Entry: PS60018

General information about the entry
Entry name DELTA_ACTX
Accession number PS60018
Entry type PATTERN
Date JUN-2005 (CREATED); JUN-2005 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC60018
Name and characterization of the entry
DescriptionDelta-atracotoxin (ACTX) family signature.
Pattern C-x(5)-W-C-x(4)-D-C-C-C-x(3)-C-x(2)-A-W-Y-x(5)-C-x(10,11)-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 6 hits in 6 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 6 hits in 6 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 85.71 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 1,disulfide
  • `Interesting' site in the pattern: 4,disulfide
  • `Interesting' site in the pattern: 7,disulfide
  • `Interesting' site in the pattern: 8,disulfide
  • `Interesting' site in the pattern: 9,disulfide
  • `Interesting' site in the pattern: 11,disulfide
  • `Interesting' site in the pattern: 17,disulfide
  • `Interesting' site in the pattern: 19,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
TDM1A_MISBR (P83608), TDT1B_HADVE (P81885), TXDT1_ATRRO (P01478), 
TXDT1_HADSP (P0C1R3), TXDT1_HADVE (P13494), TXMG4_MACGS (P83560)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
TXM14_MACGS (Q75WG5)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1QDP; 1VTX; 2ROO;

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