{PDOC00111} {PS00121; COLIPASE_1} {PS51342; COLIPASE_2} {BEGIN} ***************************************** * Colipase family signature and profile * ***************************************** Colipase [1,2,3] is a protein that functions as a cofactor for pancreatic lipase, with which it forms a stoichiometric complex. It also binds to the bile-salt covered triacylglycerol interface thus allowing the enzyme to anchor itself to the water-lipid interface. As shown in the following schematic representation, colipase is a small protein of approximately 100 amino-acid residues with five conserved disulfide bonds. +--------+ +--|--+ | +----------+ | | | | | ***** | xxxxxxxxCxxCxCCxxxxxCxxxxCxxxxxCxCxxCxxxxxxxxCxxxx | | | | +-----------------+ +-----------+ 'C': conserved cysteine involved in a disulfide bond. '*': position of the pattern. As a signature pattern for this family, we chose a region which includes two of the cysteines involved in disulfide bonds, as well as three tyrosine residues which seem to be involved in the interfacial binding. We also developed a profile that covers the whole colipase. -Consensus pattern: Y-x(2)-Y-Y-x-C-x-C [The 2 C's are involved in disulfide bonds] [The 3 Y's are involved in interfacial binding] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Sequences known to belong to this class detected by the profile: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Last update: December 2007 / Text revised; profile added. [ 1] Erlanson-Albertsson C. "Pancreatic colipase. Structural and physiological aspects." Biochim. Biophys. Acta 1125:1-7(1992). PubMed=1567900 [ 2] Chapus C., Rovery M., Sarda L., Verger R. "Minireview on pancreatic lipase and colipase." Biochimie 70:1223-1234(1988). PubMed=3147715 [ 3] van Tilbeurgh H., Sarda L., Verger R., Cambillau C. "Structure of the pancreatic lipase-procolipase complex." Nature 359:159-162(1992). PubMed=1522902; DOI=10.1038/359159a0 -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}