{PDOC00732} {PS00951; ER_LUMEN_RECEPTOR_1} {PS00952; ER_LUMEN_RECEPTOR_2} {BEGIN} ************************************************** * ER lumen protein retaining receptor signatures * ************************************************** Proteins that reside in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide (generally K-D-E-L or H-D-E-L) that serves as a signal for their retrieval (retrograde transport) from subsequent compartments of the secretory pathway. The signal is recognized by a receptor molecule that is believed to cycle between the cis side of the Golgi apparatus and the ER [1]. This protein is known as the ER lumen protein retaining receptor or also as the 'KDEL receptor'. It has been characterized in a variety of species, including fungi (gene ERD2), plants, Plasmodium, Drosophila and mammals. In mammals two highly related forms of the receptor are known. Structurally, the receptor is a protein of about 220 residues that seems to contain seven transmembrane regions [2]. The N-terminal part (3 residues) is oriented toward the lumen while the C-terminal tail (about 12 residues) is cytoplasmic. There are three lumenal and three cytoplasmic loops. We developed two signature patterns for these receptors. The first pattern corresponds to the C-terminal half of the first cytoplasmic loop as well as most of the second transmembrane domain. The second pattern is a perfectly conserved decapeptide that corresponds to the central part of the fifth transmembrane domain. -Consensus pattern: G-[LIV]-S-x-[KR]-x-[QH]-x-L-[FY]-x-[LIV](2)-[FYW]-x(2)-R- Y -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Consensus pattern: L-E-[SA]-V-A-I-[LM]-P-Q-[LI] -Sequences known to belong to this class detected by the pattern: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Last update: December 2001 / Patterns and text revised. [ 1] Pelham H.R.B. "Recycling of proteins between the endoplasmic reticulum and Golgi complex." Curr. Opin. Cell Biol. 3:585-591(1991). PubMed=1663369 [ 2] Townsley F.M., Wilson D.W., Pelham H.R.B. "Mutational analysis of the human KDEL receptor: distinct structural requirements for Golgi retention, ligand binding and retrograde transport." EMBO J. 12:2821-2829(1993). PubMed=8392934 -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}