{PDOC50945} {PS50945; I_LWEQ} {BEGIN} ************************* * I/LWEQ domain profile * ************************* The I/LWEQ domain is a ~250-residue actin-binding module that is found in the C-termini of functionally diverse proteins from yeast to mammals. The I/LWEQ domain contains four conserved blocks and has been named after the conserved initial residues of blocks 1-4. The I/LWEQ domain is generally found near the C-terminus and in association with other domains, such as FERM (see ) or ENTH (see ). The I/LWEQ domain has been shown to bind to F-actin and to bundle actin filaments [1-3]. The I/LWEQ domain contains a proteolysis resistant-core that has an all-alpha- helical structure composed of five long down-up-down-up-down antiparallel helices connected by short loops and one short connecting alpha helix arranged in a progressive topology (see ). The proteolysis-resistant core is followed by a C-terminal latch region that adopts an alpha-helical conformation. The latch region can mediate oligomerization of I/LWEQ domains, possibly as dimers, and this seems to enhance the F-actin-binding ability of the proteolysis-resistant core [3]. Some proteins known to contain a I/LWEQ domain are listed below: - Animal talin, an actin-binding protein involved in integrin-mediated cell adhesion and spreading. - Slime mold talin homologs TalA and TalB. - Animal Huntingtin-interacting protein-1 (HIP1), a binding partner of huntingtin, the protein implicated in the etiology of Huntington disease in human. - Animal HIP1 related (HIP1R). It has a crucial protein-trafficking role, mediating associations between actin and chlathrin-coated structures et the plasma membrane and trans-Golgi network. - Yeast SLA2 protein. It is implicated in polarized assembly of the yeast actin cytoskeleton. - Slime mold filopodin, an actin-binding protein that may be involved in the control of cell motility and chemotaxis. The profile we developed covers the entire I/LWEQ domain. -Sequences known to belong to this class detected by the profile: ALL. -Other sequence(s) detected in Swiss-Prot: NONE. -Note: The I/LWEQ domain has also been called the talin-HIP1/R/Slap2p actin- tethering C-terminal homology (THATCH) domain (HIP1/R/Slap2p denotes similarity of Slap2p to HIP1 and HIP1R) [3]. -Last update: February 2006 / Profile and text revised. [ 1] McCann R.O., Craig S.W. "The I/LWEQ module: a conserved sequence that signifies F-actin binding in functionally diverse proteins from yeast to mammals." Proc. Natl. Acad. Sci. U.S.A. 94:5679-5684(1997). PubMed=9159132 [ 2] McCann R.O., Craig S.W. "Functional genomic analysis reveals the utility of the I/LWEQ module as a predictor of protein:actin interaction." Biochem. Biophys. Res. Commun. 266:135-140(1999). PubMed=10581178; DOI=10.1006/bbrc.1999.1776 [ 3] Brett T.J., Legendre-Guillemin V., McPherson P.S., Fremont D.H. "Structural definition of the F-actin-binding THATCH domain from HIP1R." Nat. Struct. Mol. Biol. 13:121-130(2006). PubMed=16415883; DOI=10.1038/nsmb1043 -------------------------------------------------------------------------------- PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see https://prosite.expasy.org/prosite_license.html -------------------------------------------------------------------------------- {END}