{PDOC00476} {PS00550; HEMERYTHRINS} {BEGIN} ******************************** * Hemerythrin family signature * ******************************** Marine invertebrates such as annelids or sipunculans possess two completely different types of oxygen binding proteins: globins which are found in the blood and hemerythrins which are found in the vascular system and the coelemic fluid or in muscles (myohemerythrins). Hemerythrins and myohemerythrins [1,2] are small proteins of about 110 to 129 amino acid residues that bind two iron atoms. Five histidines, one glutamic acid and one aspartic acid are involved in the binding of the iron atoms. Ovohemerythrin [3], a yolk protein from the leech Theromyzon tessulatum seems to belong to this family of proteins, it may play a role in the detoxification of free iron after a blood meal. A number of uncharacterized bacterial and archaeal proteins are evolutionary related to hemerythrins. As a signature pattern we selected a region, located in the central section of these proteins and that contains four of the iron-ligands: three histidines and a glutamate or glutamine. -Consensus pattern: H-F-x(2)-[EQ]-[ENQ]-x(2)-[LMF]-x(4,7)-[FY]-x(5,6)-H-x(3)- [HR] [The 3 H's and the first E/Q are iron ligands] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Last update: May 2004 / Text revised. [ 1] Sheriff S., Hendrickson W.A., Smith J.L. "Structure of myohemerythrin in the azidomet state at 1.7/1.3 A resolution." J. Mol. Biol. 197:273-296(1987). PubMed=3681996 [ 2] Uchida T., Yano H., Satake K., Kubota I., Tsugita A. "The amino acid sequence of hemerythrin from Siphonosoma cumanense." Protein Seq. Data Anal. 3:141-147(1990). PubMed=2362933 [ 3] Baert J.-L., Britel M., Sautiere P., Malecha J. "Ovohemerythrin, a major 14-kDa yolk protein distinct from vitellogenin in leech." Eur. J. Biochem. 209:563-569(1992). PubMed=1425663 -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}