Entry: PS60016

General information about the entry
Entry name OMEGA_ACTX_1
Accession number PS60016
Entry type PATTERN
Date JUN-2005 (CREATED); JUN-2005 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC60016
Name and characterization of the entry
DescriptionOmega-atracotoxin (ACTX) type 1 family signature.
Pattern C-[IT]-P-S-G-Q-P-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 12 hits in 12 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 12 hits in 12 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 70.59 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 1,disulfide
  • `Interesting' site in the pattern: 8,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
TOM1A_MISBR (P83588), TOT1A_ATRRO (P83580), TOT1A_HADVE (P56207), 
TOT1B_HADVE (P81595), TOT1C_ATRRO (A5A3H2), TOT1C_HADVE (P81596), 
TOT1D_ATRRO (A5A3H3), TOT1D_HADVE (P81597), TOT1E_ATRRO (A5A3H4), 
TOT1E_HADVE (P81598), TOT1F_ATRRO (A5A3H5), TOT1F_HADVE (P81599)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
TOT1A_HADIN (P0C2L5), TOT1B_ATRRO (A5A3H1), TOT1B_HADFO (P0C2L4), 
TOT1B_HADIN (P0C2L6), TOT1C_HADIN (P0C2L7)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1AXH; 1HVW; 1ZJV;

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