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Entry: PS60011

General information about the entry

Entry name [info] PLANT_C6_AMP
Accession [info] PS60011
Entry type [info] PATTERN
Date [info] 01-MAR-2005 CREATED; 01-OCT-2006 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC60011

Name and characterization of the entry

Description [info] Plant C6 type antimicrobial peptide (AMP) signature.
Pattern [info]
C-[IV]-x(2,4)-[RG]-C-x(2,6)-[GP]-x-C-C-S-x(2,4)-C-x-{C}-x(4,8)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 9 in 9 different sequences
Number of true positive hits 9 in 9 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 5
Site [info] disulfide at position 9
Site [info] disulfide at position 10
Site [info] disulfide at position 13
Site [info] disulfide at position 15
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
9 sequences

ALO1_ACRLO  (P83651    ), ALO2_ACRLO  (P83652    ), ALO3_ACRLO  (P83653    ), 
AMP1_MESCR  (O81338    ), AMP1_MIRJA  (P25403    ), AMP2_MIRJA  (P25404    ), 
AMP_AMACA   (P27275    ), AMP_AMARE   (Q5I2B2    ), PAFP_PHYAM  (P81418    )
» more

PDB
[Detailed view]
6 PDB

1DKC; 1MMC; 1Q3J; 1ZNT; 1ZUV; 1ZWU

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Direct ScanProsite submission