C0HK41), 
CYMEA_MELDN (C0HKI4), CYMEB_MELDN (C0HKI5), CYMNA_MELAG (C0HKI3), 
CYO12_VIOAR (P83835), CYO12_VIOOD (P83836), CYO15_VIOOD (P85178), 
CYO16_VIOOD (P85179), CYO21_VIOOD (P85184), CYO22_VIOOD (P85185), 
CYO23_VIOOD (P85186), CYO24_VIOOD (P85187), CYPLA_PSYBR (C0HL24), 
CYPLA_PSYLE (C0HL27), CYPLB_PSYBR (C0HL25), CYPLB_PSYLE (C0HL28), 
CYPLC_PSYLE (C0HL29), CYPLD_PSYBR (C0HL26), CYPLD_PSYLE (C0HL30), 
CYPLE_PSYLE (C0HL31), CYVA_VIOBI  (P85239), CYVB_VIOBI  (P85240), 
CYVNA_VIOIN (C0HKK1), HYFLB_HYBFL (P84648), HYFLC_HYBFL (P84649), 
KAB10_OLDAF (P85128), KAB11_OLDAF (P85129), KAB13_OLDAF (P85131), 
KAB14_OLDAF (P85132), KAB15_OLDAF (P85133), KAB1_OLDAF  (P56254), 
KAB2_OLDAF  (P58454), KAB3_OLDAF  (P58455), KAB4_OLDAF  (P83938), 
KAB7_OLDAF  (P58457), KAB9_OLDAF  (P85127), KABS_OLDAF  (P58458), 
TRIC_VIOAR  (P0C589), VARA_VIOAR  (P58446), VARA_VIOBI  (P85525), 
VARA_VIOOD  (Q5USN7), VARB_VIOAR  (P58447), VARC_VIOAR  (P58448), 
VARD_VIOAR  (P58449), VARF_VIOAR  (P58451), VARG_VIOAR  (P58452), 
VARH_VIOAR  (P58453), VHL2_VIOHE  (P85231), VODM_VIOOD  (P83839), 
VODN_VIOOD  (P83838)
» more

UniProtKB/Swiss-Prot
False negative sequences
16 sequences

CYC15_CLITE (C0HJS2), CYC19_CLITE (C0HJS6), CYC20_CLITE (C0HJS7), 
CYGPC_GLOPU (C0HL37), CYML1_MELLF (C0HK28), CYML2_MELLF (C0HK29), 
CYML3_MELLF (C0HK30), CYML4_MELLF (C0HK31), CYML5_MELLF (C0HK32), 
CYML6_MELLF (C0HK33), CYML7_MELLF (C0HK34), CYO14_VIOOD (P85177), 
CYVC_VIOBI  (P85241), CYVD_VIOBI  (P85242), KAB12_OLDAF (P85130), 
VIOLA_VIOOD (Q2HY54)
» more

PDB
[Detailed view]
27 PDB

1JJZ; 1K48; 1KAL; 1NB1; 1ORX; 1PT4; 1YP8; 1ZNU; 2F2I; 2F2J; 2JUE; 2JWM; 2K7G; 2KCH; 2KHB; 2KUK; 2LAM; 2M9O; 2MH1; 2MN1; 2MW0; 3E4H; 4TTM; 4TTN; 4TTO; 7LHC; 7RFA
» more