PROSITE logo
Black ribbon
We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE documentation PDOC51025
PWI domain profile


View entry in original PROSITE document format
View entry in raw text format (no links)
PURL: https://purl.expasy.org/prosite/documentation/PDOC51025

Description

The PWI domain, named after a highly conserved PWI tri-peptide located within its N-terminal region, is a ~80 amino acid module, which is found either at the N-terminus or at the C-terminus of eukaryotic proteins involved in pre-mRNA processing [1]. It is found in association with other domains such as RRM (see <PDOC00030>) and RS. The PWI domain is a RNA/DNA-binding domain that has an equal preference for single- and double-stranded nucleic acids and is likely to have multiple important functions in pre-mRNA processing [2].

The PWI domain is a soluble, globular and independently folded domain which consists of a four-helix bundle, with structured N- and C-terminal elements (see <PDB:1MP1>) [2].

Some proteins known to contain a PWI domain are listed below:

  • Metazoan proteins homologous to SR-related nuclear matrix protein of 160 kD (SRm160).
  • Mammalian splicing factor PRP3.

The profile we developed covers the entire PWI domain.

Last update:

February 2007 / First entry.

-------------------------------------------------------------------------------


Technical section

PROSITE method (with tools and information) covered by this documentation:

PWI, PS51025; PWI domain profile  (MATRIX)


References

1AuthorsBlencowe B.J. Ouzounis C.A.
TitleThe PWI motif: a new protein domain in splicing factors.
SourceTrends Biochem. Sci. 24:179-180(1999).
PubMed ID10322432

2AuthorsSzymczyna B.R. Bowman J. McCracken S. Pineda-Lucena A. Lu Y. Cox B. Lambermon M. Graveley B.R. Arrowsmith C.H. Blencowe B.J.
TitleStructure and function of the PWI motif: a novel nucleic acid-binding domain that facilitates pre-mRNA processing.
SourceGenes Dev. 17:461-475(2003).
PubMed ID12600940
DOI10.1101/gad.1060403



PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.