ID BCOV_NSP1_C; MATRIX. AC PS51963; DT 02-JUN-2021 CREATED; 02-JUN-2021 DATA UPDATE; 27-MAR-2024 INFO UPDATE. DE Betacoronavirus (BetaCoV) Nsp1 C-terminal domain profile. MA /GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=31; MA /DISJOINT: DEFINITION=PROTECT; N1=4; N2=28; MA /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6673212; R2=0.0082141; TEXT='-LogE'; MA /CUT_OFF: LEVEL=0; SCORE=954; N_SCORE=10.5; MODE=1; TEXT='!'; MA /CUT_OFF: LEVEL=-1; SCORE=467; N_SCORE=6.5; MODE=1; TEXT='?'; MA /DEFAULT: M0=-46; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; MA /I: B1=0; BI=-380; BD=-380; MA /M: SY='F'; M=-65,-74,68,52,72,-73,-60,-66,-57,-62,-65,-52,-67,-57,-64,-56,41,-65,-68,-47; MA /M: SY='P'; M=-3,-74,-62,-58,-67,-64,-62,-60,20,31,-55,35,78,-58,-61,35,-53,-62,-78,-68; MA /M: SY='G'; M=-53,47,-71,-75,-62,70,-71,-51,-71,-62,-59,-62,18,-71,-76,-57,-61,54,-72,33; MA /M: SY='P'; M=-60,-78,-53,62,-72,-72,-66,-64,-55,-70,-65,-62,77,-54,-65,-54,54,6,66,-67; MA /M: SY='D'; M=-15,-80,109,42,-87,-65,-54,-85,-53,-82,-80,-39,-65,-50,-61,-55,-58,-80,-97,-71; MA /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; MA /M: SY='P'; M=50,-79,-71,-60,-73,-63,-73,10,-65,-70,-63,-71,100,-65,-73,-57,-58,-61,71,-69; MA /M: SY='Y'; M=-68,61,-76,-76,-30,-80,-49,34,-70,2,42,-73,-81,-65,-68,-68,-63,-48,-43,110; MA /M: SY='E'; M=3,-75,66,68,-69,-69,-58,-65,-54,30,-59,-53,-65,-49,-61,5,-57,-64,-83,-67; MA /M: SY='D'; M=-66,-80,104,47,-82,-68,-54,-79,-52,-14,-73,-41,-65,5,-60,-57,-58,-77,-93,-69; MA /M: SY='F'; M=-65,-71,-83,-79,82,-83,-65,-35,-75,22,-44,-78,-83,-77,-73,-71,-61,55,-52,59; MA /M: SY='H'; M=-64,-83,-48,65,-76,-72,99,-76,-52,-69,36,-55,64,27,-56,-59,-62,-76,-85,-58; MA /I: I=-33; MI=0; MD=-84; IM=0; DM=-84; MA /M: SY='Q'; M=53,-68,29,10,-71,-62,-62,-62,-56,5,-57,-54,-65,54,-60,-46,53,-57,-80,-66; MA /M: SY='N'; M=-63,-75,61,46,-81,-62,-50,-81,48,-81,-72,80,-65,-45,-47,-52,-54,-78,-88,-70; MA /M: SY='P'; M=-68,-94,-73,-60,-70,-69,-76,-74,-65,-81,-71,-78,116,-68,-76,-67,-64,-81,116,-62; MA /M: SY='K'; M=-62,42,-51,-48,-77,-65,-56,-76,86,-77,-66,64,-67,-46,2,-52,18,-72,-80,-68; MA /M: SY='G'; M=38,-69,-63,-68,-77,78,-70,-75,-65,-75,-68,-52,-65,-64,-72,-44,54,-66,-77,-73; MA /M: SY='K'; M=-63,-77,-55,-41,-79,-70,-58,-79,110,-78,-66,-48,-63,-39,-24,-57,-57,-75,-72,-65; MA /I: I=-23; MD=-58; MA /M: SY='Y'; M=-82,-91,-77,-78,34,-87,87,-73,-76,-66,-62,-72,-90,-70,-71,-76,-77,-77,-52,99; D=-23; MA /I: I=-23; MD=-58; MA /M: SY='S'; M=2,-77,-69,-71,-87,28,-73,-87,-71,-89,-81,-58,-76,-63,-75,82,-53,-78,-91,-80; D=-23; MA /I: I=-23; MD=-58; MA /M: SY='Q'; M=-65,43,-69,-56,-92,-12,-66,-88,20,-85,-75,-61,-78,83,-8,37,-65,-84,-88,-76; D=-23; MA /I: I=-23; MD=-58; MA /M: SY='K'; M=-67,-84,-63,-65,-90,42,-68,-92,60,-92,-81,51,-77,-60,-55,4,-66,-88,-89,-81; D=-23; MA /I: I=-23; MD=-58; MA /M: SY='A'; M=58,-75,-86,-79,-68,-75,-83,-52,-80,33,-55,-82,-85,-77,-82,-65,-66,30,-87,-74; D=-23; MA /I: I=-23; MI=0; MD=-58; IM=0; DM=-58; MA /M: SY='Y'; M=-96,-109,-94,-89,-62,-104,-69,-93,-69,-88,-82,-91,-107,-77,54,-91,-92,-94,-69,84; D=-23; MA /I: I=-23; DM=-58; MA /M: SY='E'; M=49,-95,-75,49,-106,-85,-89,-99,-79,-98,-92,-87,-88,-73,-86,-74,-82,-88,-104,-99; D=-23; MA /I: I=-23; DM=-58; MA /M: SY='L'; M=-78,-80,-95,-87,-51,-97,-79,-43,-89,81,-39,-95,-95,-82,-86,-88,-74,-50,-82,-64; D=-23; MA /I: I=-23; DM=-58; MA /M: SY='K'; M=-73,-83,-80,-72,-67,-89,-77,34,49,26,38,-73,-81,-68,-62,-73,21,-54,-85,-69; D=-23; MA /I: I=-23; DM=-58; MA /M: SY='R'; M=-76,-92,-71,-58,-88,-85,-65,-92,62,-87,-76,-64,-81,-51,85,-70,-73,-86,-85,-74; D=-23; MA /I: I=-23; DM=-58; MA /M: SY='E'; M=-69,-87,-65,50,-76,40,-72,-72,-68,32,-64,-71,-78,30,-73,-69,-74,-74,-85,-77; D=-23; MA /I: I=-23; DM=-58; MA /M: SY='Y'; M=-67,-77,-75,-70,-39,-82,-55,37,-56,34,-43,-71,-80,-60,53,-68,-63,4,-54,85; MA /M: SY='G'; M=-57,-76,-55,-62,-79,71,-57,-85,-46,-82,-70,64,-71,-53,67,-51,-61,-80,-79,-71; MA /M: SY='G'; M=-49,-77,-64,-76,-83,103,-71,-91,-70,-86,-75,-50,-68,-67,-77,-49,-68,-84,-74,-78; MA /I: E1=0; IE=-380; DE=-380; NR /RELEASE=2024_02,571282; NR /TOTAL=42(42); /POSITIVE=42(42); /UNKNOWN=0(0); /FALSE_POS=0(0); NR /FALSE_NEG=0; /PARTIAL=0; CC /MATRIX_TYPE=protein_domain; CC /SCALING_DB=reversed; CC /AUTHOR=CJA_Sigrist; CC /TAXO-RANGE=????V; /MAX-REPEAT=1; CC /FT_KEY=DOMAIN; /FT_DESC=BetaCoV Nsp1 C-terminal; CC /VERSION=1; DR P0C6W1 , R1AB_BC133 , T; P0C6V9 , R1AB_BC279 , T; DR P0C6W2 , R1AB_BCHK3 , T; P0C6W3 , R1AB_BCHK4 , T; DR P0C6W4 , R1AB_BCHK5 , T; P0C6W5 , R1AB_BCHK9 , T; DR P0C6W6 , R1AB_BCRP3 , T; P0C6W7 , R1AB_CVBEN , T; DR P0C6W8 , R1AB_CVBLU , T; P0C6W9 , R1AB_CVBM , T; DR P0C6X0 , R1AB_CVBQ , T; P0C6X2 , R1AB_CVHN1 , T; DR P0C6X3 , R1AB_CVHN2 , T; P0C6X4 , R1AB_CVHN5 , T; DR P0C6X6 , R1AB_CVHOC , T; P0C6X8 , R1AB_CVM2 , T; DR P0C6X9 , R1AB_CVMA5 , T; P0C6Y0 , R1AB_CVMJH , T; DR K9N7C7 , R1AB_MERS1 , T; P0C6X7 , R1AB_SARS , T; DR P0DTD1 , R1AB_SARS2 , T; P0C6F7 , R1A_BC133 , T; DR P0C6F5 , R1A_BC279 , T; P0C6F8 , R1A_BCHK3 , T; DR P0C6T4 , R1A_BCHK4 , T; P0C6T5 , R1A_BCHK5 , T; DR P0C6T6 , R1A_BCHK9 , T; P0C6T7 , R1A_BCRP3 , T; DR P0C6T8 , R1A_CVBEN , T; P0C6T9 , R1A_CVBLU , T; DR P0C6U0 , R1A_CVBM , T; P0C6U1 , R1A_CVBQ , T; DR P0C6U3 , R1A_CVHN1 , T; P0C6U4 , R1A_CVHN2 , T; DR P0C6U5 , R1A_CVHN5 , T; P0C6U7 , R1A_CVHOC , T; DR P0C6U9 , R1A_CVM2 , T; P0C6V0 , R1A_CVMA5 , T; DR P0C6V1 , R1A_CVMJH , T; K9N638 , R1A_MERS1 , T; DR P0C6U8 , R1A_SARS , T; P0DTC1 , R1A_SARS2 , T; 3D 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 7JQB; 3D 7JQC; 7K3N; 7K5I; 8AOU; 8PPL; PR PRU01308; DO PDOC51962; //