PROSITE entry PS60011
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General information about the entry
| Entry name [info] | PLANT_C6_AMP |
| Accession [info] | PS60011 |
| Entry type [info] | PATTERN |
| Date [info] |
01-MAR-2005 CREATED;
01-OCT-2006 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC60011 |
Name and characterization of the entry
| Description [info] | Plant C6 type antimicrobial peptide (AMP) signature. |
| Pattern [info] |
C-[IV]-x(2,4)-[RG]-C-x(2,6)-[GP]-x-C-C-S-x(2,4)-C-x-{C}-x(4,8)-C.
|
Numerical results [info]
| Total number of hits | 9 in 9 different sequences |
| Number of true positive hits | 9 in 9 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 5 |
| Site [info] | disulfide at position 9 |
| Site [info] | disulfide at position 10 |
| Site [info] | disulfide at position 13 |
| Site [info] | disulfide at position 15 |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
9 sequences
ALO1_ACRLO (P83651), ALO2_ACRLO (P83652), ALO3_ACRLO (P83653), AMP1_MESCR (O81338), AMP1_MIRJA (P25403), AMP2_MIRJA (P25404), AMP_AMACA (P27275), AMP_AMARE (Q5I2B2), PAFP_PHYAM (P81418)» more
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| PDB [Detailed view] |
5 PDB
1DKC; 1MMC; 1Q3J; 1ZUV; 1ZWU |