{PDOC00536} {PS00614; IGPS} {BEGIN} ************************************************** * Indole-3-glycerol phosphate synthase signature * ************************************************** Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS) catalyzes the fourth step in the biosynthesis of tryptophan: the ring closure of 1-(2-carboxy- phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others - such as Escherichia coli - it is the N-terminal domain of a bifunctional enzyme that also catalyzes N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) activity, the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that also contains a PRAI C-terminal domain and a glutamine amidotransferase N-terminal domain. The N-terminal section of IGPS contains a highly conserved region which X-ray crystallography studies [1] have shown to be part of the active site cavity. We use this region as a signature pattern for IGPS. -Consensus pattern: [LIVMFY]-[LIVMC]-x-E-[LIVMFYC]-K-[KRSPQV]-[STAHKRYC]-S-P- [STRK]-x(3,7)-[LIVMFYST] -Sequences known to belong to this class detected by the pattern: ALL, except for Phytophthora parasitica IGPS which lack this region. -Other sequence(s) detected in Swiss-Prot: NONE. -Last update: April 2006 / Pattern revised. [ 1] Wilmanns M., Priestle J.P., Niermann T., Jansonius J.N. "Three-dimensional structure of the bifunctional enzyme phosphoribosylanthranilate isomerase: indoleglycerolphosphate synthase from Escherichia coli refined at 2.0 A resolution." J. Mol. Biol. 223:477-507(1992). PubMed=1738159 -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}