{PDOC00387} {PS00464; RIBOSOMAL_L22} {BEGIN} *********************************** * Ribosomal protein L22 signature * *********************************** Ribosomal protein L22 is one of the proteins from the large ribosomal subunit. In Escherichia coli, L22 is known to bind 23S rRNA. It belongs to a family of ribosomal proteins which, on the basis of sequence similarities [1,2,3], groups: - Eubacterial L22. - Algal and plant chloroplast L22 (in legumes L22 is encoded in the nucleus instead of the chloroplast). - Cyanelle L22. - Archaebacterial L22. - Mammalian L17. - Plant L17. - Yeast YL17. As a signature pattern, we selected a conserved region located in the C- terminal section of these proteins. -Consensus pattern: [RKQN]-x(2)-{G}-x-[RH]-[GAS]-x-G-[KRQS]-x(8)-{L}-[HDN]- [LIVM]-{A}-[LIVMS]-x-[LIVM] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: 7. -Last update: April 2006 / Pattern revised. [ 1] Gantt J.S., Baldauf S.L., Calie P.J., Weeden N.F., Palmer J.D. "Transfer of rpl22 to the nucleus greatly preceded its loss from the chloroplast and involved the gain of an intron." EMBO J. 10:3073-3078(1991). PubMed=1915281 [ 2] Madsen L.H., Kreiberg J.D., Gausing K. "A small gene family in barley encodes ribosomal proteins homologous to yeast YL17 and L22 from archaebacteria, eubacteria, and chloroplasts." Curr. Genet. 19:417-422(1991). PubMed=1913880 [ 3] Otaka E., Hashimoto T., Mizuta K., Suzuki K. Protein Seq. Data Anal. 5:301-313(1993). -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}