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PROSITE documentation PDOC51494

SpoIVB peptidase domain profile





Description

The protein SpoIVB is a serine peptidase that plays a central role in a regulatory checkpoint (the sigma-K checkpoint) which coordinates gene expression during the later stages of spore formation in Bacillus subtilis. SpoIVB signal by transiting a membrane, undergoing self cleavage, and then by an unknown mechanism activating a zinc metalloprotease, SpoIVFB, which cleaves pro-sigma-K to its active form, sigma-K, in the outer mother cell chamber of the developing cell [E1]. Homologues of SpoIVB proteins have been identified in a number of spore-forming organisms. SpoIVB carries a single PDZ domain (see <PDOC50106>) and a 160-amino-acid residue catalytic serine peptidase domain at the carboxyl terminus of the protein. His, Asp and Ser residues form the catalytic triad of the SpoIVB serine peptidase domain [1,2]. The SpoIVB peptidase domain forms peptidase family S55 of clan PA(S) [2] [E1].

For SpoIVB to cleave another SpoIVB molecule in trans it must target a specific region at the COOH terminus of the SpoIVB peptidase domain. This region carries a Thr-His-Val motif identical to the classical PDZ recognition motif ([ST]-X-V) normally found at the extreme COOH terminus of PDZ-recognized proteins [2].

The profile we developed covers the entire SpoIVB peptidase domain.

Last update:

May 2011 / Text revised.

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Technical section

PROSITE method (with tools and information) covered by this documentation:

SPOIVB, PS51494; SpoIVB peptidase domain profile  (MATRIX)


References

1AuthorsHoa N.T. Brannigan J.A. Cutting S.M.
TitleThe Bacillus subtilis signaling protein SpoIVB defines a new family of serine peptidases.
SourceJ. Bacteriol. 184:191-199(2002).
PubMed ID11741860

2AuthorsDong T.C. Cutting S.M.
TitleThe PDZ domain of the SpoIVB transmembrane signaling protein enables cis-trans interactions involving multiple partners leading to the activation of the pro-sigmaK processing complex in Bacillus subtilis.
SourceJ. Biol. Chem. 279:43468-43478(2004).
PubMed ID15292188
DOI10.1074/jbc.M407048200

E1Titlehttps://www.ebi.ac.uk/merops/cgi-bin/famsum?family=s55



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