{PDOC00560} {PS00651; RIBOSOMAL_L9} {BEGIN} ********************************** * Ribosomal protein L9 signature * ********************************** Ribosomal protein L9 is one of the proteins from the large ribosomal subunit. In Escherichia coli, L9 is known to bind directly to the 23S rRNA. It belongs to a family of ribosomal proteins which, on the basis of sequence similarities [1,2], groups: - Eubacterial L9. - Cyanobacterial L9. - Plant chloroplast L9 (nuclear-encoded). - Red algal chloroplast L9. As a signature pattern, we have selected a conserved region, located in the N- terminal section of these proteins. -Consensus pattern: G-x(2)-[GNF]-x(4)-[VAI]-x(2)-G-[FY]-x(2)-[NH]-[FYWL]-L- x(5)-[GA]-x(3)-[STNG] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Last update: December 2004 / Pattern and text revised. [ 1] Hoffman D.W., Davies C., Gerchman S.E., Kycia J.H., Porter S.J., White S.W., Ramakrishnan V. "Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein." EMBO J. 13:205-212(1994). PubMed=8306963; [ 2] Otaka E., Hashimoto T., Mizuta K., Suzuki K. Protein Seq. Data Anal. 5:301-313(1993). -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}